Wall clock time and date at job start Tue Mar 9 2021 13:45:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53003 * 109.46957 * 2 1 4 4 C 1.52999 * 109.47170 * 240.00166 * 2 1 3 5 5 O 1.45198 * 109.47350 * 120.00121 * 2 1 3 6 6 C 1.34637 * 117.00157 * 59.99456 * 5 2 1 7 7 O 1.21517 * 119.99881 * 0.02562 * 6 5 2 8 8 N 1.34774 * 120.00072 * 180.02562 * 6 5 2 9 9 C 1.46504 * 119.99751 * 180.02562 * 8 6 5 10 10 H 1.08992 * 112.85090 * 23.80710 * 9 8 6 11 11 C 1.53780 * 113.61294 * 155.00440 * 9 8 6 12 12 C 1.53784 * 87.08352 * 140.06346 * 11 9 8 13 13 H 1.08995 * 113.61485 * 89.19856 * 12 11 9 14 14 C 1.52999 * 113.61246 * 220.02000 * 12 11 9 15 15 O 1.42905 * 109.46728 * 183.47079 * 14 12 11 16 16 C 1.35950 * 116.99802 * 179.97438 * 15 14 12 17 17 C 1.38868 * 120.05794 * 89.99708 * 16 15 14 18 18 F 1.35097 * 120.05313 * 359.97438 * 17 16 15 19 19 C 1.38441 * 119.89888 * 179.97438 * 17 16 15 20 20 Cl 1.73598 * 119.99898 * 180.02562 * 19 17 16 21 21 C 1.38360 * 120.00675 * 0.02562 * 19 17 16 22 22 C 1.38261 * 120.10878 * 359.97438 * 21 19 17 23 23 C 1.38179 * 120.10653 * 359.75257 * 22 21 19 24 24 C 1.50698 * 120.00536 * 180.27433 * 23 22 21 25 25 O 1.42903 * 109.46806 * 255.23152 * 24 23 22 26 26 Si 1.86300 * 109.47307 * 15.22780 * 24 23 22 27 27 C 1.53785 * 87.16833 * 334.60698 * 12 11 9 28 28 H 1.08999 * 109.47249 * 299.99767 * 1 2 3 29 29 H 1.09001 * 109.46837 * 60.00059 * 1 2 3 30 30 H 1.09003 * 109.46610 * 179.97438 * 1 2 3 31 31 H 1.09006 * 109.46844 * 179.97438 * 3 2 1 32 32 H 1.09001 * 109.47299 * 299.99658 * 3 2 1 33 33 H 1.08999 * 109.46951 * 60.00050 * 3 2 1 34 34 H 1.09003 * 109.47493 * 299.99629 * 4 2 1 35 35 H 1.09001 * 109.47425 * 60.00135 * 4 2 1 36 36 H 1.09006 * 109.47152 * 180.02562 * 4 2 1 37 37 H 0.96995 * 120.00214 * 0.02562 * 8 6 5 38 38 H 1.09004 * 113.61514 * 25.51434 * 11 9 8 39 39 H 1.08998 * 113.69255 * 254.62417 * 11 9 8 40 40 H 1.09000 * 109.47486 * 63.47017 * 14 12 11 41 41 H 1.09001 * 109.47362 * 303.46295 * 14 12 11 42 42 H 1.08002 * 119.94997 * 180.02562 * 21 19 17 43 43 H 1.07997 * 119.94477 * 180.02562 * 22 21 19 44 44 H 1.08993 * 109.47351 * 135.23020 * 24 23 22 45 45 H 0.96693 * 113.99940 * 59.99873 * 25 24 23 46 46 H 1.48502 * 109.99649 * 58.67904 * 26 24 23 47 47 H 1.48490 * 110.00112 * 180.02562 * 26 24 23 48 48 H 1.09002 * 113.61227 * 139.93863 * 27 12 11 49 49 H 1.08998 * 113.61561 * 270.83712 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3384 7 8 0.9515 -2.5097 0.5036 8 7 2.0673 -2.6654 2.4171 9 6 1.6740 -4.0669 2.5831 10 1 1.4224 -4.5505 1.6393 11 6 2.6470 -4.8809 3.4523 12 6 1.4095 -5.5560 4.0669 13 1 1.0864 -6.4476 3.5295 14 6 1.5194 -5.7793 5.5765 15 8 0.3636 -6.4807 6.0396 16 6 0.3034 -6.7614 7.3684 17 6 -0.2842 -5.8580 8.2442 18 9 -0.7965 -4.6984 7.7772 19 6 -0.3443 -6.1475 9.5967 20 17 -1.0788 -5.0203 10.6938 21 6 0.1811 -7.3351 10.0742 22 6 0.7662 -8.2347 9.2024 23 6 0.8236 -7.9530 7.8509 24 6 1.4563 -8.9380 6.9020 25 8 2.7444 -8.4603 6.5087 26 14 1.6377 -10.5875 7.7488 27 6 0.6243 -4.2895 3.6871 28 1 -0.3634 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1300 1.4425 0.0005 32 1 1.6767 1.9564 -0.8900 33 1 1.6766 1.9563 0.8900 34 1 1.6768 -1.7489 -1.2493 35 1 1.6767 -0.2074 -2.1393 36 1 3.1301 -0.7216 -1.2490 37 1 2.6263 -2.2363 3.0837 38 1 3.2109 -4.2747 4.1613 39 1 3.2783 -5.5624 2.8822 40 1 1.5869 -4.8162 6.0823 41 1 2.4117 -6.3668 5.7929 42 1 0.1334 -7.5601 11.1294 43 1 1.1751 -9.1611 9.5779 44 1 0.8254 -9.0497 6.0203 45 1 3.3597 -8.3373 7.2443 46 1 0.3084 -11.0801 8.1912 47 1 2.2611 -11.5675 6.8237 48 1 -0.3759 -4.4940 3.3050 49 1 0.6341 -3.5213 4.4603 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_18323484_15734236.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:29 Heat of formation + Delta-G solvation = -144.150546 kcal Electronic energy + Delta-G solvation = -34192.699369 eV Core-core repulsion = 29256.562712 eV Total energy + Delta-G solvation = -4936.136658 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.133 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -50.16439 -41.96034 -41.39298 -40.37411 -38.74286 -38.01345 -37.79130 -37.22444 -35.45413 -34.28206 -32.45067 -31.43903 -29.10535 -28.41271 -28.33916 -26.91402 -26.78795 -24.88856 -23.91974 -22.98119 -22.49686 -21.46497 -20.59542 -19.50830 -19.13749 -18.74844 -18.41167 -17.95011 -17.50750 -17.26663 -17.23280 -16.83361 -16.54447 -16.32663 -16.14608 -15.81548 -15.67394 -15.51813 -15.32486 -15.18100 -14.84854 -14.50901 -14.25171 -14.07474 -13.96560 -13.60281 -13.53649 -13.45947 -13.39887 -13.14888 -13.06555 -12.93661 -12.90866 -12.63387 -12.53094 -12.43230 -12.23993 -12.22670 -12.09344 -12.01551 -11.79374 -11.57529 -11.44103 -11.16030 -10.93896 -10.48036 -10.20624 -9.92445 -9.90335 -4.99591 -0.38799 -0.27788 0.80488 1.12118 1.26705 1.67815 1.69782 1.94739 2.02943 2.45601 2.84831 3.10885 3.36416 3.39802 3.47524 3.54855 3.65746 3.70052 3.71118 3.75176 3.77008 3.86824 3.90310 4.11264 4.23933 4.26657 4.35799 4.47583 4.53298 4.56944 4.60567 4.60815 4.64471 4.68472 4.72081 4.76131 4.76479 4.82197 4.83629 4.84356 4.90967 4.97827 4.99823 5.05573 5.15257 5.22717 5.27270 5.30328 5.44637 5.54793 6.26075 6.35036 6.78484 7.28801 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.127 3.873 3 C -0.137 4.137 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.643 3.357 7 O -0.595 6.595 8 N -0.689 5.689 9 C 0.137 3.863 10 H 0.105 0.895 11 C -0.114 4.114 12 C -0.099 4.099 13 H 0.100 0.900 14 C 0.078 3.922 15 O -0.339 6.339 16 C 0.087 3.913 17 C 0.062 3.938 18 F -0.136 7.136 19 C -0.070 4.070 20 Cl -0.049 7.049 21 C -0.074 4.074 22 C -0.084 4.084 23 C -0.109 4.109 24 C -0.071 4.071 25 O -0.544 6.544 26 Si 0.796 3.204 27 C -0.148 4.148 28 H 0.060 0.940 29 H 0.088 0.912 30 H 0.061 0.939 31 H 0.071 0.929 32 H 0.099 0.901 33 H 0.068 0.932 34 H 0.062 0.938 35 H 0.087 0.913 36 H 0.063 0.937 37 H 0.418 0.582 38 H 0.109 0.891 39 H 0.095 0.905 40 H 0.051 0.949 41 H 0.091 0.909 42 H 0.182 0.818 43 H 0.187 0.813 44 H 0.102 0.898 45 H 0.397 0.603 46 H -0.285 1.285 47 H -0.300 1.300 48 H 0.059 0.941 49 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.822 -2.041 5.952 9.281 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.090 3.910 3 C -0.194 4.194 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.397 3.603 7 O -0.486 6.486 8 N -0.348 5.348 9 C 0.033 3.967 10 H 0.123 0.877 11 C -0.152 4.152 12 C -0.118 4.118 13 H 0.119 0.881 14 C 0.004 3.996 15 O -0.257 6.257 16 C 0.042 3.958 17 C 0.042 3.958 18 F -0.114 7.114 19 C -0.097 4.097 20 Cl -0.020 7.020 21 C -0.092 4.092 22 C -0.102 4.102 23 C -0.110 4.110 24 C -0.180 4.180 25 O -0.352 6.352 26 Si 0.700 3.300 27 C -0.187 4.187 28 H 0.079 0.921 29 H 0.106 0.894 30 H 0.080 0.920 31 H 0.090 0.910 32 H 0.118 0.882 33 H 0.087 0.913 34 H 0.081 0.919 35 H 0.106 0.894 36 H 0.082 0.918 37 H 0.255 0.745 38 H 0.128 0.872 39 H 0.114 0.886 40 H 0.069 0.931 41 H 0.109 0.891 42 H 0.199 0.801 43 H 0.203 0.797 44 H 0.119 0.881 45 H 0.248 0.752 46 H -0.211 1.211 47 H -0.228 1.228 48 H 0.078 0.922 49 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 5.788 -2.940 4.816 8.083 hybrid contribution -0.889 1.221 -0.380 1.558 sum 4.899 -1.719 4.436 6.828 Atomic orbital electron populations 1.22479 0.94229 1.03595 1.03492 1.22364 0.94347 0.92686 0.81564 1.21894 1.02535 0.90756 1.04247 1.22473 1.01717 1.02194 0.97306 1.86311 1.71515 1.23271 1.47331 1.18432 0.78599 0.80807 0.82494 1.90903 1.42238 1.70960 1.44520 1.44758 1.54933 1.12198 1.22946 1.22569 0.96703 0.78682 0.98725 0.87693 1.23289 0.95718 0.98095 0.98072 1.22241 0.97943 0.97839 0.93769 0.88150 1.23031 0.87201 0.95486 0.93832 1.86008 1.44576 1.76833 1.18256 1.18488 1.00025 0.93356 0.83928 1.18175 1.02174 0.84019 0.91476 1.91506 1.84716 1.46105 1.89106 1.21191 1.04102 0.95719 0.88726 1.98420 1.81127 1.60716 1.61693 1.21410 0.95055 0.89629 1.03146 1.21329 0.98027 1.00419 0.90415 1.20912 0.99051 0.95132 0.95951 1.25234 0.86361 1.05161 1.01238 1.86511 1.21557 1.88685 1.38465 0.93975 0.81584 0.71380 0.83042 1.23624 0.98665 0.97881 0.98518 0.92075 0.89358 0.91961 0.91025 0.88246 0.91254 0.91884 0.89403 0.91776 0.74507 0.87227 0.88598 0.93071 0.89080 0.80097 0.79672 0.88086 0.75244 1.21132 1.22779 0.92197 0.89397 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.93 8.37 71.98 0.60 -0.33 16 2 C 0.13 0.56 1.13 -10.79 -0.01 0.55 16 3 C -0.14 0.13 8.85 71.98 0.64 0.77 16 4 C -0.18 -0.80 8.37 71.98 0.60 -0.20 16 5 O -0.37 -2.64 9.94 -55.46 -0.55 -3.19 16 6 C 0.64 5.58 8.06 129.79 1.05 6.62 16 7 O -0.60 -8.49 11.48 19.79 0.23 -8.26 16 8 N -0.69 -1.54 5.37 -567.32 -3.04 -4.58 16 9 C 0.14 0.16 4.24 45.58 0.19 0.36 16 10 H 0.11 0.51 7.46 -2.39 -0.02 0.49 16 11 C -0.11 0.49 7.40 31.12 0.23 0.72 16 12 C -0.10 0.06 4.00 -10.27 -0.04 0.01 16 13 H 0.10 0.09 8.14 -2.39 -0.02 0.07 16 14 C 0.08 0.02 5.86 71.98 0.42 0.45 16 15 O -0.34 -1.84 9.25 -92.99 -0.86 -2.70 16 16 C 0.09 0.27 5.70 22.53 0.13 0.40 16 17 C 0.06 0.31 7.28 22.47 0.16 0.48 16 18 F -0.14 -1.32 16.68 44.97 0.75 -0.57 16 19 C -0.07 -0.07 6.32 22.35 0.14 0.07 16 20 Cl -0.05 -0.13 28.61 -2.72 -0.08 -0.21 16 21 C -0.07 0.44 9.83 22.30 0.22 0.66 16 22 C -0.08 0.69 8.65 22.26 0.19 0.88 16 23 C -0.11 0.33 5.27 -19.77 -0.10 0.22 16 24 C -0.07 0.29 2.38 71.24 0.17 0.46 16 25 O -0.54 3.06 10.89 -148.98 -1.62 1.44 16 26 Si 0.80 -5.57 29.92 68.60 2.05 -3.52 16 27 C -0.15 -0.33 7.45 31.18 0.23 -0.09 16 28 H 0.06 0.28 8.14 -2.39 -0.02 0.27 16 29 H 0.09 0.12 8.14 -2.39 -0.02 0.10 16 30 H 0.06 0.67 5.88 -2.39 -0.01 0.66 16 31 H 0.07 -0.11 8.14 -2.38 -0.02 -0.13 16 32 H 0.10 -0.43 8.14 -2.39 -0.02 -0.45 16 33 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 34 H 0.06 0.63 5.88 -2.39 -0.01 0.61 16 35 H 0.09 0.07 8.14 -2.39 -0.02 0.05 16 36 H 0.06 0.22 8.14 -2.38 -0.02 0.20 16 37 H 0.42 -1.17 8.84 -92.71 -0.82 -1.99 16 38 H 0.11 -0.84 8.08 -2.38 -0.02 -0.86 16 39 H 0.10 -0.54 8.14 -2.39 -0.02 -0.55 16 40 H 0.05 0.02 7.87 -2.39 -0.02 0.00 16 41 H 0.09 -0.19 6.08 -2.39 -0.01 -0.20 16 42 H 0.18 -2.12 8.06 -2.91 -0.02 -2.15 16 43 H 0.19 -2.94 5.13 -2.91 -0.01 -2.95 16 44 H 0.10 0.02 7.83 -2.39 -0.02 0.01 16 45 H 0.40 -5.80 8.70 -74.06 -0.64 -6.45 16 46 H -0.28 0.46 7.11 99.48 0.71 1.16 16 47 H -0.30 -0.44 7.11 99.48 0.71 0.27 16 48 H 0.06 0.35 8.14 -2.39 -0.02 0.33 16 49 H 0.09 0.19 7.92 -2.39 -0.02 0.17 16 Total: 0.00 -22.25 414.66 1.28 -20.98 By element: Atomic # 1 Polarization: -11.01 SS G_CDS: -0.42 Total: -11.42 kcal Atomic # 6 Polarization: 7.21 SS G_CDS: 4.82 Total: 12.03 kcal Atomic # 7 Polarization: -1.54 SS G_CDS: -3.04 Total: -4.58 kcal Atomic # 8 Polarization: -9.90 SS G_CDS: -2.81 Total: -12.71 kcal Atomic # 9 Polarization: -1.32 SS G_CDS: 0.75 Total: -0.57 kcal Atomic # 14 Polarization: -5.57 SS G_CDS: 2.05 Total: -3.52 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -0.08 Total: -0.21 kcal Total: -22.25 1.28 -20.98 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_18323484_15734236.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.175 kcal (2) G-P(sol) polarization free energy of solvation -22.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.976 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.151 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds