Wall clock time and date at job start Tue Mar 9 2021 14:12:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35901 * 116.99721 * 2 1 4 4 C 1.38610 * 120.02588 * 180.02562 * 3 2 1 5 5 C 1.50704 * 120.05480 * 359.97218 * 4 3 2 6 6 O 1.42902 * 109.47049 * 55.17226 * 5 4 3 7 7 Si 1.86295 * 109.47237 * 295.16945 * 5 4 3 8 8 C 1.38656 * 119.89044 * 179.70204 * 4 3 2 9 9 O 1.35899 * 120.02800 * 180.29623 * 8 4 3 10 10 C 1.42901 * 117.00109 * 180.02562 * 9 8 4 11 11 C 1.52997 * 109.47240 * 180.02562 * 10 9 8 12 12 H 1.08998 * 112.85056 * 45.32858 * 11 10 9 13 13 C 1.53781 * 113.61218 * 176.53006 * 11 10 9 14 14 C 1.53783 * 87.08159 * 139.98146 * 13 11 10 15 15 H 1.08997 * 113.61497 * 89.11215 * 14 13 11 16 16 O 1.42895 * 113.61096 * 219.93572 * 14 13 11 17 17 C 1.53781 * 113.61253 * 274.13377 * 11 10 9 18 18 C 1.38750 * 119.94444 * 0.27193 * 8 4 3 19 19 C 1.38201 * 120.05443 * 359.97438 * 18 8 4 20 20 C 1.38151 * 120.10693 * 0.02562 * 19 18 8 21 21 H 1.08999 * 109.47530 * 60.00278 * 1 2 3 22 22 H 1.09006 * 109.46612 * 180.02562 * 1 2 3 23 23 H 1.09003 * 109.47160 * 299.99798 * 1 2 3 24 24 H 1.09000 * 109.47124 * 175.16831 * 5 4 3 25 25 H 0.96699 * 114.00185 * 65.47319 * 6 5 4 26 26 H 1.48504 * 109.99977 * 305.64163 * 7 5 4 27 27 H 1.48499 * 110.00076 * 66.96019 * 7 5 4 28 28 H 1.09000 * 109.46733 * 300.00383 * 10 9 8 29 29 H 1.09001 * 109.47027 * 59.99103 * 10 9 8 30 30 H 1.08999 * 113.61238 * 254.52693 * 13 11 10 31 31 H 1.08992 * 113.61529 * 25.42885 * 13 11 10 32 32 H 0.96710 * 113.99713 * 179.97438 * 16 14 13 33 33 H 1.08996 * 113.61259 * 334.56786 * 17 11 10 34 34 H 1.09000 * 113.61141 * 105.46869 * 17 11 10 35 35 H 1.08007 * 119.97479 * 179.97438 * 18 8 4 36 36 H 1.08000 * 119.94366 * 179.97438 * 19 18 8 37 37 H 1.08008 * 119.96921 * 180.02562 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2842 -0.0005 5 6 4.2527 0.0214 -0.0005 6 8 3.8676 -0.7980 -1.1061 7 14 3.9664 -0.9062 1.5895 8 6 4.0566 2.5211 -0.0068 9 8 5.4135 2.5961 -0.0134 10 6 5.9910 3.9032 -0.0190 11 6 7.5165 3.7868 -0.0267 12 1 7.8811 3.0491 -0.7414 13 6 8.2372 5.1422 -0.1185 14 6 9.2491 4.5840 0.8961 15 1 10.0884 4.0637 0.4346 16 8 9.6594 5.5369 1.8787 17 6 8.1302 3.6415 1.3758 18 6 3.2970 3.6822 -0.0068 19 6 1.9171 3.6065 -0.0011 20 6 1.2906 2.3753 0.0051 21 1 -0.3634 0.5138 -0.8900 22 1 -0.3633 -1.0278 0.0005 23 1 -0.3633 0.5138 0.8900 24 1 5.3090 0.2760 -0.0875 25 1 4.0669 -0.4120 -1.9700 26 1 4.2336 -0.0192 2.7502 27 1 2.5685 -1.4045 1.6422 28 1 5.6635 4.4412 -0.9087 29 1 5.6719 4.4453 0.8712 30 1 8.6678 5.3422 -1.0996 31 1 7.6493 5.9761 0.2648 32 1 10.2956 5.1915 2.5200 33 1 7.5130 4.0645 2.1684 34 1 8.4744 2.6318 1.5993 35 1 3.7845 4.6460 -0.0112 36 1 1.3275 4.5114 -0.0007 37 1 0.2120 2.3187 0.0092 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_215219_11354858.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:12:02 Heat of formation + Delta-G solvation = -99.911922 kcal Electronic energy + Delta-G solvation = -20760.824309 eV Core-core repulsion = 17471.662278 eV Total energy + Delta-G solvation = -3289.162031 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.124 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.76803 -40.68180 -39.69529 -37.66536 -37.15061 -36.04330 -32.63338 -30.63735 -29.36764 -28.26717 -26.85799 -26.45999 -24.12801 -22.70042 -22.32345 -20.68338 -19.60730 -18.67638 -18.34083 -17.60096 -17.25228 -17.16087 -16.72883 -16.51847 -16.29165 -15.97547 -15.38188 -15.17983 -14.95815 -14.55658 -14.02825 -13.76363 -13.56687 -13.51412 -13.26186 -12.99321 -12.70292 -12.61835 -12.37877 -12.23871 -12.01245 -11.79976 -11.65001 -11.34229 -11.08344 -10.86883 -10.84009 -9.36651 -9.14660 -4.66035 0.23466 0.39254 1.65873 1.75498 1.91497 2.35786 2.56184 2.66792 3.15769 3.34566 3.44064 3.61768 3.69068 3.80351 3.86224 3.93136 3.97384 4.09801 4.13881 4.17347 4.20695 4.23767 4.30279 4.35909 4.53094 4.57299 4.59983 4.65886 4.66771 4.84657 4.88125 5.00918 5.14032 5.23724 5.24681 5.39889 5.45726 6.26954 6.38425 6.62470 6.80271 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.292 6.292 3 C 0.179 3.821 4 C -0.193 4.193 5 C -0.056 4.056 6 O -0.530 6.530 7 Si 0.741 3.259 8 C 0.179 3.821 9 O -0.306 6.306 10 C 0.071 3.929 11 C -0.110 4.110 12 H 0.107 0.893 13 C -0.120 4.120 14 C 0.076 3.924 15 H 0.085 0.915 16 O -0.560 6.560 17 C -0.164 4.164 18 C -0.248 4.248 19 C -0.034 4.034 20 C -0.248 4.248 21 H 0.058 0.942 22 H 0.103 0.897 23 H 0.055 0.945 24 H 0.076 0.924 25 H 0.360 0.640 26 H -0.262 1.262 27 H -0.242 1.242 28 H 0.068 0.932 29 H 0.067 0.933 30 H 0.081 0.919 31 H 0.093 0.907 32 H 0.381 0.619 33 H 0.090 0.910 34 H 0.076 0.924 35 H 0.132 0.868 36 H 0.131 0.869 37 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.249 0.633 -0.457 1.474 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.204 6.204 3 C 0.133 3.867 4 C -0.195 4.195 5 C -0.165 4.165 6 O -0.334 6.334 7 Si 0.639 3.361 8 C 0.133 3.867 9 O -0.219 6.219 10 C -0.004 4.004 11 C -0.128 4.128 12 H 0.125 0.875 13 C -0.157 4.157 14 C 0.017 3.983 15 H 0.103 0.897 16 O -0.366 6.366 17 C -0.202 4.202 18 C -0.267 4.267 19 C -0.052 4.052 20 C -0.267 4.267 21 H 0.077 0.923 22 H 0.122 0.878 23 H 0.074 0.926 24 H 0.095 0.905 25 H 0.206 0.794 26 H -0.187 1.187 27 H -0.166 1.166 28 H 0.086 0.914 29 H 0.085 0.915 30 H 0.100 0.900 31 H 0.112 0.888 32 H 0.229 0.771 33 H 0.109 0.891 34 H 0.094 0.906 35 H 0.149 0.851 36 H 0.149 0.851 37 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 0.407 0.227 0.419 0.627 hybrid contribution -0.316 1.600 -0.766 1.802 sum 0.091 1.827 -0.348 1.862 Atomic orbital electron populations 1.23152 0.78223 1.04399 1.01407 1.86273 1.21263 1.25548 1.87357 1.18490 0.90871 0.84876 0.92488 1.18838 0.91345 0.94142 1.15160 1.24858 0.98451 0.92344 1.00839 1.86762 1.85888 1.45283 1.15500 0.94156 0.84884 0.85182 0.71891 1.18355 0.82484 0.92563 0.93293 1.86025 1.16777 1.31254 1.87889 1.22882 0.92929 0.82686 1.01907 1.22335 0.92006 0.99189 0.99261 0.87518 1.23060 0.96729 0.96576 0.99358 1.23318 0.94795 0.90095 0.90058 0.89682 1.86522 1.65800 1.40143 1.44125 1.23810 0.98679 1.00897 0.96798 1.21171 0.94932 0.97447 1.13146 1.20775 0.93746 0.97292 0.93387 1.21202 1.00412 0.92069 1.13035 0.92310 0.87843 0.92639 0.90545 0.79375 1.18738 1.16561 0.91400 0.91451 0.90050 0.88827 0.77139 0.89111 0.90572 0.85051 0.85137 0.84970 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.29 -1.19 7.37 -31.45 -0.23 -1.42 16 3 C 0.18 0.70 6.11 -39.24 -0.24 0.46 16 4 C -0.19 -0.76 4.49 -104.33 -0.47 -1.23 16 5 C -0.06 -0.17 2.63 36.01 0.09 -0.08 16 6 O -0.53 -1.70 11.84 -47.25 -0.56 -2.26 16 7 Si 0.74 2.03 31.66 -169.99 -5.38 -3.35 16 8 C 0.18 0.55 6.66 -39.24 -0.26 0.29 16 9 O -0.31 -0.65 8.91 -19.42 -0.17 -0.82 16 10 C 0.07 -0.02 4.56 37.16 0.17 0.15 16 11 C -0.11 0.13 4.00 -89.81 -0.36 -0.23 16 12 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 13 C -0.12 0.14 7.47 -25.92 -0.19 -0.05 16 14 C 0.08 -0.07 5.21 -25.83 -0.13 -0.21 16 15 H 0.09 -0.19 8.14 -51.93 -0.42 -0.62 16 16 O -0.56 -0.23 13.68 -35.23 -0.48 -0.71 16 17 C -0.16 0.15 7.48 -25.83 -0.19 -0.05 16 18 C -0.25 -0.45 9.04 -39.41 -0.36 -0.80 16 19 C -0.03 -0.05 10.04 -39.63 -0.40 -0.45 16 20 C -0.25 -0.55 9.04 -39.41 -0.36 -0.90 16 21 H 0.06 -0.05 7.67 -51.93 -0.40 -0.45 16 22 H 0.10 -0.10 8.14 -51.93 -0.42 -0.53 16 23 H 0.05 -0.03 7.65 -51.93 -0.40 -0.43 16 24 H 0.08 0.16 6.83 -51.93 -0.35 -0.19 16 25 H 0.36 0.17 9.11 45.56 0.42 0.59 16 26 H -0.26 -1.25 7.11 56.52 0.40 -0.85 16 27 H -0.24 -1.29 6.52 56.52 0.37 -0.93 16 28 H 0.07 -0.08 7.66 -51.93 -0.40 -0.48 16 29 H 0.07 -0.04 7.40 -51.93 -0.38 -0.42 16 30 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 32 H 0.38 -1.34 9.12 45.56 0.42 -0.93 16 33 H 0.09 0.00 7.92 -51.93 -0.41 -0.41 16 34 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 35 H 0.13 -0.03 6.29 -52.48 -0.33 -0.36 16 36 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 37 H 0.13 0.02 6.29 -52.48 -0.33 -0.31 16 LS Contribution 306.43 15.07 4.62 4.62 Total: 0.00 -6.80 306.43 -8.27 -15.08 By element: Atomic # 1 Polarization: -4.67 SS G_CDS: -4.36 Total: -9.03 kcal Atomic # 6 Polarization: -0.40 SS G_CDS: -1.71 Total: -2.10 kcal Atomic # 8 Polarization: -3.77 SS G_CDS: -1.45 Total: -5.21 kcal Atomic # 14 Polarization: 2.03 SS G_CDS: -5.38 Total: -3.35 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -6.80 -8.27 -15.08 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_215219_11354858.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.836 kcal (2) G-P(sol) polarization free energy of solvation -6.801 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.637 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.275 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.076 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.912 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds