Wall clock time and date at job start Tue Mar 9 2021 13:52:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53005 * 109.47094 * 2 1 4 4 C 1.53000 * 109.47519 * 240.00208 * 2 1 3 5 5 O 1.45199 * 109.47295 * 120.00105 * 2 1 3 6 6 C 1.34637 * 117.00088 * 60.00351 * 5 2 1 7 7 O 1.21511 * 119.99751 * 359.97438 * 6 5 2 8 8 N 1.34778 * 120.00338 * 180.02562 * 6 5 2 9 9 C 1.46494 * 120.00127 * 179.97438 * 8 6 5 10 10 H 1.09005 * 112.84975 * 23.80593 * 9 8 6 11 11 C 1.53780 * 113.61477 * 154.99727 * 9 8 6 12 12 C 1.53778 * 87.08250 * 140.06709 * 11 9 8 13 13 H 1.08995 * 113.61627 * 89.19872 * 12 11 9 14 14 C 1.53005 * 113.61414 * 220.02419 * 12 11 9 15 15 O 1.42901 * 109.47048 * 184.99923 * 14 12 11 16 16 C 1.35974 * 117.00017 * 179.97438 * 15 14 12 17 17 C 1.38662 * 119.98768 * 179.97438 * 16 15 14 18 18 C 1.50699 * 119.95621 * 0.02845 * 17 16 15 19 19 O 1.42903 * 109.47152 * 284.72371 * 18 17 16 20 20 Si 1.86293 * 109.47431 * 164.72263 * 18 17 16 21 21 C 1.38259 * 120.08622 * 179.74769 * 17 16 15 22 22 C 1.38486 * 120.09459 * 0.25513 * 21 17 16 23 23 O 1.36601 * 131.46515 * 179.97438 * 22 21 17 24 24 C 1.43991 * 105.47304 * 197.31575 * 23 22 21 25 25 O 1.43983 * 103.74115 * 332.85444 * 24 23 22 26 26 C 1.36500 * 105.50176 * 27.15797 * 25 24 23 27 27 C 1.38494 * 131.47783 * 162.74523 * 26 25 24 28 28 C 1.53780 * 113.69083 * 252.53324 * 9 8 6 29 29 H 1.08996 * 109.47028 * 299.99779 * 1 2 3 30 30 H 1.08999 * 109.47358 * 59.99823 * 1 2 3 31 31 H 1.09003 * 109.46708 * 179.97438 * 1 2 3 32 32 H 1.09005 * 109.47193 * 179.97438 * 3 2 1 33 33 H 1.08999 * 109.47163 * 300.00297 * 3 2 1 34 34 H 1.09003 * 109.46662 * 60.00191 * 3 2 1 35 35 H 1.09000 * 109.46997 * 300.00452 * 4 2 1 36 36 H 1.08999 * 109.46830 * 59.99646 * 4 2 1 37 37 H 1.08997 * 109.47559 * 179.97438 * 4 2 1 38 38 H 0.97007 * 119.99616 * 359.97438 * 8 6 5 39 39 H 1.09004 * 113.61245 * 25.51593 * 11 9 8 40 40 H 1.08996 * 113.62083 * 254.61736 * 11 9 8 41 41 H 1.08994 * 109.47632 * 64.99637 * 14 12 11 42 42 H 1.09005 * 109.47094 * 304.99370 * 14 12 11 43 43 H 1.09008 * 109.47393 * 44.71766 * 18 17 16 44 44 H 0.96700 * 114.00311 * 180.02562 * 19 18 17 45 45 H 1.48506 * 109.99973 * 59.99460 * 20 18 17 46 46 H 1.48493 * 110.00375 * 181.31561 * 20 18 17 47 47 H 1.08001 * 119.95160 * 180.23395 * 21 17 16 48 48 H 1.08998 * 110.57266 * 91.41948 * 24 23 22 49 49 H 1.08997 * 110.56699 * 214.14283 * 24 23 22 50 50 H 1.08000 * 120.00523 * 359.94119 * 27 26 25 51 51 H 1.09004 * 113.61285 * 105.45978 * 28 9 8 52 52 H 1.08995 * 113.61413 * 334.55842 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9510 -2.5094 0.5039 8 7 2.0673 -2.6655 2.4171 9 6 1.6733 -4.0666 2.5835 10 1 1.4211 -4.5503 1.6398 11 6 2.6462 -4.8811 3.4523 12 6 1.4086 -5.5554 4.0675 13 1 1.0848 -6.4468 3.5305 14 6 1.5190 -5.7785 5.5772 15 8 0.3801 -6.5101 6.0351 16 6 0.3225 -6.7947 7.3635 17 6 -0.7554 -7.5013 7.8748 18 6 -1.8620 -7.9538 6.9572 19 8 -2.6825 -6.8357 6.6130 20 14 -2.8964 -9.2411 7.8194 21 6 -0.8136 -7.7964 9.2243 22 6 0.2020 -7.3824 10.0699 23 8 0.3803 -7.5414 11.4149 24 6 1.3727 -6.5673 11.7886 25 8 2.1383 -6.3794 10.5838 26 6 1.2833 -6.6678 9.5596 27 6 1.3399 -6.3744 8.2072 28 6 0.6262 -4.2870 3.6880 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1300 1.4426 0.0005 33 1 1.6766 1.9564 -0.8899 34 1 1.6766 1.9563 0.8900 35 1 1.6767 -1.7488 -1.2493 36 1 1.6767 -0.2073 -2.1392 37 1 3.1300 -0.7208 -1.2495 38 1 2.6269 -2.2366 3.0833 39 1 3.2109 -4.2751 4.1609 40 1 3.2761 -5.5628 2.8809 41 1 1.5600 -4.8149 6.0849 42 1 2.4255 -6.3431 5.7957 43 1 -1.4312 -8.3808 6.0514 44 1 -3.4173 -7.0537 6.0233 45 1 -3.4893 -8.6714 9.0561 46 1 -3.9719 -9.7186 6.9138 47 1 -1.6523 -8.3501 9.6195 48 1 0.8982 -5.6336 12.0905 49 1 2.0036 -6.9516 12.5900 50 1 2.1773 -5.8204 7.8094 51 1 -0.3747 -4.4892 3.3066 52 1 0.6386 -3.5186 4.4609 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_1880786_15734236.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:52:04 Heat of formation + Delta-G solvation = -147.915047 kcal Electronic energy + Delta-G solvation = -35217.816138 eV Core-core repulsion = 30345.179483 eV Total energy + Delta-G solvation = -4872.636655 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.18715 -41.82240 -41.12793 -40.17360 -38.34867 -37.72898 -37.24612 -37.01969 -35.28798 -34.19250 -32.39610 -30.89008 -29.26024 -28.31623 -28.27414 -27.39731 -26.89760 -25.89757 -25.10887 -23.70446 -22.99177 -22.24424 -21.38843 -20.61222 -19.74257 -19.01273 -18.77748 -18.65381 -18.41697 -17.94068 -17.64609 -17.14713 -17.04857 -16.67512 -16.53203 -16.20265 -16.11203 -15.65511 -15.43120 -15.31896 -15.29355 -15.18420 -14.56047 -14.47330 -14.31582 -14.01323 -13.95168 -13.79438 -13.66350 -13.63333 -13.41533 -13.14318 -13.12622 -12.96697 -12.83179 -12.81199 -12.71405 -12.49390 -12.29019 -12.17931 -11.96478 -11.86291 -11.75034 -11.53396 -11.28016 -11.12794 -10.94042 -10.39543 -10.14067 -9.90910 -8.75600 -4.94425 -0.02582 0.17758 1.21033 1.28955 1.58613 1.65102 1.89000 1.95153 2.05766 2.38176 2.45213 3.13385 3.26507 3.34823 3.37631 3.41438 3.62816 3.63937 3.66500 3.79148 3.79281 3.84726 3.90175 3.97643 3.98615 4.06166 4.11340 4.15883 4.20359 4.33955 4.38079 4.48228 4.54403 4.57176 4.57745 4.64153 4.66704 4.75091 4.79283 4.82435 4.88564 4.91241 4.94542 4.95012 4.96734 5.06654 5.09778 5.12240 5.25468 5.35260 5.37955 5.49763 5.61945 5.96305 6.28669 6.43161 6.52748 7.44415 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.366 6.366 6 C 0.650 3.350 7 O -0.566 6.566 8 N -0.702 5.702 9 C 0.140 3.860 10 H 0.122 0.878 11 C -0.136 4.136 12 C -0.105 4.105 13 H 0.110 0.890 14 C 0.066 3.934 15 O -0.292 6.292 16 C 0.171 3.829 17 C -0.099 4.099 18 C -0.057 4.057 19 O -0.531 6.531 20 Si 0.681 3.319 21 C -0.058 4.058 22 C -0.002 4.002 23 O -0.305 6.305 24 C 0.213 3.787 25 O -0.306 6.306 26 C 0.083 3.917 27 C -0.194 4.194 28 C -0.146 4.146 29 H 0.060 0.940 30 H 0.072 0.928 31 H 0.087 0.913 32 H 0.067 0.933 33 H 0.082 0.918 34 H 0.067 0.933 35 H 0.087 0.913 36 H 0.072 0.928 37 H 0.060 0.940 38 H 0.406 0.594 39 H 0.092 0.908 40 H 0.086 0.914 41 H 0.067 0.933 42 H 0.069 0.931 43 H 0.081 0.919 44 H 0.379 0.621 45 H -0.254 1.254 46 H -0.258 1.258 47 H 0.147 0.853 48 H 0.086 0.914 49 H 0.135 0.865 50 H 0.144 0.856 51 H 0.080 0.920 52 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.921 -0.333 0.468 2.977 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.281 6.281 6 C 0.404 3.596 7 O -0.455 6.455 8 N -0.360 5.360 9 C 0.036 3.964 10 H 0.140 0.860 11 C -0.174 4.174 12 C -0.124 4.124 13 H 0.128 0.872 14 C -0.009 4.009 15 O -0.205 6.205 16 C 0.125 3.875 17 C -0.100 4.100 18 C -0.166 4.166 19 O -0.338 6.338 20 Si 0.582 3.418 21 C -0.076 4.076 22 C -0.046 4.046 23 O -0.222 6.222 24 C 0.102 3.898 25 O -0.222 6.222 26 C 0.037 3.963 27 C -0.213 4.213 28 C -0.185 4.185 29 H 0.079 0.921 30 H 0.091 0.909 31 H 0.106 0.894 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.086 0.914 35 H 0.106 0.894 36 H 0.091 0.909 37 H 0.079 0.921 38 H 0.241 0.759 39 H 0.111 0.889 40 H 0.105 0.895 41 H 0.085 0.915 42 H 0.087 0.913 43 H 0.099 0.901 44 H 0.226 0.774 45 H -0.179 1.179 46 H -0.183 1.183 47 H 0.164 0.836 48 H 0.104 0.896 49 H 0.153 0.847 50 H 0.161 0.839 51 H 0.099 0.901 52 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 2.202 -0.542 0.661 2.362 hybrid contribution -0.025 1.202 -0.068 1.204 sum 2.176 0.660 0.593 2.350 Atomic orbital electron populations 1.22521 0.93844 1.05070 1.02697 1.22114 0.94449 0.91552 0.81873 1.21881 1.02317 0.92384 1.03332 1.22521 1.01587 1.03456 0.96546 1.86306 1.71494 1.23510 1.46741 1.18170 0.78683 0.80628 0.82125 1.90915 1.40832 1.70405 1.43314 1.44750 1.55513 1.12154 1.23607 1.22522 0.95606 0.78923 0.99304 0.85976 1.23402 0.96481 0.98803 0.98740 1.22321 0.97682 0.98993 0.93367 0.87194 1.22911 0.87611 0.95805 0.94581 1.86189 1.44277 1.70589 1.19404 1.18148 0.92731 0.93596 0.83042 1.18157 0.95448 1.04163 0.92265 1.24482 0.94894 0.95565 1.01695 1.86612 1.44165 1.32884 1.70130 0.95086 0.82897 0.83568 0.80246 1.19736 0.96677 1.00794 0.90392 1.19436 0.97274 1.03778 0.84144 1.87409 1.59046 1.56174 1.19525 1.25686 0.84067 0.92123 0.87966 1.87383 1.34747 1.85664 1.14360 1.19444 0.88603 0.97726 0.90483 1.20006 1.02327 1.08938 0.90055 1.23608 0.99545 0.96842 0.98457 0.92136 0.90941 0.89405 0.91402 0.89928 0.91416 0.89423 0.90938 0.92127 0.75863 0.88948 0.89545 0.91519 0.91273 0.90140 0.77361 1.17863 1.18304 0.83585 0.89646 0.84736 0.83874 0.90119 0.89349 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.29 8.37 37.16 0.31 0.02 16 2 C 0.14 0.20 1.13 -90.62 -0.10 0.10 16 3 C -0.14 0.08 8.85 37.16 0.33 0.41 16 4 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 5 O -0.37 -0.93 9.94 -40.31 -0.40 -1.33 16 6 C 0.65 1.84 8.06 54.06 0.44 2.27 16 7 O -0.57 -2.91 11.48 -19.28 -0.22 -3.13 16 8 N -0.70 0.19 5.36 -57.93 -0.31 -0.12 16 9 C 0.14 -0.17 4.24 -67.12 -0.28 -0.45 16 10 H 0.12 0.02 7.46 -51.93 -0.39 -0.37 16 11 C -0.14 0.47 7.39 -25.92 -0.19 0.28 16 12 C -0.10 0.25 4.01 -89.80 -0.36 -0.11 16 13 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 14 C 0.07 -0.11 4.58 37.16 0.17 0.06 16 15 O -0.29 -0.31 9.45 -19.66 -0.19 -0.50 16 16 C 0.17 0.32 6.66 -39.26 -0.26 0.06 16 17 C -0.10 -0.20 5.31 -104.46 -0.55 -0.75 16 18 C -0.06 -0.03 2.36 36.01 0.09 0.05 16 19 O -0.53 -0.93 12.86 -35.23 -0.45 -1.38 16 20 Si 0.68 -0.37 30.19 -169.99 -5.13 -5.50 16 21 C -0.06 -0.12 8.67 -39.48 -0.34 -0.46 16 22 C 0.00 -0.01 7.15 -39.10 -0.28 -0.29 16 23 O -0.31 -0.80 11.41 -46.02 -0.53 -1.33 16 24 C 0.21 -0.04 8.89 101.05 0.90 0.86 16 25 O -0.31 -0.71 11.40 -45.69 -0.52 -1.23 16 26 C 0.08 0.22 7.15 -39.09 -0.28 -0.05 16 27 C -0.19 -0.29 9.05 -39.32 -0.36 -0.64 16 28 C -0.15 0.18 7.43 -25.92 -0.19 -0.01 16 29 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 30 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 31 H 0.09 0.32 5.88 -51.93 -0.31 0.02 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 34 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.09 0.30 5.88 -51.93 -0.31 0.00 16 36 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 37 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 38 H 0.41 -0.95 8.84 -40.82 -0.36 -1.31 16 39 H 0.09 -0.42 8.08 -51.93 -0.42 -0.83 16 40 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 41 H 0.07 -0.15 7.35 -51.93 -0.38 -0.53 16 42 H 0.07 -0.20 7.67 -51.93 -0.40 -0.59 16 43 H 0.08 -0.05 7.81 -51.92 -0.41 -0.45 16 44 H 0.38 -0.81 8.74 45.56 0.40 -0.42 16 45 H -0.25 -0.56 6.74 56.52 0.38 -0.18 16 46 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 47 H 0.15 0.12 4.89 -52.49 -0.26 -0.14 16 48 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 49 H 0.14 -0.42 8.14 -51.93 -0.42 -0.85 16 50 H 0.14 -0.08 6.29 -52.49 -0.33 -0.41 16 51 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 52 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 LS Contribution 418.09 15.07 6.30 6.30 Total: 0.00 -8.84 418.09 -9.97 -18.81 By element: Atomic # 1 Polarization: -4.12 SS G_CDS: -7.85 Total: -11.97 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: -0.66 Total: 1.39 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: -0.31 Total: -0.12 kcal Atomic # 8 Polarization: -6.59 SS G_CDS: -2.31 Total: -8.90 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: -5.13 Total: -5.50 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -8.84 -9.97 -18.81 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_1880786_15734236.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.106 kcal (2) G-P(sol) polarization free energy of solvation -8.842 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.949 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.966 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.809 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.915 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds