Wall clock time and date at job start Tue Mar 9 2021 13:45:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53001 * 109.47071 * 2 1 4 4 C 1.52995 * 109.47245 * 240.00038 * 2 1 3 5 5 O 1.45199 * 109.46877 * 119.99303 * 2 1 3 6 6 C 1.34644 * 116.99359 * 60.00721 * 5 2 1 7 7 O 1.21503 * 120.00537 * 359.97438 * 6 5 2 8 8 N 1.34783 * 119.99458 * 179.97438 * 6 5 2 9 9 C 1.46502 * 119.99683 * 179.97438 * 8 6 5 10 10 H 1.08999 * 112.85025 * 23.80911 * 9 8 6 11 11 C 1.53779 * 113.61301 * 154.99921 * 9 8 6 12 12 C 1.53787 * 87.07963 * 89.11687 * 11 9 8 13 13 H 1.08994 * 113.61447 * 270.88515 * 12 11 9 14 14 C 1.52997 * 113.61251 * 139.97890 * 12 11 9 15 15 O 1.42902 * 109.47204 * 175.00256 * 14 12 11 16 16 C 1.35957 * 117.00129 * 180.02562 * 15 14 12 17 17 C 1.38867 * 120.05567 * 90.00263 * 16 15 14 18 18 F 1.35099 * 120.05442 * 359.97353 * 17 16 15 19 19 C 1.38438 * 119.89525 * 180.02562 * 17 16 15 20 20 Cl 1.73604 * 119.99986 * 179.97438 * 19 17 16 21 21 C 1.38363 * 120.00634 * 359.97438 * 19 17 16 22 22 C 1.38255 * 120.11225 * 359.97438 * 21 19 17 23 23 C 1.38182 * 120.10296 * 359.76936 * 22 21 19 24 24 C 1.50699 * 120.00163 * 180.27876 * 23 22 21 25 25 O 1.42899 * 109.47425 * 105.23012 * 24 23 22 26 26 Si 1.86301 * 109.47253 * 345.22672 * 24 23 22 27 27 C 1.53779 * 113.61564 * 252.49989 * 9 8 6 28 28 H 1.08997 * 109.47413 * 299.99974 * 1 2 3 29 29 H 1.09006 * 109.47309 * 60.00176 * 1 2 3 30 30 H 1.09003 * 109.47055 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47509 * 180.02562 * 3 2 1 32 32 H 1.09006 * 109.46910 * 300.00068 * 3 2 1 33 33 H 1.09009 * 109.47352 * 59.99606 * 3 2 1 34 34 H 1.09001 * 109.47094 * 299.99473 * 4 2 1 35 35 H 1.08998 * 109.47196 * 60.00001 * 4 2 1 36 36 H 1.08999 * 109.46986 * 180.02562 * 4 2 1 37 37 H 0.96996 * 119.99920 * 359.97438 * 8 6 5 38 38 H 1.08997 * 113.61646 * 334.57319 * 11 9 8 39 39 H 1.09000 * 113.61527 * 203.66590 * 11 9 8 40 40 H 1.08998 * 109.47573 * 295.00161 * 14 12 11 41 41 H 1.09003 * 109.47157 * 55.00680 * 14 12 11 42 42 H 1.08001 * 119.94143 * 180.02562 * 21 19 17 43 43 H 1.08001 * 119.94729 * 180.02562 * 22 21 19 44 44 H 1.09007 * 109.46857 * 225.22824 * 24 23 22 45 45 H 0.96700 * 113.99968 * 299.99874 * 25 24 23 46 46 H 1.48496 * 110.00015 * 180.02562 * 26 24 23 47 47 H 1.48498 * 109.99892 * 301.32169 * 26 24 23 48 48 H 1.09002 * 113.61557 * 156.33711 * 27 9 8 49 49 H 1.09004 * 113.61501 * 25.43131 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0140 -0.6843 1.1856 6 6 1.6522 -1.9722 1.3384 7 8 0.9510 -2.5094 0.5041 8 7 2.0680 -2.6656 2.4168 9 6 1.6739 -4.0667 2.5833 10 1 1.4210 -4.5503 1.6398 11 6 2.6474 -4.8814 3.4514 12 6 1.8073 -4.4456 4.6636 13 1 2.1370 -3.5067 5.1084 14 6 1.6018 -5.5547 5.6973 15 8 0.9143 -5.0259 6.8330 16 6 0.6512 -5.8872 7.8515 17 6 1.5698 -6.0489 8.8803 18 9 2.7265 -5.3510 8.8705 19 6 1.2988 -6.9272 9.9155 20 17 2.4455 -7.1320 11.2027 21 6 0.1141 -7.6419 9.9243 22 6 -0.8011 -7.4803 8.9007 23 6 -0.5377 -6.6009 7.8679 24 6 -1.5396 -6.4219 6.7566 25 8 -2.2138 -5.1726 6.9197 26 14 -2.7816 -7.8095 6.8107 27 6 0.6282 -4.2853 3.6895 28 1 -0.3634 0.5138 0.8899 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1299 1.4426 -0.0005 32 1 1.6766 1.9563 -0.8900 33 1 1.6766 1.9564 0.8900 34 1 1.6768 -1.7489 -1.2492 35 1 1.6767 -0.2074 -2.1392 36 1 3.1300 -0.7216 -1.2489 37 1 2.6280 -2.2368 3.0826 38 1 3.6626 -4.4849 3.4585 39 1 2.6120 -5.9536 3.2583 40 1 1.0111 -6.3575 5.2564 41 1 2.5707 -5.9453 6.0087 42 1 -0.0964 -8.3266 10.7327 43 1 -1.7252 -8.0393 8.9105 44 1 -1.0234 -6.4336 5.7966 45 1 -2.6958 -5.0917 7.7541 46 1 -3.7750 -7.6448 5.7193 47 1 -2.0895 -9.1162 6.6741 48 1 0.0408 -5.1946 3.5615 49 1 0.0134 -3.4075 3.8888 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_18323484_15734082.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:25 Heat of formation + Delta-G solvation = -140.490117 kcal Electronic energy + Delta-G solvation = -34319.546570 eV Core-core repulsion = 29383.568641 eV Total energy + Delta-G solvation = -4935.977929 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.133 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -50.17108 -42.03312 -41.42199 -40.46966 -38.78862 -38.01745 -37.81717 -37.21365 -35.42116 -34.17125 -32.46057 -31.45801 -29.25970 -28.41400 -28.34559 -26.99375 -26.74417 -24.78330 -23.92391 -23.19778 -22.98898 -21.23246 -20.40457 -19.53238 -19.34018 -18.76724 -18.42264 -17.71428 -17.52330 -17.39193 -17.24798 -16.76346 -16.55476 -16.31797 -16.22990 -15.93213 -15.57525 -15.53631 -15.44928 -15.04808 -14.83965 -14.58418 -14.38150 -14.15047 -13.99098 -13.81973 -13.57530 -13.56454 -13.39655 -13.30353 -13.07823 -12.96462 -12.91740 -12.56483 -12.51745 -12.38011 -12.31556 -12.15485 -12.09732 -11.84669 -11.75679 -11.58357 -11.44969 -11.18432 -11.08461 -10.45778 -10.26615 -9.93675 -9.92041 -5.02133 -0.39986 -0.29324 0.79639 1.06393 1.23377 1.65343 1.65467 1.92662 1.98387 2.39708 2.82829 3.04128 3.31214 3.36195 3.43232 3.53745 3.66328 3.68506 3.69466 3.74399 3.75656 3.85091 3.89718 4.08211 4.09880 4.26908 4.32636 4.38090 4.42861 4.53767 4.55252 4.56951 4.63607 4.66430 4.67947 4.71933 4.77409 4.82602 4.83068 4.83326 4.90867 4.95924 4.97812 4.99867 5.11222 5.22582 5.25549 5.28725 5.40577 5.54438 6.21503 6.29880 6.76695 7.25587 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.647 3.353 7 O -0.591 6.591 8 N -0.685 5.685 9 C 0.133 3.867 10 H 0.099 0.901 11 C -0.119 4.119 12 C -0.103 4.103 13 H 0.098 0.902 14 C 0.071 3.929 15 O -0.331 6.331 16 C 0.086 3.914 17 C 0.065 3.935 18 F -0.134 7.134 19 C -0.069 4.069 20 Cl -0.047 7.047 21 C -0.073 4.073 22 C -0.085 4.085 23 C -0.111 4.111 24 C -0.075 4.075 25 O -0.547 6.547 26 Si 0.788 3.212 27 C -0.141 4.141 28 H 0.060 0.940 29 H 0.088 0.912 30 H 0.063 0.937 31 H 0.070 0.930 32 H 0.100 0.900 33 H 0.068 0.932 34 H 0.063 0.937 35 H 0.088 0.912 36 H 0.062 0.938 37 H 0.416 0.584 38 H 0.093 0.907 39 H 0.118 0.882 40 H 0.068 0.932 41 H 0.060 0.940 42 H 0.183 0.817 43 H 0.186 0.814 44 H 0.100 0.900 45 H 0.395 0.605 46 H -0.300 1.300 47 H -0.271 1.271 48 H 0.099 0.901 49 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.103 -3.237 3.002 4.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.401 3.599 7 O -0.482 6.482 8 N -0.344 5.344 9 C 0.028 3.972 10 H 0.117 0.883 11 C -0.157 4.157 12 C -0.122 4.122 13 H 0.116 0.884 14 C -0.002 4.002 15 O -0.248 6.248 16 C 0.041 3.959 17 C 0.044 3.956 18 F -0.113 7.113 19 C -0.097 4.097 20 Cl -0.018 7.018 21 C -0.091 4.091 22 C -0.103 4.103 23 C -0.112 4.112 24 C -0.183 4.183 25 O -0.355 6.355 26 Si 0.691 3.309 27 C -0.180 4.180 28 H 0.079 0.921 29 H 0.107 0.893 30 H 0.082 0.918 31 H 0.089 0.911 32 H 0.118 0.882 33 H 0.087 0.913 34 H 0.082 0.918 35 H 0.107 0.893 36 H 0.081 0.919 37 H 0.253 0.747 38 H 0.111 0.889 39 H 0.136 0.864 40 H 0.086 0.914 41 H 0.078 0.922 42 H 0.200 0.800 43 H 0.202 0.798 44 H 0.118 0.882 45 H 0.245 0.755 46 H -0.228 1.228 47 H -0.197 1.197 48 H 0.117 0.883 49 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -2.403 -3.761 1.624 4.749 hybrid contribution 1.388 0.705 0.090 1.560 sum -1.015 -3.056 1.715 3.648 Atomic orbital electron populations 1.22479 0.94093 1.03670 1.03526 1.22379 0.94444 0.92633 0.81488 1.21899 1.02499 0.90814 1.04275 1.22471 1.01679 1.02236 0.97287 1.86317 1.71563 1.23178 1.47419 1.18289 0.78547 0.80814 0.82296 1.90900 1.42038 1.70895 1.44373 1.44382 1.54851 1.12046 1.23147 1.21824 0.96794 0.79260 0.99278 0.88303 1.23333 0.98695 1.01809 0.91849 1.22582 0.97739 0.98915 0.92931 0.88371 1.23002 0.95872 0.96811 0.84551 1.86133 1.77391 1.34653 1.26604 1.18486 0.93177 0.94681 0.89570 1.18136 0.84002 0.95875 0.97585 1.91509 1.46252 1.77109 1.96393 1.21187 0.95546 1.01113 0.91831 1.98421 1.59306 1.96332 1.47715 1.21410 0.89593 0.97969 1.00145 1.21317 1.00543 0.96757 0.91646 1.20907 0.95209 0.96039 0.99066 1.25345 0.98312 0.97367 0.97292 1.86563 1.68995 1.35143 1.44815 0.93798 0.77176 0.72869 0.87046 1.23507 0.96604 1.02830 0.95053 0.92096 0.89284 0.91846 0.91111 0.88160 0.91281 0.91784 0.89329 0.91860 0.74738 0.88879 0.86360 0.91411 0.92156 0.80008 0.79764 0.88231 0.75523 1.22772 1.19739 0.88257 0.92246 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.87 8.37 71.98 0.60 -0.27 16 2 C 0.13 0.55 1.13 -10.79 -0.01 0.54 16 3 C -0.14 0.12 8.85 71.98 0.64 0.75 16 4 C -0.18 -0.75 8.37 71.98 0.60 -0.15 16 5 O -0.37 -2.70 9.94 -55.53 -0.55 -3.26 16 6 C 0.65 5.53 8.06 129.79 1.05 6.58 16 7 O -0.59 -8.02 11.48 19.83 0.23 -7.79 16 8 N -0.69 -1.77 5.27 -567.60 -2.99 -4.76 16 9 C 0.13 0.07 4.32 45.52 0.20 0.27 16 10 H 0.10 0.32 7.46 -2.39 -0.02 0.30 16 11 C -0.12 0.55 7.39 31.12 0.23 0.78 16 12 C -0.10 0.14 3.89 -10.27 -0.04 0.10 16 13 H 0.10 0.00 8.14 -2.39 -0.02 -0.02 16 14 C 0.07 0.02 5.68 71.98 0.41 0.42 16 15 O -0.33 -1.81 9.29 -93.06 -0.86 -2.68 16 16 C 0.09 0.29 5.70 22.53 0.13 0.42 16 17 C 0.06 0.31 7.28 22.47 0.16 0.47 16 18 F -0.13 -1.20 16.68 44.97 0.75 -0.45 16 19 C -0.07 -0.06 6.32 22.35 0.14 0.08 16 20 Cl -0.05 -0.11 28.62 -2.72 -0.08 -0.19 16 21 C -0.07 0.43 9.83 22.30 0.22 0.65 16 22 C -0.09 0.65 8.66 22.26 0.19 0.84 16 23 C -0.11 0.24 5.27 -19.77 -0.10 0.14 16 24 C -0.07 0.19 2.38 71.24 0.17 0.36 16 25 O -0.55 0.15 12.88 -148.98 -1.92 -1.77 16 26 Si 0.79 -5.00 29.91 68.60 2.05 -2.95 16 27 C -0.14 -0.12 7.43 31.12 0.23 0.12 16 28 H 0.06 0.27 8.14 -2.39 -0.02 0.25 16 29 H 0.09 0.09 8.14 -2.38 -0.02 0.07 16 30 H 0.06 0.65 5.88 -2.39 -0.01 0.63 16 31 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 32 H 0.10 -0.44 8.14 -2.38 -0.02 -0.46 16 33 H 0.07 -0.06 8.14 -2.38 -0.02 -0.08 16 34 H 0.06 0.60 5.88 -2.39 -0.01 0.59 16 35 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 36 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 37 H 0.42 -0.54 8.81 -92.71 -0.82 -1.36 16 38 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 39 H 0.12 -0.88 8.10 -2.39 -0.02 -0.90 16 40 H 0.07 -0.15 6.83 -2.39 -0.02 -0.17 16 41 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 42 H 0.18 -2.14 8.06 -2.91 -0.02 -2.16 16 43 H 0.19 -2.80 5.12 -2.91 -0.01 -2.81 16 44 H 0.10 -0.04 6.59 -2.38 -0.02 -0.06 16 45 H 0.39 -3.56 8.70 -74.06 -0.64 -4.20 16 46 H -0.30 -0.70 7.11 99.48 0.71 0.00 16 47 H -0.27 0.81 7.11 99.48 0.71 1.51 16 48 H 0.10 -0.06 7.90 -2.39 -0.02 -0.08 16 49 H 0.06 0.30 8.14 -2.39 -0.02 0.28 16 Total: 0.00 -21.91 416.09 1.02 -20.89 By element: Atomic # 1 Polarization: -8.72 SS G_CDS: -0.42 Total: -9.14 kcal Atomic # 6 Polarization: 7.28 SS G_CDS: 4.81 Total: 12.09 kcal Atomic # 7 Polarization: -1.77 SS G_CDS: -2.99 Total: -4.76 kcal Atomic # 8 Polarization: -12.39 SS G_CDS: -3.11 Total: -15.49 kcal Atomic # 9 Polarization: -1.20 SS G_CDS: 0.75 Total: -0.45 kcal Atomic # 14 Polarization: -5.00 SS G_CDS: 2.05 Total: -2.95 kcal Atomic # 17 Polarization: -0.11 SS G_CDS: -0.08 Total: -0.19 kcal Total: -21.91 1.02 -20.89 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_18323484_15734082.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.603 kcal (2) G-P(sol) polarization free energy of solvation -21.912 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.515 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.888 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds