Wall clock time and date at job start Tue Mar 9 2021 15:51:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86299 * 1 3 3 C 1.86306 * 109.46854 * 2 1 4 4 C 1.86296 * 109.47126 * 240.00069 * 2 1 3 5 5 C 1.86305 * 109.46876 * 119.99784 * 2 1 3 6 6 O 1.42901 * 109.46994 * 66.31994 * 5 2 1 7 7 C 1.35902 * 117.00147 * 77.79061 * 6 5 2 8 8 C 1.38735 * 120.05136 * 186.05337 * 7 6 5 9 9 C 1.38142 * 119.93537 * 180.30628 * 8 7 6 10 10 C 1.38258 * 120.06227 * 359.46157 * 9 8 7 11 11 C 1.50697 * 119.94898 * 180.25672 * 10 9 8 12 12 O 1.42899 * 109.47420 * 245.25994 * 11 10 9 13 13 Si 1.86307 * 109.47020 * 5.26213 * 11 10 9 14 14 H 1.48497 * 109.47066 * 59.99730 * 13 11 10 15 15 H 1.48495 * 109.46997 * 179.97438 * 13 11 10 16 16 H 1.48497 * 109.46684 * 299.99696 * 13 11 10 17 17 C 1.38268 * 120.11119 * 0.52224 * 10 9 8 18 18 C 1.38153 * 120.05179 * 359.75681 * 17 10 9 19 19 H 1.08997 * 109.47843 * 299.99838 * 1 2 3 20 20 H 1.09005 * 109.47422 * 60.00083 * 1 2 3 21 21 H 1.08998 * 109.47087 * 179.97438 * 1 2 3 22 22 H 1.09004 * 109.46934 * 179.97438 * 3 2 1 23 23 H 1.08994 * 109.46871 * 299.99708 * 3 2 1 24 24 H 1.09001 * 109.46754 * 60.00021 * 3 2 1 25 25 H 1.09002 * 109.46947 * 294.67497 * 4 2 1 26 26 H 1.08994 * 109.47556 * 54.67934 * 4 2 1 27 27 H 1.09002 * 109.46698 * 174.68081 * 4 2 1 28 28 H 1.08993 * 109.47205 * 306.31437 * 5 2 1 29 29 H 1.09005 * 109.46642 * 186.31633 * 5 2 1 30 30 H 1.07991 * 120.02747 * 0.02723 * 8 7 6 31 31 H 1.08010 * 119.96640 * 179.70458 * 9 8 7 32 32 H 1.09001 * 109.46869 * 125.25909 * 11 10 9 33 33 H 0.96696 * 114.00229 * 59.99980 * 12 11 10 34 34 H 1.07997 * 119.97782 * 179.74348 * 17 10 9 35 35 H 1.08001 * 120.02336 * 179.97438 * 18 17 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4839 1.7565 0.0000 4 6 2.4840 -0.8782 -1.5211 5 6 2.4839 -0.8782 1.5212 6 8 2.1325 -2.2615 1.4495 7 6 2.8899 -3.0494 0.6416 8 6 2.5307 -4.3720 0.4261 9 6 3.3058 -5.1725 -0.3904 10 6 4.4323 -4.6537 -1.0015 11 6 5.2727 -5.5277 -1.8963 12 8 6.5640 -5.7066 -1.3111 13 14 4.4472 -7.1857 -2.0981 14 1 3.1053 -6.9997 -2.7063 15 1 5.2751 -8.0467 -2.9804 16 1 4.3031 -7.8318 -0.7689 17 6 4.7922 -3.3358 -0.7886 18 6 4.0236 -2.5326 0.0317 19 1 -0.3635 0.5138 0.8899 20 1 -0.3634 0.5138 -0.8900 21 1 -0.3633 -1.0276 -0.0005 22 1 3.5740 1.7566 0.0005 23 1 2.1206 2.2703 -0.8900 24 1 2.1205 2.2703 0.8900 25 1 2.2006 -1.9297 -1.4747 26 1 2.0450 -0.4224 -2.4085 27 1 3.5698 -0.7964 -1.5700 28 1 2.0313 -0.4338 2.4075 29 1 3.5681 -0.7813 1.5795 30 1 1.6486 -4.7765 0.8998 31 1 3.0292 -6.2036 -0.5548 32 1 5.3785 -5.0534 -2.8720 33 1 6.5463 -6.1244 -0.4393 34 1 5.6748 -2.9339 -1.2637 35 1 4.3054 -1.5034 0.1981 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26799_3095236.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:51:52 Heat of formation + Delta-G solvation = -78.500457 kcal Electronic energy + Delta-G solvation = -15602.834919 eV Core-core repulsion = 13111.060399 eV Total energy + Delta-G solvation = -2491.774520 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 240.109 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -41.26491 -39.04353 -37.08649 -32.28692 -31.85947 -29.75197 -28.53911 -28.41102 -28.02071 -25.99238 -23.69194 -22.14379 -19.25232 -18.19159 -17.30373 -16.75547 -16.47326 -16.09170 -15.64763 -15.07828 -14.80969 -14.47431 -14.31200 -14.02600 -13.91085 -13.81995 -13.55962 -13.39237 -13.30065 -13.13969 -12.91752 -12.73091 -12.20358 -12.09072 -11.99382 -11.48673 -10.99689 -10.91537 -10.75896 -10.35623 -9.91652 -8.94722 0.32734 0.40976 1.18477 1.41684 1.44599 1.53146 1.62688 1.69802 1.93252 2.43341 2.44434 2.74545 3.52047 3.75807 3.87074 3.91744 4.10187 4.31371 4.44308 4.56435 4.59087 4.60291 4.66507 4.68530 4.70495 4.71280 4.73778 4.77202 5.03997 5.25176 5.35316 5.38351 5.47864 5.53463 5.55192 5.74845 6.43467 6.58025 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 0.989 3.011 3 C -0.448 4.448 4 C -0.448 4.448 5 C -0.246 4.246 6 O -0.293 6.293 7 C 0.130 3.870 8 C -0.149 4.149 9 C -0.087 4.087 10 C -0.160 4.160 11 C -0.075 4.075 12 O -0.540 6.540 13 Si 0.946 3.054 14 H -0.250 1.250 15 H -0.255 1.255 16 H -0.252 1.252 17 C -0.051 4.051 18 C -0.202 4.202 19 H 0.069 0.931 20 H 0.070 0.930 21 H 0.072 0.928 22 H 0.070 0.930 23 H 0.074 0.926 24 H 0.071 0.929 25 H 0.074 0.926 26 H 0.070 0.930 27 H 0.073 0.927 28 H 0.108 0.892 29 H 0.072 0.928 30 H 0.133 0.867 31 H 0.125 0.875 32 H 0.116 0.884 33 H 0.376 0.624 34 H 0.129 0.871 35 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.485 1.573 0.093 1.649 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.186 2.814 3 C -0.556 4.556 4 C -0.556 4.556 5 C -0.366 4.366 6 O -0.206 6.206 7 C 0.084 3.916 8 C -0.168 4.168 9 C -0.105 4.105 10 C -0.161 4.161 11 C -0.185 4.185 12 O -0.345 6.345 13 Si 0.770 3.230 14 H -0.174 1.174 15 H -0.179 1.179 16 H -0.176 1.176 17 C -0.069 4.069 18 C -0.221 4.221 19 H 0.089 0.911 20 H 0.090 0.910 21 H 0.091 0.909 22 H 0.089 0.911 23 H 0.093 0.907 24 H 0.090 0.910 25 H 0.093 0.907 26 H 0.089 0.911 27 H 0.092 0.908 28 H 0.126 0.874 29 H 0.090 0.910 30 H 0.151 0.849 31 H 0.143 0.857 32 H 0.134 0.866 33 H 0.223 0.777 34 H 0.147 0.853 35 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.852 0.983 -0.400 1.361 hybrid contribution 0.131 0.420 0.649 0.784 sum -0.721 1.404 0.249 1.597 Atomic orbital electron populations 1.26028 1.19882 1.04848 1.04519 0.79830 0.68527 0.66840 0.66225 1.26073 1.06341 1.18298 1.04932 1.26434 1.06284 1.08304 1.14597 1.28187 1.05754 0.85072 1.17610 1.86029 1.53038 1.19686 1.61862 1.19075 0.90464 0.91166 0.90903 1.20344 1.02314 0.91533 1.02609 1.20841 0.94375 0.99221 0.96082 1.20155 0.97758 0.95925 1.02246 1.24878 0.87835 1.07436 0.98386 1.86507 1.26428 1.84052 1.37549 0.85736 0.79565 0.76363 0.81365 1.17373 1.17893 1.17585 1.20771 0.98072 0.92402 0.95632 1.21318 0.96776 1.01390 1.02575 0.91150 0.91047 0.90853 0.91064 0.90653 0.90999 0.90740 0.91133 0.90792 0.87393 0.90957 0.84867 0.85727 0.86641 0.77715 0.85285 0.84884 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.48 8.65 101.05 0.87 1.35 16 2 Si 0.99 -2.52 11.68 -169.99 -1.99 -4.51 16 3 C -0.45 1.03 8.65 101.05 0.87 1.91 16 4 C -0.45 0.51 7.03 101.05 0.71 1.22 16 5 C -0.25 0.30 5.31 101.05 0.54 0.83 16 6 O -0.29 -0.46 9.79 -19.43 -0.19 -0.65 16 7 C 0.13 0.20 5.16 -39.22 -0.20 0.00 16 8 C -0.15 -0.20 9.99 -39.43 -0.39 -0.60 16 9 C -0.09 -0.07 8.66 -39.61 -0.34 -0.41 16 10 C -0.16 -0.10 5.35 -104.60 -0.56 -0.66 16 11 C -0.07 0.01 2.80 36.00 0.10 0.12 16 12 O -0.54 -0.29 12.83 -35.23 -0.45 -0.75 16 13 Si 0.95 -0.30 25.14 -169.99 -4.27 -4.57 16 14 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 15 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 16 H -0.25 0.05 7.03 56.52 0.40 0.45 16 17 C -0.05 -0.03 9.68 -39.60 -0.38 -0.41 16 18 C -0.20 -0.09 5.61 -39.43 -0.22 -0.32 16 19 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 20 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 21 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 22 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 23 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 24 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 25 H 0.07 0.02 6.25 -51.93 -0.32 -0.31 16 26 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 27 H 0.07 -0.11 6.54 -51.93 -0.34 -0.45 16 28 H 0.11 -0.24 7.96 -51.93 -0.41 -0.66 16 29 H 0.07 -0.14 6.08 -51.93 -0.32 -0.46 16 30 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 31 H 0.13 -0.07 4.86 -52.48 -0.25 -0.33 16 32 H 0.12 -0.11 7.96 -51.93 -0.41 -0.52 16 33 H 0.38 -0.94 8.70 45.56 0.40 -0.54 16 34 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 35 H 0.13 -0.19 4.74 -52.49 -0.25 -0.44 16 LS Contribution 282.53 15.07 4.26 4.26 Total: 0.00 -4.46 282.53 -6.11 -10.57 By element: Atomic # 1 Polarization: -2.92 SS G_CDS: -4.45 Total: -7.37 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: 0.99 Total: 3.02 kcal Atomic # 8 Polarization: -0.75 SS G_CDS: -0.64 Total: -1.39 kcal Atomic # 14 Polarization: -2.82 SS G_CDS: -6.26 Total: -9.08 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -4.46 -6.11 -10.57 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26799_3095236.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.932 kcal (2) G-P(sol) polarization free energy of solvation -4.463 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.395 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.105 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -10.568 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.500 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds