Wall clock time and date at job start Tue Mar 9 2021 15:52:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53005 * 109.47425 * 2 1 4 4 C 1.53004 * 109.46862 * 240.00074 * 2 1 3 5 5 O 1.45192 * 109.47335 * 120.00352 * 2 1 3 6 6 C 1.34642 * 117.00255 * 59.99455 * 5 2 1 7 7 O 1.21512 * 119.99518 * 0.02562 * 6 5 2 8 8 N 1.34771 * 119.99897 * 179.97438 * 6 5 2 9 9 C 1.46500 * 119.99744 * 179.97438 * 8 6 5 10 10 H 1.09001 * 112.85323 * 336.20412 * 9 8 6 11 11 C 1.53780 * 113.61387 * 107.50536 * 9 8 6 12 12 C 1.53779 * 87.08186 * 89.11888 * 11 9 8 13 13 H 1.08996 * 113.69080 * 270.87449 * 12 11 9 14 14 C 1.53001 * 113.61744 * 139.98128 * 12 11 9 15 15 O 1.42904 * 109.46836 * 87.50335 * 14 12 11 16 16 C 1.35906 * 116.99563 * 180.02562 * 15 14 12 17 17 C 1.38711 * 120.04992 * 179.97438 * 16 15 14 18 18 C 1.50694 * 120.03053 * 0.02562 * 17 16 15 19 19 O 1.42908 * 109.46882 * 285.01405 * 18 17 16 20 20 Si 1.86299 * 109.47321 * 165.02126 * 18 17 16 21 21 C 1.38169 * 119.94094 * 180.02562 * 17 16 15 22 22 C 1.38242 * 120.05494 * 0.03192 * 21 17 16 23 23 C 1.38295 * 120.11401 * 359.94904 * 22 21 17 24 24 C 1.38122 * 120.05026 * 0.02562 * 23 22 21 25 25 C 1.53780 * 113.61703 * 205.00340 * 9 8 6 26 26 H 1.09007 * 109.47109 * 299.99810 * 1 2 3 27 27 H 1.09005 * 109.47362 * 59.99227 * 1 2 3 28 28 H 1.08995 * 109.47434 * 179.97438 * 1 2 3 29 29 H 1.08995 * 109.47274 * 180.02562 * 3 2 1 30 30 H 1.09002 * 109.46768 * 300.00519 * 3 2 1 31 31 H 1.08998 * 109.46706 * 59.99779 * 3 2 1 32 32 H 1.08995 * 109.47138 * 300.00233 * 4 2 1 33 33 H 1.09006 * 109.47285 * 60.00364 * 4 2 1 34 34 H 1.08995 * 109.47131 * 180.02562 * 4 2 1 35 35 H 0.97001 * 120.00745 * 0.02562 * 8 6 5 36 36 H 1.09004 * 113.61666 * 334.56876 * 11 9 8 37 37 H 1.09000 * 113.61427 * 203.66407 * 11 9 8 38 38 H 1.09005 * 109.46930 * 327.50318 * 14 12 11 39 39 H 1.08999 * 109.47210 * 207.50248 * 14 12 11 40 40 H 1.08994 * 109.47590 * 45.02102 * 18 17 16 41 41 H 0.96703 * 113.99965 * 180.02562 * 19 18 17 42 42 H 1.48502 * 110.00389 * 59.99383 * 20 18 17 43 43 H 1.48496 * 110.00555 * 181.31572 * 20 18 17 44 44 H 1.07998 * 119.97347 * 179.97438 * 21 17 16 45 45 H 1.07997 * 119.94707 * 179.97438 * 22 21 17 46 46 H 1.07997 * 119.97026 * 179.74858 * 23 22 21 47 47 H 1.08002 * 120.02294 * 179.97438 * 24 23 22 48 48 H 1.09001 * 113.61548 * 156.33812 * 25 9 8 49 49 H 1.08999 * 113.61316 * 25.43530 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0399 -0.7213 -1.2493 5 8 2.0140 -0.6845 1.1854 6 6 1.6522 -1.9724 1.3383 7 8 0.9515 -2.5097 0.5035 8 7 2.0681 -2.6657 2.4165 9 6 1.6739 -4.0668 2.5830 10 1 0.7591 -4.3160 2.0453 11 6 2.8215 -5.0622 2.3441 12 6 3.1501 -4.9214 3.8397 13 1 3.8470 -4.1131 4.0609 14 6 3.5396 -6.2412 4.5086 15 8 4.9451 -6.4535 4.3607 16 6 5.4577 -7.5898 4.9022 17 6 6.8141 -7.8595 4.7953 18 6 7.7212 -6.8926 4.0791 19 8 7.5219 -7.0080 2.6687 20 14 9.4955 -7.2852 4.4895 21 6 7.3328 -9.0156 5.3462 22 6 6.5010 -9.9034 6.0028 23 6 5.1484 -9.6365 6.1110 24 6 4.6252 -8.4819 5.5625 25 6 1.6755 -4.5375 4.0470 26 1 -0.3634 0.5138 0.8901 27 1 -0.3634 0.5140 -0.8899 28 1 -0.3634 -1.0276 -0.0005 29 1 3.1300 1.4425 -0.0005 30 1 1.6766 1.9564 -0.8900 31 1 1.6767 1.9563 0.8900 32 1 1.6765 -1.7489 -1.2493 33 1 1.6766 -0.2074 -2.1393 34 1 3.1299 -0.7217 -1.2491 35 1 2.6277 -2.2370 3.0827 36 1 3.6025 -4.6787 1.6874 37 1 2.4831 -6.0596 2.0634 38 1 2.9968 -7.0611 4.0381 39 1 3.2880 -6.1997 5.5683 40 1 7.4914 -5.8755 4.3965 41 1 8.0749 -6.4136 2.1433 42 1 9.8216 -8.6694 4.0617 43 1 10.3989 -6.3190 3.8145 44 1 8.3887 -9.2264 5.2629 45 1 6.9082 -10.8067 6.4324 46 1 4.5001 -10.3336 6.6209 47 1 3.5687 -8.2741 5.6469 48 1 1.0238 -5.3914 4.2319 49 1 1.5313 -3.7303 4.7653 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26800_15734082.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:52:43 Heat of formation + Delta-G solvation = -94.403122 kcal Electronic energy + Delta-G solvation = -29256.547909 eV Core-core repulsion = 25151.822230 eV Total energy + Delta-G solvation = -4104.725679 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.88932 -41.33021 -40.37842 -38.50289 -37.68194 -37.49176 -35.25156 -34.07439 -32.79121 -31.12613 -29.28808 -28.31839 -28.27577 -26.88164 -26.57082 -24.96189 -23.54520 -22.75162 -22.19663 -21.08004 -20.33603 -19.25402 -19.04517 -18.43233 -17.58539 -17.30709 -17.07819 -16.97012 -16.77344 -16.48725 -16.05057 -15.54387 -15.45290 -15.33634 -15.09523 -15.01675 -14.76605 -14.36267 -14.16911 -13.79974 -13.76054 -13.52890 -13.39813 -13.38338 -13.10451 -12.95537 -12.83881 -12.81621 -12.64060 -12.43183 -12.25518 -12.12913 -12.04702 -11.77182 -11.66678 -11.61636 -11.30480 -11.27639 -10.95795 -10.33805 -10.17108 -9.91775 -9.10945 -4.93515 0.28122 0.50260 1.16708 1.33310 1.61413 1.88051 1.96981 2.15390 2.71053 3.10701 3.27800 3.37714 3.47741 3.67328 3.69058 3.78808 3.82143 3.84509 3.91895 3.98237 4.11700 4.13292 4.19725 4.29562 4.33196 4.43058 4.48905 4.53782 4.55795 4.57544 4.58173 4.64106 4.69047 4.76817 4.79176 4.87896 4.91542 4.94353 4.96437 5.00697 5.02374 5.10214 5.34525 5.35830 5.37909 5.41701 5.50263 5.56015 5.62037 5.80157 6.41481 6.43605 6.57705 7.43479 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.185 4.185 5 O -0.365 6.365 6 C 0.653 3.347 7 O -0.564 6.564 8 N -0.695 5.695 9 C 0.137 3.863 10 H 0.111 0.889 11 C -0.144 4.144 12 C -0.110 4.110 13 H 0.102 0.898 14 C 0.067 3.933 15 O -0.303 6.303 16 C 0.155 3.845 17 C -0.108 4.108 18 C -0.063 4.063 19 O -0.531 6.531 20 Si 0.684 3.316 21 C -0.079 4.079 22 C -0.154 4.154 23 C -0.073 4.073 24 C -0.211 4.211 25 C -0.135 4.135 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.407 0.593 36 H 0.077 0.923 37 H 0.096 0.904 38 H 0.065 0.935 39 H 0.065 0.935 40 H 0.074 0.926 41 H 0.376 0.624 42 H -0.255 1.255 43 H -0.262 1.262 44 H 0.133 0.867 45 H 0.128 0.872 46 H 0.128 0.872 47 H 0.129 0.871 48 H 0.103 0.897 49 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.133 1.434 4.420 4.649 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.242 4.242 5 O -0.280 6.280 6 C 0.407 3.593 7 O -0.453 6.453 8 N -0.353 5.353 9 C 0.033 3.967 10 H 0.129 0.871 11 C -0.183 4.183 12 C -0.128 4.128 13 H 0.120 0.880 14 C -0.008 4.008 15 O -0.216 6.216 16 C 0.109 3.891 17 C -0.108 4.108 18 C -0.172 4.172 19 O -0.338 6.338 20 Si 0.585 3.415 21 C -0.097 4.097 22 C -0.172 4.172 23 C -0.091 4.091 24 C -0.230 4.230 25 C -0.173 4.173 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.242 0.758 36 H 0.095 0.905 37 H 0.114 0.886 38 H 0.084 0.916 39 H 0.083 0.917 40 H 0.092 0.908 41 H 0.223 0.777 42 H -0.180 1.180 43 H -0.187 1.187 44 H 0.150 0.850 45 H 0.146 0.854 46 H 0.145 0.855 47 H 0.147 0.853 48 H 0.121 0.879 49 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.211 0.746 3.710 3.790 hybrid contribution -0.132 0.501 -0.762 0.921 sum 0.079 1.246 2.948 3.202 Atomic orbital electron populations 1.22525 0.93822 1.05061 1.02727 1.22123 0.94457 0.91545 0.81834 1.21881 1.02340 0.92342 1.03347 1.22526 1.01622 1.03474 0.96544 1.86304 1.71476 1.23400 1.46787 1.18057 0.78621 0.80565 0.82098 1.90920 1.40931 1.70507 1.42925 1.44351 1.55443 1.11664 1.23886 1.21764 0.99111 0.78602 0.97264 0.87121 1.23543 0.98675 1.00114 0.95976 1.22642 0.96843 0.96843 0.96460 0.87958 1.22875 0.79737 0.97628 1.00555 1.86124 1.24526 1.37730 1.73188 1.18746 0.92016 0.86022 0.92309 1.18577 0.91288 0.97381 1.03599 1.24599 1.08752 1.00559 0.83326 1.86626 1.65702 1.65577 1.15908 0.95147 0.74247 0.80265 0.91815 1.20968 1.00126 0.92281 0.96291 1.21027 0.93654 1.00382 1.02149 1.21028 0.95381 0.95821 0.96874 1.21284 1.00026 0.97024 1.04682 1.23366 0.95585 1.02171 0.96214 0.92103 0.90911 0.89422 0.91394 0.89913 0.91380 0.89409 0.90908 0.92122 0.75826 0.90453 0.88604 0.91644 0.91676 0.90833 0.77669 1.18001 1.18704 0.84978 0.85355 0.85453 0.85283 0.87882 0.89902 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.27 8.37 37.16 0.31 0.04 16 2 C 0.14 0.21 1.13 -90.62 -0.10 0.11 16 3 C -0.14 0.07 8.85 37.16 0.33 0.40 16 4 C -0.18 -0.31 8.37 37.16 0.31 0.00 16 5 O -0.36 -0.97 9.94 -40.33 -0.40 -1.37 16 6 C 0.65 1.99 8.06 54.05 0.44 2.42 16 7 O -0.56 -3.03 11.48 -19.28 -0.22 -3.26 16 8 N -0.69 -0.09 5.27 -57.93 -0.31 -0.39 16 9 C 0.14 -0.10 4.32 -67.12 -0.29 -0.39 16 10 H 0.11 0.06 7.46 -51.93 -0.39 -0.33 16 11 C -0.14 0.09 7.43 -25.92 -0.19 -0.10 16 12 C -0.11 0.20 3.89 -89.81 -0.35 -0.15 16 13 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 14 C 0.07 -0.06 4.58 37.16 0.17 0.11 16 15 O -0.30 -0.66 9.47 -19.44 -0.18 -0.84 16 16 C 0.16 0.40 6.66 -39.22 -0.26 0.14 16 17 C -0.11 -0.28 5.30 -104.48 -0.55 -0.83 16 18 C -0.06 -0.10 2.37 36.00 0.09 -0.01 16 19 O -0.53 -1.55 12.86 -35.23 -0.45 -2.01 16 20 Si 0.68 -0.05 30.20 -169.99 -5.13 -5.18 16 21 C -0.08 -0.11 8.66 -39.61 -0.34 -0.46 16 22 C -0.15 -0.09 10.04 -39.56 -0.40 -0.49 16 23 C -0.07 -0.03 10.04 -39.60 -0.40 -0.43 16 24 C -0.21 -0.22 9.04 -39.44 -0.36 -0.57 16 25 C -0.14 0.41 7.39 -25.92 -0.19 0.22 16 26 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 27 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.09 0.31 5.88 -51.93 -0.31 0.01 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.09 0.34 5.88 -51.93 -0.31 0.03 16 33 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 34 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 35 H 0.41 -0.73 8.81 -40.82 -0.36 -1.09 16 36 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 37 H 0.10 -0.08 7.90 -51.93 -0.41 -0.49 16 38 H 0.07 -0.09 7.36 -51.93 -0.38 -0.47 16 39 H 0.07 -0.14 7.66 -51.93 -0.40 -0.54 16 40 H 0.07 0.06 7.83 -51.93 -0.41 -0.35 16 41 H 0.38 -0.38 8.74 45.56 0.40 0.02 16 42 H -0.26 -0.64 6.75 56.52 0.38 -0.26 16 43 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 44 H 0.13 0.01 4.90 -52.49 -0.26 -0.24 16 45 H 0.13 -0.19 8.06 -52.49 -0.42 -0.61 16 46 H 0.13 -0.22 8.06 -52.49 -0.42 -0.65 16 47 H 0.13 -0.12 6.30 -52.49 -0.33 -0.46 16 48 H 0.10 -0.41 8.10 -51.93 -0.42 -0.84 16 49 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 LS Contribution 391.93 15.07 5.91 5.91 Total: 0.00 -7.72 391.93 -10.44 -18.16 By element: Atomic # 1 Polarization: -3.16 SS G_CDS: -7.86 Total: -11.01 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -1.79 Total: 0.00 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.31 Total: -0.39 kcal Atomic # 8 Polarization: -6.22 SS G_CDS: -1.26 Total: -7.48 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: -5.13 Total: -5.18 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -7.72 -10.44 -18.16 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26800_15734082.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.242 kcal (2) G-P(sol) polarization free energy of solvation -7.720 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.440 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.161 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds