Wall clock time and date at job start Tue Mar 9 2021 15:38:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86300 * 109.47098 * 2 1 4 4 C 1.86297 * 109.46974 * 240.00164 * 2 1 3 5 5 C 1.86294 * 109.47134 * 120.00118 * 2 1 3 6 6 O 1.42908 * 109.47169 * 66.58537 * 5 2 1 7 7 C 1.35901 * 116.99395 * 282.04039 * 6 5 2 8 8 C 1.38711 * 120.06110 * 353.84507 * 7 6 5 9 9 C 1.38166 * 119.94674 * 179.97438 * 8 7 6 10 10 C 1.50699 * 119.97079 * 179.97438 * 9 8 7 11 11 O 1.42894 * 109.47302 * 300.02150 * 10 9 8 12 12 Si 1.86302 * 109.47033 * 180.02562 * 10 9 8 13 13 H 1.48504 * 109.46837 * 60.00122 * 12 10 9 14 14 H 1.48495 * 109.47090 * 179.97438 * 12 10 9 15 15 H 1.48500 * 109.47265 * 300.00227 * 12 10 9 16 16 C 1.38246 * 120.05238 * 359.97438 * 9 8 7 17 17 C 1.38286 * 120.11539 * 0.02562 * 16 9 8 18 18 C 1.38126 * 120.05201 * 0.24951 * 17 16 9 19 19 N 1.48004 * 120.02283 * 179.74463 * 18 17 16 20 20 O 1.21800 * 120.00553 * 359.97438 * 19 18 17 21 21 O 1.21807 * 119.99823 * 180.02562 * 19 18 17 22 22 H 1.09002 * 109.46767 * 295.58558 * 1 2 3 23 23 H 1.09000 * 109.47237 * 55.58557 * 1 2 3 24 24 H 1.08996 * 109.46967 * 175.58506 * 1 2 3 25 25 H 1.09002 * 109.46740 * 180.02562 * 3 2 1 26 26 H 1.08992 * 109.47238 * 299.99828 * 3 2 1 27 27 H 1.09004 * 109.47060 * 60.00486 * 3 2 1 28 28 H 1.09004 * 109.47550 * 305.00431 * 4 2 1 29 29 H 1.09003 * 109.47059 * 65.00279 * 4 2 1 30 30 H 1.08997 * 109.47321 * 185.00044 * 4 2 1 31 31 H 1.08995 * 109.47379 * 306.58154 * 5 2 1 32 32 H 1.09007 * 109.47021 * 186.57869 * 5 2 1 33 33 H 1.08007 * 120.02404 * 0.02562 * 8 7 6 34 34 H 1.09001 * 109.47144 * 60.01864 * 10 9 8 35 35 H 0.96700 * 114.00500 * 180.02562 * 11 10 9 36 36 H 1.08007 * 119.93885 * 179.97438 * 16 9 8 37 37 H 1.07996 * 119.97282 * 179.97438 * 17 16 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8782 -1.5211 5 6 2.4840 -0.8782 1.5211 6 8 2.1380 -2.2628 1.4464 7 6 0.8531 -2.5942 1.7397 8 6 -0.0223 -1.6288 2.2148 9 6 -1.3283 -1.9682 2.5118 10 6 -2.2797 -0.9200 3.0285 11 8 -1.7756 -0.3808 4.2520 12 14 -3.9486 -1.6909 3.3307 13 1 -3.8173 -2.7779 4.3340 14 1 -4.8859 -0.6581 3.8405 15 1 -4.4725 -2.2514 2.0593 16 6 -1.7629 -3.2687 2.3353 17 6 -0.8921 -4.2330 1.8619 18 6 0.4160 -3.9000 1.5689 19 7 1.3489 -4.9338 1.0675 20 8 0.9634 -6.0789 0.9136 21 8 2.5024 -4.6397 0.8098 22 1 -0.3633 0.4438 0.9269 23 1 -0.3634 0.5808 -0.8478 24 1 -0.3633 -1.0246 -0.0791 25 1 3.5740 1.7564 -0.0005 26 1 2.1207 2.2703 -0.8899 27 1 2.1207 2.2703 0.8901 28 1 2.0493 -1.8767 -1.5672 29 1 2.1956 -0.3152 -2.4089 30 1 3.5703 -0.9564 -1.4776 31 1 2.0277 -0.4370 2.4071 32 1 3.5677 -0.7774 1.5819 33 1 0.3164 -0.6124 2.3516 34 1 -2.3759 -0.1220 2.2922 35 1 -2.3388 0.3013 4.6429 36 1 -2.7841 -3.5321 2.5685 37 1 -1.2340 -5.2483 1.7253 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_2392260_3095236.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:38:28 Heat of formation + Delta-G solvation = -71.496022 kcal Electronic energy + Delta-G solvation = -21566.748653 eV Core-core repulsion = 18244.261433 eV Total energy + Delta-G solvation = -3322.487220 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 285.104 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -42.98615 -41.54000 -39.39397 -37.77857 -37.13165 -33.70712 -31.94396 -29.97278 -28.88406 -28.61157 -28.50605 -28.12268 -25.44881 -23.76533 -22.75771 -20.45775 -19.42411 -18.95820 -18.57093 -18.27848 -17.58432 -16.97670 -16.83038 -16.28346 -16.04836 -15.07550 -14.89864 -14.57268 -14.38322 -14.21096 -14.14316 -14.00218 -13.60239 -13.51292 -13.34681 -13.22678 -13.10703 -12.86164 -12.69980 -12.29028 -12.21967 -12.03955 -11.78347 -11.76984 -11.16010 -11.10555 -11.01987 -10.83997 -10.48332 -9.57916 -1.08371 -0.17469 0.41173 0.60874 0.82062 1.19902 1.21722 1.27440 1.41181 1.53577 1.66722 1.98221 2.04645 2.30312 2.86955 3.19117 3.27655 3.56284 3.69453 3.74654 3.93572 4.00412 4.24039 4.40853 4.43284 4.47854 4.50252 4.52845 4.53691 4.58203 4.69328 4.70401 4.85417 5.04809 5.23535 5.31412 5.48446 5.54684 5.87142 6.23012 6.95450 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.454 4.454 2 Si 0.989 3.011 3 C -0.445 4.445 4 C -0.443 4.443 5 C -0.258 4.258 6 O -0.254 6.254 7 C 0.192 3.808 8 C -0.183 4.183 9 C 0.015 3.985 10 C -0.094 4.094 11 O -0.541 6.541 12 Si 0.943 3.057 13 H -0.242 1.242 14 H -0.250 1.250 15 H -0.244 1.244 16 C -0.165 4.165 17 C -0.012 4.012 18 C -0.082 4.082 19 N 0.035 4.965 20 O -0.178 6.178 21 O -0.135 6.135 22 H 0.074 0.926 23 H 0.077 0.923 24 H 0.070 0.930 25 H 0.074 0.926 26 H 0.076 0.924 27 H 0.072 0.928 28 H 0.070 0.930 29 H 0.071 0.929 30 H 0.074 0.926 31 H 0.079 0.921 32 H 0.121 0.879 33 H 0.161 0.839 34 H 0.090 0.910 35 H 0.387 0.613 36 H 0.144 0.856 37 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.451 7.004 0.850 8.342 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.562 4.562 2 Si 1.185 2.815 3 C -0.554 4.554 4 C -0.552 4.552 5 C -0.378 4.378 6 O -0.164 6.164 7 C 0.142 3.858 8 C -0.202 4.202 9 C 0.014 3.986 10 C -0.204 4.204 11 O -0.348 6.348 12 Si 0.764 3.236 13 H -0.165 1.165 14 H -0.173 1.173 15 H -0.167 1.167 16 C -0.183 4.183 17 C -0.031 4.031 18 C -0.167 4.167 19 N 0.554 4.446 20 O -0.388 6.388 21 O -0.356 6.356 22 H 0.093 0.907 23 H 0.096 0.904 24 H 0.089 0.911 25 H 0.093 0.907 26 H 0.095 0.905 27 H 0.091 0.909 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.093 0.907 31 H 0.097 0.903 32 H 0.140 0.860 33 H 0.179 0.821 34 H 0.108 0.892 35 H 0.235 0.765 36 H 0.162 0.838 37 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -5.053 6.518 1.104 8.321 hybrid contribution 0.254 0.515 0.090 0.581 sum -4.799 7.033 1.195 8.597 Atomic orbital electron populations 1.26482 1.19860 1.04828 1.04996 0.79870 0.67908 0.67159 0.66557 1.26017 1.06718 1.17598 1.05023 1.26002 1.06807 1.08075 1.14303 1.28509 1.08104 0.84776 1.16373 1.86382 1.21800 1.27298 1.80882 1.18707 0.85703 0.90893 0.90501 1.21247 0.93428 1.00655 1.04871 1.19449 0.93638 0.93333 0.92138 1.24883 1.06356 0.99404 0.89770 1.86488 1.51992 1.59618 1.36669 0.85749 0.74236 0.81276 0.82357 1.16471 1.17326 1.16720 1.20894 1.00874 0.91822 1.04756 1.20837 0.88921 1.01807 0.91521 1.20535 0.92189 0.86844 1.17091 1.43299 1.01477 1.01416 0.98437 1.94547 1.81953 1.04494 1.57770 1.94607 1.01829 1.86650 1.52495 0.90734 0.90371 0.91063 0.90712 0.90479 0.90921 0.91032 0.90956 0.90656 0.90265 0.86038 0.82137 0.89217 0.76462 0.83849 0.81840 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.34 7.04 101.05 0.71 2.06 16 2 Si 0.99 -3.22 11.68 -169.99 -1.99 -5.20 16 3 C -0.45 1.45 8.65 101.05 0.87 2.32 16 4 C -0.44 0.38 8.65 101.05 0.87 1.25 16 5 C -0.26 0.44 5.31 101.05 0.54 0.98 16 6 O -0.25 -0.52 7.81 -41.55 -0.32 -0.84 16 7 C 0.19 0.35 5.77 -39.22 -0.23 0.12 16 8 C -0.18 0.08 5.21 -39.43 -0.21 -0.13 16 9 C 0.01 -0.01 5.42 -104.65 -0.57 -0.58 16 10 C -0.09 0.29 2.81 36.00 0.10 0.39 16 11 O -0.54 1.45 12.74 -35.23 -0.45 1.00 16 12 Si 0.94 -2.75 25.07 -169.99 -4.26 -7.01 16 13 H -0.24 0.34 7.11 56.52 0.40 0.74 16 14 H -0.25 0.67 7.11 56.52 0.40 1.07 16 15 H -0.24 0.60 7.11 56.52 0.40 1.00 16 16 C -0.16 0.12 8.67 -39.56 -0.34 -0.22 16 17 C -0.01 -0.01 9.55 -39.60 -0.38 -0.39 16 18 C -0.08 -0.25 6.87 -79.80 -0.55 -0.80 16 19 N 0.04 0.21 4.45 34.03 0.15 0.36 16 20 O -0.18 -1.16 18.45 -29.46 -0.54 -1.70 16 21 O -0.13 -0.96 17.24 -36.49 -0.63 -1.59 16 22 H 0.07 -0.30 6.51 -51.93 -0.34 -0.64 16 23 H 0.08 -0.25 7.96 -51.93 -0.41 -0.67 16 24 H 0.07 -0.13 6.55 -51.93 -0.34 -0.47 16 25 H 0.07 -0.23 7.96 -51.93 -0.41 -0.65 16 26 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 27 H 0.07 -0.27 7.96 -51.93 -0.41 -0.68 16 28 H 0.07 0.05 7.96 -51.93 -0.41 -0.36 16 29 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 30 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 31 H 0.08 -0.24 6.06 -51.93 -0.31 -0.56 16 32 H 0.12 -0.34 7.96 -51.93 -0.41 -0.75 16 33 H 0.16 -0.41 4.24 -52.48 -0.22 -0.63 16 34 H 0.09 -0.47 7.96 -51.93 -0.41 -0.89 16 35 H 0.39 -2.69 8.74 45.56 0.40 -2.29 16 36 H 0.14 -0.38 4.87 -52.48 -0.26 -0.64 16 37 H 0.16 -0.15 7.61 -52.49 -0.40 -0.55 16 LS Contribution 308.96 15.07 4.66 4.66 Total: 0.00 -7.37 308.96 -6.55 -13.91 By element: Atomic # 1 Polarization: -4.60 SS G_CDS: -3.99 Total: -8.59 kcal Atomic # 6 Polarization: 4.18 SS G_CDS: 0.83 Total: 5.01 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: 0.15 Total: 0.36 kcal Atomic # 8 Polarization: -1.19 SS G_CDS: -1.95 Total: -3.14 kcal Atomic # 14 Polarization: -5.96 SS G_CDS: -6.25 Total: -12.21 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -7.37 -6.55 -13.91 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_2392260_3095236.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.585 kcal (2) G-P(sol) polarization free energy of solvation -7.365 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.950 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.546 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.911 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds