Wall clock time and date at job start Tue Mar 9 2021 13:45:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86304 * 109.47349 * 2 1 4 4 C 1.50703 * 109.47055 * 240.00160 * 2 1 3 5 5 C 1.38178 * 120.00392 * 105.00243 * 4 2 1 6 6 C 1.38249 * 120.10518 * 180.02562 * 5 4 2 7 7 C 1.38364 * 120.11475 * 359.97363 * 6 5 4 8 8 Cl 1.73594 * 119.99799 * 180.02562 * 7 6 5 9 9 C 1.38437 * 120.00391 * 0.02562 * 7 6 5 10 10 F 1.35094 * 120.05311 * 179.97438 * 9 7 6 11 11 C 1.38681 * 120.00430 * 284.72689 * 4 2 1 12 12 O 1.35960 * 120.05424 * 359.97438 * 11 4 2 13 13 C 1.42892 * 117.00054 * 90.00278 * 12 11 4 14 14 C 1.53006 * 109.47259 * 180.02562 * 13 12 11 15 15 H 1.08990 * 112.84784 * 45.32813 * 14 13 12 16 16 C 1.53780 * 113.61390 * 176.52877 * 14 13 12 17 17 C 1.53782 * 87.08002 * 139.97708 * 16 14 13 18 18 H 1.09001 * 113.61367 * 89.11194 * 17 16 14 19 19 O 1.42900 * 113.61512 * 219.93389 * 17 16 14 20 20 C 1.53781 * 113.61108 * 274.13536 * 14 13 12 21 21 H 0.96708 * 114.00101 * 59.99198 * 1 2 3 22 22 H 1.09002 * 109.46984 * 120.00249 * 2 1 3 23 23 H 1.48501 * 109.99652 * 59.99990 * 3 2 1 24 24 H 1.48494 * 110.00064 * 181.31859 * 3 2 1 25 25 H 1.08003 * 119.94724 * 359.97010 * 5 4 2 26 26 H 1.08001 * 119.94396 * 179.97438 * 6 5 4 27 27 H 1.09007 * 109.47169 * 299.99724 * 13 12 11 28 28 H 1.08998 * 109.47666 * 59.99986 * 13 12 11 29 29 H 1.08994 * 113.61258 * 254.52451 * 16 14 13 30 30 H 1.09005 * 113.61732 * 25.34756 * 16 14 13 31 31 H 0.96704 * 113.99780 * 180.02562 * 19 17 16 32 32 H 1.09004 * 113.61180 * 334.56572 * 20 14 13 33 33 H 1.08994 * 113.61760 * 105.46604 * 20 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4536 0.0165 -2.2832 6 6 2.9146 -0.6330 -3.4132 7 6 2.8549 -2.0130 -3.4937 8 17 3.4351 -2.8255 -4.9138 9 6 2.3325 -2.7458 -2.4418 10 9 2.2732 -4.0932 -2.5195 11 6 1.8746 -2.0941 -1.3042 12 8 1.3665 -2.8109 -0.2666 13 6 -0.0371 -3.0780 -0.2884 14 6 -0.4212 -3.8890 0.9509 15 1 0.0248 -3.5001 1.8662 16 6 -1.9308 -4.1584 1.0672 17 6 -1.5617 -5.5716 1.5485 18 1 -1.4272 -5.6440 2.6278 19 8 -2.4112 -6.5946 1.0253 20 6 -0.2414 -5.4060 0.7743 21 1 -0.3934 0.4418 -0.7650 22 1 1.7923 -0.5139 0.8900 23 1 1.5615 2.4678 1.2085 24 1 3.5346 1.7702 -0.0321 25 1 2.5011 1.0938 -2.2234 26 1 3.3220 -0.0622 -4.2346 27 1 -0.5861 -2.1363 -0.2903 28 1 -0.2853 -3.6451 -1.1855 29 1 -2.4249 -3.5534 1.8274 30 1 -2.4520 -4.1440 0.1100 31 1 -2.1842 -7.4856 1.3248 32 1 -0.2996 -5.7347 -0.2634 33 1 0.6263 -5.8068 1.2982 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_18323484_11354858.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:16 Heat of formation + Delta-G solvation = -111.609648 kcal Electronic energy + Delta-G solvation = -21269.336918 eV Core-core repulsion = 17624.633678 eV Total energy + Delta-G solvation = -3644.703240 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.060 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -50.19704 -41.45139 -40.36199 -38.70340 -37.94840 -37.27208 -36.04803 -32.48406 -31.48865 -29.06961 -26.93019 -26.78421 -24.19052 -23.42280 -22.94191 -20.66274 -19.48650 -18.78789 -18.63133 -18.40351 -17.54974 -17.24484 -16.71473 -16.43161 -16.21261 -16.04586 -15.80986 -15.56444 -14.92073 -14.72801 -14.37742 -14.07597 -14.03865 -13.60587 -13.54367 -13.49004 -12.72046 -12.59194 -12.45395 -12.22627 -12.10026 -12.02785 -11.99001 -11.46456 -11.00194 -10.77875 -10.49606 -9.95019 -9.93698 -5.00469 -0.41482 -0.31030 0.78134 1.25033 1.68648 1.90822 2.01221 2.41811 2.81186 3.27139 3.36690 3.43535 3.50988 3.53898 3.64103 3.75037 3.84672 3.89071 4.09202 4.20101 4.27037 4.32613 4.49657 4.58591 4.62670 4.68542 4.69447 4.73992 4.81759 4.92482 4.96887 5.09016 5.24819 5.34474 6.20814 6.74631 6.82015 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.075 4.075 3 Si 0.798 3.202 4 C -0.109 4.109 5 C -0.084 4.084 6 C -0.073 4.073 7 C -0.069 4.069 8 Cl -0.047 7.047 9 C 0.061 3.939 10 F -0.136 7.136 11 C 0.084 3.916 12 O -0.337 6.337 13 C 0.078 3.922 14 C -0.102 4.102 15 H 0.105 0.895 16 C -0.116 4.116 17 C 0.077 3.923 18 H 0.100 0.900 19 O -0.580 6.580 20 C -0.165 4.165 21 H 0.397 0.603 22 H 0.102 0.898 23 H -0.299 1.299 24 H -0.282 1.282 25 H 0.188 0.812 26 H 0.184 0.816 27 H 0.088 0.912 28 H 0.042 0.958 29 H 0.091 0.909 30 H 0.085 0.915 31 H 0.395 0.605 32 H 0.075 0.925 33 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.835 5.855 -1.093 6.014 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.183 4.183 3 Si 0.702 3.298 4 C -0.111 4.111 5 C -0.102 4.102 6 C -0.091 4.091 7 C -0.097 4.097 8 Cl -0.018 7.018 9 C 0.041 3.959 10 F -0.115 7.115 11 C 0.038 3.962 12 O -0.255 6.255 13 C 0.005 3.995 14 C -0.121 4.121 15 H 0.123 0.877 16 C -0.154 4.154 17 C 0.018 3.982 18 H 0.118 0.882 19 O -0.388 6.388 20 C -0.203 4.203 21 H 0.247 0.753 22 H 0.119 0.881 23 H -0.227 1.227 24 H -0.208 1.208 25 H 0.205 0.795 26 H 0.201 0.799 27 H 0.106 0.894 28 H 0.060 0.940 29 H 0.110 0.890 30 H 0.103 0.897 31 H 0.245 0.755 32 H 0.094 0.906 33 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -0.431 6.401 -0.392 6.427 hybrid contribution 0.481 -2.038 0.220 2.106 sum 0.051 4.363 -0.172 4.366 Atomic orbital electron populations 1.86514 1.16492 1.81868 1.50565 1.25311 0.85813 1.11279 0.95889 0.93906 0.77753 0.72845 0.85257 1.20935 1.00140 0.91582 0.98394 1.21339 0.96325 1.01664 0.90839 1.21428 0.97503 0.89998 1.00173 1.21190 1.04418 0.94580 0.89517 1.98419 1.86832 1.79588 1.36977 1.18201 1.05021 0.77583 0.95113 1.91503 1.94361 1.29144 1.96461 1.18545 1.00087 0.90575 0.86958 1.85998 1.25488 1.72545 1.41445 1.22991 0.78396 1.00445 0.97668 1.22259 0.96944 0.94657 0.98223 0.87666 1.23023 0.94570 0.94798 1.02989 1.23427 0.89266 0.88158 0.97342 0.88181 1.86478 1.57924 1.20024 1.74419 1.23767 0.99023 0.96071 1.01471 0.75275 0.88082 1.22657 1.20827 0.79540 0.79913 0.89443 0.93964 0.89050 0.89681 0.75507 0.90618 0.90898 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.08 10.88 -148.98 -1.62 0.46 16 2 C -0.07 0.22 2.38 71.24 0.17 0.39 16 3 Si 0.80 -5.25 29.92 68.60 2.05 -3.20 16 4 C -0.11 0.19 5.27 -19.77 -0.10 0.09 16 5 C -0.08 0.61 8.65 22.26 0.19 0.81 16 6 C -0.07 0.38 9.83 22.30 0.22 0.60 16 7 C -0.07 -0.14 6.32 22.35 0.14 0.00 16 8 Cl -0.05 -0.16 28.61 -2.72 -0.08 -0.24 16 9 C 0.06 0.40 7.28 22.47 0.16 0.56 16 10 F -0.14 -1.52 16.68 44.97 0.75 -0.77 16 11 C 0.08 0.40 5.70 22.53 0.13 0.53 16 12 O -0.34 -2.48 9.25 -93.11 -0.86 -3.34 16 13 C 0.08 0.31 5.86 71.98 0.42 0.73 16 14 C -0.10 -0.23 4.00 -10.27 -0.04 -0.27 16 15 H 0.11 0.19 8.14 -2.39 -0.02 0.17 16 16 C -0.12 -0.13 7.48 31.12 0.23 0.10 16 17 C 0.08 0.09 5.21 31.18 0.16 0.26 16 18 H 0.10 -0.23 8.14 -2.39 -0.02 -0.25 16 19 O -0.58 -2.04 13.68 -148.98 -2.04 -4.08 16 20 C -0.17 -0.49 7.48 31.18 0.23 -0.26 16 21 H 0.40 -5.05 8.70 -74.05 -0.64 -5.69 16 22 H 0.10 0.11 7.82 -2.39 -0.02 0.09 16 23 H -0.30 -0.50 7.11 99.48 0.71 0.20 16 24 H -0.28 0.45 7.11 99.48 0.71 1.16 16 25 H 0.19 -2.84 5.12 -2.91 -0.01 -2.86 16 26 H 0.18 -2.06 8.06 -2.91 -0.02 -2.08 16 27 H 0.09 0.17 6.06 -2.38 -0.01 0.15 16 28 H 0.04 0.24 7.88 -2.39 -0.02 0.22 16 29 H 0.09 -0.11 8.14 -2.39 -0.02 -0.13 16 30 H 0.08 0.23 8.10 -2.38 -0.02 0.21 16 31 H 0.39 -1.81 9.12 -74.05 -0.68 -2.48 16 32 H 0.08 0.44 7.92 -2.39 -0.02 0.43 16 33 H 0.07 0.19 8.14 -2.39 -0.02 0.17 16 Total: 0.00 -18.33 300.04 0.01 -18.32 By element: Atomic # 1 Polarization: -10.58 SS G_CDS: -0.11 Total: -10.69 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: 1.92 Total: 3.53 kcal Atomic # 8 Polarization: -2.44 SS G_CDS: -4.52 Total: -6.95 kcal Atomic # 9 Polarization: -1.52 SS G_CDS: 0.75 Total: -0.77 kcal Atomic # 14 Polarization: -5.25 SS G_CDS: 2.05 Total: -3.20 kcal Atomic # 17 Polarization: -0.16 SS G_CDS: -0.08 Total: -0.24 kcal Total: -18.33 0.01 -18.32 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_18323484_11354858.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.293 kcal (2) G-P(sol) polarization free energy of solvation -18.330 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.623 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.014 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.316 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds