Wall clock time and date at job start Tue Mar 9 2021 15:27:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52995 * 109.47472 * 2 1 4 4 C 1.53004 * 109.46533 * 240.00119 * 2 1 3 5 5 Si 1.86296 * 109.47201 * 120.00551 * 2 1 3 6 6 C 1.86299 * 109.47025 * 299.99605 * 5 2 1 7 7 C 1.86291 * 109.47270 * 179.97438 * 5 2 1 8 8 O 1.63105 * 109.47228 * 59.99350 * 5 2 1 9 9 C 1.42903 * 113.99975 * 180.02562 * 8 5 2 10 10 C 1.52996 * 109.47119 * 180.02562 * 9 8 5 11 11 O 1.42904 * 109.47191 * 65.00005 * 10 9 8 12 12 C 1.35924 * 117.00161 * 179.97438 * 11 10 9 13 13 C 1.38666 * 120.05984 * 0.02562 * 12 11 10 14 14 C 1.38191 * 119.96042 * 180.02562 * 13 12 11 15 15 C 1.38236 * 120.07105 * 0.02562 * 14 13 12 16 16 C 1.50706 * 119.93469 * 179.97438 * 15 14 13 17 17 O 1.42895 * 109.46938 * 299.99527 * 16 15 14 18 18 Si 1.86299 * 109.46748 * 179.97438 * 16 15 14 19 19 H 1.48503 * 109.47188 * 60.00070 * 18 16 15 20 20 H 1.48506 * 109.47139 * 179.97438 * 18 16 15 21 21 H 1.48505 * 109.47505 * 299.99883 * 18 16 15 22 22 C 1.38288 * 120.12567 * 0.22877 * 15 14 13 23 23 C 1.38217 * 120.03547 * 359.49507 * 22 15 14 24 24 Cl 1.73601 * 120.03754 * 180.23016 * 23 22 15 25 25 H 1.09007 * 109.47042 * 299.99910 * 1 2 3 26 26 H 1.09006 * 109.47189 * 59.99341 * 1 2 3 27 27 H 1.08998 * 109.47958 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47171 * 179.97438 * 3 2 1 29 29 H 1.09006 * 109.47451 * 300.00498 * 3 2 1 30 30 H 1.09007 * 109.46913 * 60.00011 * 3 2 1 31 31 H 1.08997 * 109.47496 * 299.99997 * 4 2 1 32 32 H 1.08997 * 109.47076 * 60.00624 * 4 2 1 33 33 H 1.09000 * 109.47025 * 180.02562 * 4 2 1 34 34 H 1.08995 * 109.47392 * 180.02562 * 6 5 2 35 35 H 1.08997 * 109.47219 * 300.00157 * 6 5 2 36 36 H 1.09000 * 109.47301 * 60.00072 * 6 5 2 37 37 H 1.09007 * 109.47263 * 299.99716 * 7 5 2 38 38 H 1.08998 * 109.47668 * 59.99731 * 7 5 2 39 39 H 1.09004 * 109.47452 * 179.97438 * 7 5 2 40 40 H 1.08997 * 109.47146 * 60.00164 * 9 8 5 41 41 H 1.08998 * 109.46762 * 300.00353 * 9 8 5 42 42 H 1.09000 * 109.46982 * 305.00032 * 10 9 8 43 43 H 1.08993 * 109.47433 * 184.99848 * 10 9 8 44 44 H 1.08007 * 120.01714 * 359.97438 * 13 12 11 45 45 H 1.08000 * 119.96298 * 179.97438 * 14 13 12 46 46 H 1.09000 * 109.47161 * 59.99793 * 16 15 14 47 47 H 0.96698 * 114.00355 * 299.99977 * 17 16 15 48 48 H 1.07998 * 119.98221 * 179.72428 * 22 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0399 -0.7213 -1.2493 5 14 2.1510 -0.8784 1.5210 6 6 1.5301 -0.0002 3.0422 7 6 4.0139 -0.8790 1.5206 8 8 1.6072 -2.4161 1.5210 9 6 2.0284 -3.1816 2.6518 10 6 1.4635 -4.5995 2.5468 11 8 2.0328 -5.2563 1.4124 12 6 1.6342 -6.5338 1.1746 13 6 0.7142 -7.1422 2.0151 14 6 0.3107 -8.4413 1.7717 15 6 0.8237 -9.1351 0.6917 16 6 0.3820 -10.5520 0.4295 17 8 0.7118 -11.3695 1.5541 18 14 1.2481 -11.2018 -1.0866 19 1 2.7167 -11.1735 -0.8681 20 1 0.8134 -12.5981 -1.3447 21 1 0.9050 -10.3520 -2.2552 22 6 1.7453 -8.5334 -0.1455 23 6 2.1479 -7.2323 0.0901 24 17 3.3004 -6.4748 -0.9643 25 1 -0.3633 0.5139 0.8901 26 1 -0.3634 0.5140 -0.8900 27 1 -0.3635 -1.0276 -0.0005 28 1 3.1300 1.4424 0.0005 29 1 1.6767 1.9564 -0.8900 30 1 1.6767 1.9563 0.8901 31 1 1.6765 -1.7489 -1.2494 32 1 1.6766 -0.2073 -2.1392 33 1 3.1299 -0.7217 -1.2492 34 1 1.8938 -0.5138 3.9321 35 1 1.8934 1.0274 3.0423 36 1 0.4401 -0.0001 3.0423 37 1 4.3769 -1.3931 0.6306 38 1 4.3777 0.1484 1.5205 39 1 4.3773 -1.3926 2.4108 40 1 1.6637 -2.7115 3.5650 41 1 3.1173 -3.2254 2.6756 42 1 0.3805 -4.5517 2.4333 43 1 1.7099 -5.1567 3.4506 44 1 0.3138 -6.6013 2.8598 45 1 -0.4055 -8.9154 2.4264 46 1 -0.6958 -10.5727 0.2687 47 1 1.6570 -11.3980 1.7560 48 1 2.1480 -9.0791 -0.9860 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_2162996_10264010.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:27:02 Heat of formation + Delta-G solvation = -154.697342 kcal Electronic energy + Delta-G solvation = -26445.744102 eV Core-core repulsion = 22650.032977 eV Total energy + Delta-G solvation = -3795.711125 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 346.133 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.39800 -39.46262 -38.00113 -37.46247 -36.91147 -36.83540 -32.20906 -32.07494 -30.52551 -29.40705 -29.11039 -27.86878 -27.39153 -26.47685 -24.93142 -23.24489 -22.30895 -20.42812 -19.59603 -18.41635 -18.15717 -17.57395 -16.72691 -16.67280 -16.17207 -16.13125 -15.97331 -15.67144 -15.46836 -15.39290 -14.87279 -14.73575 -14.64872 -14.31542 -14.12385 -13.92261 -13.59847 -13.53004 -13.44919 -13.27495 -12.99198 -12.93803 -12.91512 -12.54619 -12.46999 -12.40058 -12.31443 -12.16267 -12.10466 -11.87000 -11.74066 -11.70728 -11.66601 -11.56439 -11.35118 -10.47482 -10.40992 -10.08610 -9.98614 -9.18203 0.05419 0.14097 1.11737 1.23169 1.39418 1.41653 1.48901 1.70698 1.89738 2.00021 2.03692 2.39148 2.45834 3.40786 3.52249 3.63132 3.78776 3.89792 3.95340 4.04980 4.09307 4.11571 4.12345 4.17923 4.36585 4.46645 4.47950 4.50616 4.62055 4.64539 4.66327 4.70149 4.73003 4.80189 4.84933 4.85991 4.99783 5.07758 5.10319 5.11217 5.15943 5.29833 5.31961 5.33742 5.41228 5.48222 5.50591 5.51022 5.58686 6.22406 6.49899 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.374 4.374 3 C -0.137 4.137 4 C -0.134 4.134 5 Si 1.287 2.713 6 C -0.512 4.512 7 C -0.511 4.511 8 O -0.618 6.618 9 C 0.087 3.913 10 C 0.055 3.945 11 O -0.290 6.290 12 C 0.149 3.851 13 C -0.200 4.200 14 C -0.043 4.043 15 C -0.150 4.150 16 C -0.072 4.072 17 O -0.538 6.538 18 Si 0.938 3.062 19 H -0.249 1.249 20 H -0.251 1.251 21 H -0.247 1.247 22 C -0.079 4.079 23 C -0.066 4.066 24 Cl -0.051 7.051 25 H 0.053 0.947 26 H 0.053 0.947 27 H 0.059 0.941 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.055 0.945 31 H 0.061 0.939 32 H 0.052 0.948 33 H 0.054 0.946 34 H 0.066 0.934 35 H 0.075 0.925 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.073 0.927 39 H 0.066 0.934 40 H 0.079 0.921 41 H 0.069 0.931 42 H 0.077 0.923 43 H 0.078 0.922 44 H 0.140 0.860 45 H 0.138 0.862 46 H 0.121 0.879 47 H 0.377 0.623 48 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.619 0.426 3.206 3.293 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.417 4.417 3 C -0.194 4.194 4 C -0.191 4.191 5 Si 1.418 2.582 6 C -0.614 4.614 7 C -0.613 4.613 8 O -0.577 6.577 9 C 0.011 3.989 10 C -0.021 4.021 11 O -0.203 6.203 12 C 0.102 3.898 13 C -0.219 4.219 14 C -0.061 4.061 15 C -0.151 4.151 16 C -0.183 4.183 17 O -0.343 6.343 18 Si 0.761 3.239 19 H -0.172 1.172 20 H -0.175 1.175 21 H -0.171 1.171 22 C -0.097 4.097 23 C -0.093 4.093 24 Cl -0.022 7.022 25 H 0.072 0.928 26 H 0.072 0.928 27 H 0.078 0.922 28 H 0.075 0.925 29 H 0.075 0.925 30 H 0.074 0.926 31 H 0.080 0.920 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.085 0.915 35 H 0.094 0.906 36 H 0.092 0.908 37 H 0.093 0.907 38 H 0.092 0.908 39 H 0.085 0.915 40 H 0.097 0.903 41 H 0.087 0.913 42 H 0.096 0.904 43 H 0.096 0.904 44 H 0.158 0.842 45 H 0.156 0.844 46 H 0.138 0.862 47 H 0.224 0.776 48 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -0.755 0.036 2.128 2.258 hybrid contribution 0.557 0.919 0.552 1.208 sum -0.197 0.955 2.680 2.852 Atomic orbital electron populations 1.21510 0.93848 1.01976 1.01745 1.25770 1.00640 1.02573 1.12757 1.21557 1.00782 0.94926 1.02114 1.21506 1.00618 1.00342 0.96647 0.76734 0.63118 0.53334 0.65030 1.27045 1.07010 1.09615 1.17682 1.27028 1.24995 1.04655 1.04577 1.85412 1.79072 1.45990 1.47210 1.22071 0.99437 0.89594 0.87773 1.23097 0.99292 0.92083 0.87581 1.86241 1.64199 1.22647 1.47167 1.18715 0.93345 0.84678 0.93047 1.21305 1.01385 0.97218 1.01985 1.20903 0.97122 0.92561 0.95520 1.20137 0.99700 0.97672 0.97581 1.24853 1.06488 0.87964 0.98998 1.86514 1.30097 1.68545 1.49167 0.85834 0.80146 0.81055 0.76870 1.17206 1.17457 1.17110 1.20798 0.96694 0.92743 0.99465 1.20049 1.00133 0.93998 0.95146 1.98390 1.57699 1.81725 1.64417 0.92751 0.92803 0.92183 0.92522 0.92498 0.92559 0.92029 0.92849 0.92727 0.91518 0.90628 0.90842 0.90738 0.90776 0.91523 0.90316 0.91341 0.90440 0.90399 0.84216 0.84450 0.86169 0.77563 0.84724 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.03 7.85 37.16 0.29 0.26 16 2 C -0.37 0.01 0.53 -90.62 -0.05 -0.04 16 3 C -0.14 0.06 7.85 37.15 0.29 0.35 16 4 C -0.13 -0.11 7.85 37.16 0.29 0.18 16 5 Si 1.29 -1.39 8.45 -169.99 -1.44 -2.82 16 6 C -0.51 0.66 8.50 101.05 0.86 1.51 16 7 C -0.51 0.23 8.50 101.05 0.86 1.08 16 8 O -0.62 -0.16 8.52 -40.08 -0.34 -0.50 16 9 C 0.09 -0.14 5.51 37.16 0.20 0.06 16 10 C 0.05 -0.08 5.12 37.16 0.19 0.12 16 11 O -0.29 -0.54 9.56 -24.35 -0.23 -0.77 16 12 C 0.15 0.26 6.68 -39.20 -0.26 0.00 16 13 C -0.20 0.04 9.04 -39.44 -0.36 -0.31 16 14 C -0.04 0.02 9.60 -39.60 -0.38 -0.36 16 15 C -0.15 -0.01 5.39 -104.60 -0.56 -0.57 16 16 C -0.07 0.07 2.82 36.01 0.10 0.17 16 17 O -0.54 0.25 12.77 -35.23 -0.45 -0.20 16 18 Si 0.94 -0.58 25.07 -169.99 -4.26 -4.84 16 19 H -0.25 0.08 7.11 56.52 0.40 0.49 16 20 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 21 H -0.25 -0.03 7.11 56.52 0.40 0.38 16 22 C -0.08 -0.09 8.45 -39.57 -0.33 -0.42 16 23 C -0.07 -0.16 6.33 -39.36 -0.25 -0.41 16 24 Cl -0.05 -0.16 28.51 -51.86 -1.48 -1.64 16 25 H 0.05 -0.03 7.79 -51.92 -0.40 -0.44 16 26 H 0.05 0.03 8.14 -51.93 -0.42 -0.39 16 27 H 0.06 0.03 7.97 -51.93 -0.41 -0.38 16 28 H 0.06 -0.06 7.79 -51.93 -0.40 -0.46 16 29 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.06 -0.07 7.79 -51.92 -0.40 -0.47 16 31 H 0.06 0.09 7.96 -51.93 -0.41 -0.32 16 32 H 0.05 0.05 8.14 -51.93 -0.42 -0.37 16 33 H 0.05 0.02 7.79 -51.93 -0.40 -0.39 16 34 H 0.07 -0.13 7.48 -51.93 -0.39 -0.52 16 35 H 0.07 -0.10 7.79 -51.93 -0.40 -0.50 16 36 H 0.07 -0.08 7.79 -51.93 -0.40 -0.48 16 37 H 0.07 0.03 7.79 -51.92 -0.40 -0.38 16 38 H 0.07 -0.06 7.79 -51.93 -0.40 -0.46 16 39 H 0.07 -0.06 7.48 -51.93 -0.39 -0.45 16 40 H 0.08 -0.33 7.21 -51.93 -0.37 -0.70 16 41 H 0.07 -0.15 7.21 -51.93 -0.37 -0.53 16 42 H 0.08 -0.16 7.66 -51.93 -0.40 -0.55 16 43 H 0.08 -0.29 7.66 -51.93 -0.40 -0.69 16 44 H 0.14 -0.36 6.30 -52.48 -0.33 -0.69 16 45 H 0.14 -0.24 8.06 -52.49 -0.42 -0.66 16 46 H 0.12 -0.23 7.96 -51.93 -0.41 -0.64 16 47 H 0.38 -1.32 8.70 45.56 0.40 -0.92 16 48 H 0.14 0.03 4.87 -52.49 -0.26 -0.23 16 LS Contribution 397.49 15.07 5.99 5.99 Total: 0.00 -5.33 397.49 -8.79 -14.12 By element: Atomic # 1 Polarization: -3.49 SS G_CDS: -7.48 Total: -10.96 kcal Atomic # 6 Polarization: 0.74 SS G_CDS: 0.89 Total: 1.63 kcal Atomic # 8 Polarization: -0.45 SS G_CDS: -1.02 Total: -1.48 kcal Atomic # 14 Polarization: -1.97 SS G_CDS: -5.70 Total: -7.66 kcal Atomic # 17 Polarization: -0.16 SS G_CDS: -1.48 Total: -1.64 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -5.33 -8.79 -14.12 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_2162996_10264010.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.579 kcal (2) G-P(sol) polarization free energy of solvation -5.327 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.906 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.792 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.118 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.697 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds