Wall clock time and date at job start Tue Mar 9 2021 14:58:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.36001 * 117.00304 * 2 1 4 4 C 1.39156 * 120.06587 * 179.72611 * 3 2 1 5 5 O 1.35988 * 120.06365 * 0.02562 * 4 3 2 6 6 C 1.42902 * 116.99852 * 180.02562 * 5 4 3 7 7 C 1.52999 * 109.47360 * 180.02562 * 6 5 4 8 8 H 1.09010 * 112.84535 * 316.18974 * 7 6 5 9 9 C 1.53777 * 113.61726 * 87.49724 * 7 6 5 10 10 C 1.53780 * 87.08102 * 139.98660 * 9 7 6 11 11 H 1.08995 * 113.62136 * 89.11037 * 10 9 7 12 12 O 1.42903 * 113.69103 * 220.01334 * 10 9 7 13 13 C 1.53777 * 113.61621 * 185.00053 * 7 6 5 14 14 C 1.38556 * 119.86306 * 179.79202 * 4 3 2 15 15 C 1.38316 * 119.99278 * 0.44211 * 14 4 3 16 16 Br 1.89106 * 119.93811 * 179.79041 * 15 14 4 17 17 C 1.38338 * 120.12956 * 359.80754 * 15 14 4 18 18 C 1.50693 * 119.93466 * 180.02562 * 17 15 14 19 19 O 1.42900 * 109.47060 * 194.98070 * 18 17 15 20 20 Si 1.86292 * 109.47258 * 314.97886 * 18 17 15 21 21 C 1.38242 * 120.13013 * 359.97438 * 17 15 14 22 22 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 23 23 H 1.09001 * 109.46938 * 59.99841 * 1 2 3 24 24 H 1.09004 * 109.46926 * 299.99962 * 1 2 3 25 25 H 1.09005 * 109.46661 * 299.99605 * 6 5 4 26 26 H 1.08994 * 109.47369 * 59.99525 * 6 5 4 27 27 H 1.08999 * 113.61294 * 254.52766 * 9 7 6 28 28 H 1.08998 * 113.61596 * 25.43230 * 9 7 6 29 29 H 0.96706 * 113.99387 * 277.53448 * 12 10 9 30 30 H 1.09002 * 113.61345 * 334.56333 * 13 7 6 31 31 H 1.09000 * 113.61877 * 105.46520 * 13 7 6 32 32 H 1.08001 * 120.00429 * 180.20359 * 14 4 3 33 33 H 1.08994 * 109.47188 * 74.98393 * 18 17 15 34 34 H 0.96702 * 114.00245 * 59.99477 * 19 18 17 35 35 H 1.48497 * 110.00211 * 180.02562 * 20 18 17 36 36 H 1.48506 * 110.00402 * 301.32122 * 20 18 17 37 37 H 1.08000 * 119.99403 * 179.97438 * 21 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4361 1.2861 0.0058 5 8 4.1792 0.1473 0.0109 6 6 5.6001 0.2998 0.0172 7 6 6.2612 -1.0800 0.0216 8 1 5.7871 -1.7742 0.7156 9 6 6.4783 -1.6636 -1.3844 10 6 7.8392 -2.1702 -0.8783 11 1 7.7968 -3.1634 -0.4314 12 8 8.8933 -2.0362 -1.8339 13 6 7.7926 -1.0289 0.1514 14 6 4.0608 2.5228 0.0014 15 6 3.3033 3.6801 0.0005 16 35 4.1576 5.3672 0.0005 17 6 1.9220 3.6059 0.0001 18 6 1.1010 4.8695 -0.0014 19 8 -0.2500 4.5602 0.3466 20 14 1.8032 6.0678 1.2401 21 6 1.2932 2.3747 -0.0001 22 1 -0.3634 -1.0277 -0.0005 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 0.5139 0.8900 25 1 5.9105 0.8481 -0.8723 26 1 5.9024 0.8509 0.9077 27 1 5.7818 -2.4628 -1.6377 28 1 6.5568 -0.9061 -2.1643 29 1 8.9277 -2.7510 -2.4843 30 1 8.2305 -0.0978 -0.2086 31 1 8.1571 -1.3156 1.1378 32 1 5.1391 2.5832 0.0025 33 1 1.1267 5.3183 -0.9944 34 1 -0.3488 4.1568 1.2198 35 1 1.0020 7.3180 1.2488 36 1 1.8031 5.4557 2.5932 37 1 0.2146 2.3193 -0.0001 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_2162974_11354858.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:58:50 Heat of formation + Delta-G solvation = -104.241835 kcal Electronic energy + Delta-G solvation = -22407.264791 eV Core-core repulsion = 18778.096998 eV Total energy + Delta-G solvation = -3629.167793 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.034 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.93421 -40.62882 -39.36569 -39.11400 -37.23153 -36.05819 -33.48535 -32.04177 -30.63853 -29.40865 -28.57639 -26.84250 -26.24438 -24.26532 -22.90050 -22.47551 -20.71979 -19.69529 -18.79345 -18.45928 -18.18197 -17.52789 -17.30768 -16.65903 -16.29534 -16.20437 -16.04101 -15.86434 -15.73705 -15.09565 -14.77622 -14.25615 -14.05508 -14.00751 -13.67814 -13.54112 -13.07912 -12.93923 -12.76461 -12.56791 -12.47347 -12.38403 -12.25206 -12.19326 -11.97478 -11.81770 -11.46279 -11.31356 -10.82724 -10.62161 -9.86582 -8.92999 -4.49596 -0.14820 -0.01503 0.19212 1.29505 1.69157 1.94542 2.08380 2.11703 2.35020 3.14708 3.17127 3.35641 3.41166 3.46832 3.54293 3.70539 3.79781 3.86179 3.92463 4.09229 4.13137 4.13451 4.15126 4.28635 4.34704 4.38485 4.50228 4.57314 4.62834 4.68101 4.69347 4.69921 4.89175 5.00069 5.02785 5.24163 5.28796 5.89395 6.34246 6.37710 6.63850 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.299 6.299 3 C 0.128 3.872 4 C 0.108 3.892 5 O -0.295 6.295 6 C 0.066 3.934 7 C -0.108 4.108 8 H 0.107 0.893 9 C -0.163 4.163 10 C 0.076 3.924 11 H 0.085 0.915 12 O -0.560 6.560 13 C -0.120 4.120 14 C -0.136 4.136 15 C -0.098 4.098 16 Br 0.068 6.932 17 C -0.072 4.072 18 C -0.059 4.059 19 O -0.534 6.534 20 Si 0.538 3.462 21 C -0.163 4.163 22 H 0.106 0.894 23 H 0.060 0.940 24 H 0.058 0.942 25 H 0.068 0.932 26 H 0.068 0.932 27 H 0.074 0.926 28 H 0.091 0.909 29 H 0.381 0.619 30 H 0.094 0.906 31 H 0.081 0.919 32 H 0.150 0.850 33 H 0.127 0.873 34 H 0.375 0.625 35 H -0.230 1.230 36 H -0.246 1.246 37 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.842 -2.630 -0.465 3.244 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.212 6.212 3 C 0.082 3.918 4 C 0.061 3.939 5 O -0.208 6.208 6 C -0.009 4.009 7 C -0.127 4.127 8 H 0.125 0.875 9 C -0.201 4.201 10 C 0.017 3.983 11 H 0.102 0.898 12 O -0.366 6.366 13 C -0.157 4.157 14 C -0.157 4.157 15 C -0.178 4.178 16 Br 0.153 6.847 17 C -0.075 4.075 18 C -0.169 4.169 19 O -0.339 6.339 20 Si 0.435 3.565 21 C -0.182 4.182 22 H 0.124 0.876 23 H 0.078 0.922 24 H 0.077 0.923 25 H 0.086 0.914 26 H 0.086 0.914 27 H 0.093 0.907 28 H 0.110 0.890 29 H 0.228 0.772 30 H 0.113 0.887 31 H 0.099 0.901 32 H 0.168 0.832 33 H 0.145 0.855 34 H 0.222 0.778 35 H -0.153 1.153 36 H -0.169 1.169 37 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 2.033 -1.149 0.030 2.336 hybrid contribution -1.407 -1.326 0.125 1.938 sum 0.626 -2.475 0.156 2.557 Atomic orbital electron populations 1.23198 0.77710 1.04677 1.01687 1.86225 1.21691 1.25188 1.88056 1.18371 0.89172 0.85527 0.98767 1.18035 0.88247 0.85871 1.01738 1.86215 1.18748 1.27352 1.88529 1.22921 0.77889 0.98248 1.01805 1.22308 0.95214 0.95965 0.99171 0.87531 1.23774 0.97816 1.01732 0.96769 1.23289 0.86305 0.98271 0.90466 0.89752 1.86523 1.52935 1.52099 1.45016 1.23074 0.93729 0.99677 0.99258 1.20906 1.00704 0.89423 1.04632 1.20974 0.93564 0.90651 1.12587 1.96280 1.72639 1.21179 1.94589 1.19895 0.92015 0.96300 0.99293 1.24964 0.84754 0.98248 1.08946 1.86540 1.24450 1.83593 1.39323 0.93629 1.00023 0.82097 0.80749 1.20854 1.01035 0.89691 1.06641 0.87611 0.92172 0.92336 0.91413 0.91370 0.90722 0.89040 0.77177 0.88732 0.90070 0.83197 0.85531 0.77779 1.15332 1.16879 0.82931 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.30 -0.66 10.28 -34.26 -0.35 -1.01 16 3 C 0.13 0.26 6.70 -39.12 -0.26 0.00 16 4 C 0.11 0.20 6.70 -39.12 -0.26 -0.07 16 5 O -0.29 -0.57 9.92 -34.22 -0.34 -0.91 16 6 C 0.07 -0.06 4.58 37.16 0.17 0.11 16 7 C -0.11 0.14 4.01 -89.81 -0.36 -0.22 16 8 H 0.11 -0.13 8.14 -51.92 -0.42 -0.55 16 9 C -0.16 0.17 7.47 -25.92 -0.19 -0.03 16 10 C 0.08 -0.08 5.21 -25.92 -0.14 -0.22 16 11 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 12 O -0.56 -0.12 13.67 -35.23 -0.48 -0.60 16 13 C -0.12 0.17 7.47 -25.92 -0.19 -0.02 16 14 C -0.14 -0.03 8.77 -39.44 -0.35 -0.38 16 15 C -0.10 -0.05 5.81 -39.52 -0.23 -0.28 16 16 Br 0.07 -0.06 27.32 -68.01 -1.86 -1.92 16 17 C -0.07 -0.08 5.13 -104.59 -0.54 -0.61 16 18 C -0.06 -0.07 2.84 36.00 0.10 0.03 16 19 O -0.53 -0.85 11.64 -35.23 -0.41 -1.26 16 20 Si 0.54 1.05 26.82 -169.99 -4.56 -3.51 16 21 C -0.16 -0.15 8.23 -39.46 -0.32 -0.48 16 22 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 23 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 24 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 25 H 0.07 -0.11 7.35 -51.93 -0.38 -0.50 16 26 H 0.07 -0.14 7.67 -51.93 -0.40 -0.54 16 27 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.09 -0.04 7.89 -51.93 -0.41 -0.45 16 29 H 0.38 -1.40 9.12 45.56 0.42 -0.98 16 30 H 0.09 -0.11 8.10 -51.93 -0.42 -0.53 16 31 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 32 H 0.15 -0.28 6.30 -52.49 -0.33 -0.61 16 33 H 0.13 0.06 7.96 -51.93 -0.41 -0.35 16 34 H 0.37 -0.46 8.43 45.56 0.38 -0.08 16 35 H -0.23 -1.08 7.11 56.52 0.40 -0.68 16 36 H -0.25 -1.04 7.11 56.52 0.40 -0.64 16 37 H 0.15 -0.08 5.32 -52.49 -0.28 -0.36 16 LS Contribution 320.78 15.07 4.83 4.83 Total: 0.00 -6.67 320.78 -8.69 -15.36 By element: Atomic # 1 Polarization: -5.85 SS G_CDS: -3.94 Total: -9.80 kcal Atomic # 6 Polarization: 0.38 SS G_CDS: -1.58 Total: -1.19 kcal Atomic # 8 Polarization: -2.19 SS G_CDS: -1.58 Total: -3.77 kcal Atomic # 14 Polarization: 1.05 SS G_CDS: -4.56 Total: -3.51 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -1.86 Total: -1.92 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -6.67 -8.69 -15.36 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_2162974_11354858.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.884 kcal (2) G-P(sol) polarization free energy of solvation -6.672 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.556 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.686 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.358 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.242 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds