Wall clock time and date at job start Tue Mar 9 2021 15:52:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52998 * 109.47334 * 2 1 4 4 C 1.53000 * 109.47232 * 239.99586 * 2 1 3 5 5 O 1.45206 * 109.46784 * 119.99759 * 2 1 3 6 6 C 1.34629 * 116.99837 * 60.00144 * 5 2 1 7 7 O 1.21511 * 120.00556 * 359.97438 * 6 5 2 8 8 N 1.34782 * 119.99817 * 180.02562 * 6 5 2 9 9 C 1.46505 * 120.00050 * 179.97438 * 8 6 5 10 10 H 1.08997 * 112.90495 * 23.74673 * 9 8 6 11 11 C 1.53779 * 113.61253 * 154.99702 * 9 8 6 12 12 C 1.53787 * 87.07927 * 139.97957 * 11 9 8 13 13 H 1.09001 * 113.61348 * 89.19842 * 12 11 9 14 14 C 1.53000 * 113.61585 * 220.01823 * 12 11 9 15 15 O 1.42895 * 109.46907 * 185.00347 * 14 12 11 16 16 C 1.35901 * 117.00002 * 180.02562 * 15 14 12 17 17 C 1.38709 * 120.05787 * 180.02562 * 16 15 14 18 18 C 1.50696 * 120.02762 * 359.95504 * 17 16 15 19 19 O 1.42903 * 109.46812 * 284.99740 * 18 17 16 20 20 Si 1.86303 * 109.47122 * 165.00264 * 18 17 16 21 21 C 1.38171 * 119.94081 * 179.97438 * 17 16 15 22 22 C 1.38240 * 120.06065 * 0.02562 * 21 17 16 23 23 C 1.38295 * 120.10794 * 0.02562 * 22 21 17 24 24 C 1.38120 * 120.05704 * 359.97438 * 23 22 21 25 25 C 1.53774 * 113.61243 * 252.49515 * 9 8 6 26 26 H 1.08995 * 109.47162 * 300.01030 * 1 2 3 27 27 H 1.09003 * 109.46769 * 60.00197 * 1 2 3 28 28 H 1.08994 * 109.47095 * 180.02562 * 1 2 3 29 29 H 1.09003 * 109.46858 * 179.97438 * 3 2 1 30 30 H 1.08999 * 109.46750 * 299.99235 * 3 2 1 31 31 H 1.08988 * 109.47609 * 59.99694 * 3 2 1 32 32 H 1.09001 * 109.47040 * 300.00348 * 4 2 1 33 33 H 1.08999 * 109.47539 * 60.00344 * 4 2 1 34 34 H 1.09003 * 109.47388 * 180.02562 * 4 2 1 35 35 H 0.96992 * 120.00213 * 359.97438 * 8 6 5 36 36 H 1.08995 * 113.61797 * 25.43369 * 11 9 8 37 37 H 1.08997 * 113.69087 * 254.53829 * 11 9 8 38 38 H 1.09001 * 109.46974 * 64.99691 * 14 12 11 39 39 H 1.09003 * 109.46725 * 304.99753 * 14 12 11 40 40 H 1.08994 * 109.47600 * 44.99862 * 18 17 16 41 41 H 0.96698 * 114.00104 * 300.00361 * 19 18 17 42 42 H 1.48505 * 110.00066 * 179.97438 * 20 18 17 43 43 H 1.48498 * 109.99815 * 301.31442 * 20 18 17 44 44 H 1.08005 * 119.97011 * 180.02562 * 21 17 16 45 45 H 1.07995 * 119.94494 * 180.27435 * 22 21 17 46 46 H 1.07997 * 119.96986 * 179.97438 * 23 22 21 47 47 H 1.08001 * 120.02621 * 180.02562 * 24 23 22 48 48 H 1.09007 * 113.61410 * 105.47005 * 25 9 8 49 49 H 1.09002 * 113.61862 * 334.56500 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0139 -0.6845 1.1857 6 6 1.6522 -1.9722 1.3384 7 8 0.9508 -2.5094 0.5041 8 7 2.0671 -2.6653 2.4173 9 6 1.6729 -4.0665 2.5839 10 1 1.4195 -4.5509 1.6409 11 6 2.6458 -4.8809 3.4529 12 6 1.4079 -5.5534 4.0697 13 1 1.0829 -6.4452 3.5338 14 6 1.5193 -5.7751 5.5795 15 8 0.3801 -6.5052 6.0389 16 6 0.3227 -6.7874 7.3671 17 6 -0.7547 -7.4936 7.8814 18 6 -1.8638 -7.9480 6.9679 19 8 -2.6818 -6.8295 6.6188 20 14 -2.9005 -9.2277 7.8388 21 6 -0.8104 -7.7796 9.2320 22 6 0.2062 -7.3622 10.0707 23 6 1.2809 -6.6570 9.5605 24 6 1.3413 -6.3686 8.2111 25 6 0.6265 -4.2847 3.6893 26 1 -0.3633 0.5140 0.8898 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 3.1301 1.4424 0.0005 30 1 1.6768 1.9562 -0.8901 31 1 1.6768 1.9563 0.8898 32 1 1.6766 -1.7490 -1.2491 33 1 1.6768 -0.2076 -2.1392 34 1 3.1301 -0.7217 -1.2490 35 1 2.6266 -2.2365 3.0835 36 1 3.2114 -4.2747 4.1604 37 1 3.2753 -5.5641 2.8828 38 1 1.5615 -4.8109 6.0861 39 1 2.4253 -6.3403 5.7978 40 1 -1.4356 -8.3811 6.0640 41 1 -3.0962 -6.3938 7.3760 42 1 -3.9983 -9.6836 6.9486 43 1 -2.0550 -10.3822 8.2353 44 1 -1.6489 -8.3298 9.6329 45 1 0.1630 -7.5906 11.1253 46 1 2.0737 -6.3317 10.2178 47 1 2.1810 -5.8182 7.8132 48 1 -0.3750 -4.4864 3.3089 49 1 0.6401 -3.5156 4.4616 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26800_15734236.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:52:46 Heat of formation + Delta-G solvation = -99.728772 kcal Electronic energy + Delta-G solvation = -29092.649748 eV Core-core repulsion = 24987.693131 eV Total energy + Delta-G solvation = -4104.956617 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.82434 -41.38969 -40.33821 -38.55493 -37.69603 -37.38760 -35.28000 -34.19220 -32.68607 -31.17336 -29.27187 -28.30687 -28.26174 -26.87911 -26.61073 -25.05374 -23.39184 -22.65084 -22.06616 -21.35275 -20.53790 -19.30620 -18.96614 -18.12983 -17.65943 -17.11372 -17.03047 -16.99378 -16.78677 -16.33797 -16.12959 -15.83706 -15.43181 -15.29056 -15.27164 -14.97055 -14.55111 -14.32017 -14.20518 -13.95600 -13.65476 -13.46567 -13.39822 -13.24401 -13.03782 -12.95805 -12.81286 -12.80062 -12.57473 -12.43379 -12.27279 -12.19455 -12.05939 -11.95425 -11.87342 -11.64375 -11.36461 -11.26840 -10.92632 -10.29057 -10.12476 -9.98313 -9.16728 -4.99468 0.22034 0.43099 1.22390 1.36069 1.69549 1.90518 2.03650 2.12485 2.69456 3.14979 3.28996 3.37779 3.56785 3.65106 3.66496 3.75493 3.80314 3.85291 3.85830 3.99052 3.99708 4.10846 4.16971 4.19981 4.33432 4.36549 4.49176 4.52433 4.56502 4.58750 4.60075 4.65292 4.66566 4.76636 4.80329 4.84702 4.89799 4.95298 4.95712 4.99453 5.09108 5.12894 5.29151 5.32668 5.37011 5.39379 5.48822 5.51323 5.63089 5.74038 6.41618 6.44734 6.70738 7.45895 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.366 6.366 6 C 0.650 3.350 7 O -0.565 6.565 8 N -0.702 5.702 9 C 0.141 3.859 10 H 0.122 0.878 11 C -0.136 4.136 12 C -0.106 4.106 13 H 0.108 0.892 14 C 0.070 3.930 15 O -0.300 6.300 16 C 0.155 3.845 17 C -0.156 4.156 18 C -0.054 4.054 19 O -0.535 6.535 20 Si 0.680 3.320 21 C -0.076 4.076 22 C -0.154 4.154 23 C -0.073 4.073 24 C -0.212 4.212 25 C -0.145 4.145 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.406 0.594 36 H 0.092 0.908 37 H 0.085 0.915 38 H 0.065 0.935 39 H 0.065 0.935 40 H 0.112 0.888 41 H 0.374 0.626 42 H -0.254 1.254 43 H -0.257 1.257 44 H 0.134 0.866 45 H 0.129 0.871 46 H 0.127 0.873 47 H 0.129 0.871 48 H 0.081 0.919 49 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.483 1.953 4.531 5.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.281 6.281 6 C 0.404 3.596 7 O -0.454 6.454 8 N -0.360 5.360 9 C 0.037 3.963 10 H 0.140 0.860 11 C -0.174 4.174 12 C -0.125 4.125 13 H 0.126 0.874 14 C -0.005 4.005 15 O -0.213 6.213 16 C 0.109 3.891 17 C -0.157 4.157 18 C -0.165 4.165 19 O -0.339 6.339 20 Si 0.582 3.418 21 C -0.093 4.093 22 C -0.172 4.172 23 C -0.091 4.091 24 C -0.231 4.231 25 C -0.183 4.183 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.241 0.759 36 H 0.110 0.890 37 H 0.103 0.897 38 H 0.083 0.917 39 H 0.083 0.917 40 H 0.129 0.871 41 H 0.221 0.779 42 H -0.179 1.179 43 H -0.182 1.182 44 H 0.151 0.849 45 H 0.147 0.853 46 H 0.145 0.855 47 H 0.146 0.854 48 H 0.099 0.901 49 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 1.891 0.728 3.257 3.836 hybrid contribution 1.083 0.476 0.061 1.184 sum 2.974 1.204 3.317 4.615 Atomic orbital electron populations 1.22523 0.93827 1.05093 1.02705 1.22116 0.94466 0.91545 0.81863 1.21877 1.02303 0.92382 1.03336 1.22523 1.01575 1.03467 0.96560 1.86304 1.71505 1.23513 1.46743 1.18169 0.78694 0.80627 0.82130 1.90918 1.40804 1.70390 1.43313 1.44749 1.55524 1.12144 1.23596 1.22521 0.95591 0.78903 0.99311 0.85988 1.23397 0.96482 0.98804 0.98730 1.22323 0.97618 0.99004 0.93534 0.87378 1.22824 0.87597 0.95653 0.94420 1.86155 1.44070 1.70621 1.20486 1.18771 0.93489 0.93885 0.82946 1.19716 0.97185 1.04102 0.94668 1.24875 0.93217 0.96392 1.02009 1.86554 1.64949 1.46125 1.36315 0.95112 0.81445 0.79095 0.86147 1.20845 0.98530 0.98245 0.91714 1.21054 0.94835 1.01115 1.00244 1.21031 0.97691 0.95975 0.94443 1.21316 1.00173 1.06702 0.94863 1.23592 0.99609 0.96756 0.98380 0.92120 0.90932 0.89396 0.91416 0.89927 0.91405 0.89433 0.90923 0.92140 0.75891 0.88994 0.89650 0.91696 0.91729 0.87096 0.77893 1.17924 1.18197 0.84857 0.85301 0.85489 0.85360 0.90063 0.89365 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.33 8.37 37.16 0.31 -0.02 16 2 C 0.14 0.23 1.13 -90.62 -0.10 0.13 16 3 C -0.14 0.06 8.85 37.16 0.33 0.39 16 4 C -0.18 -0.31 8.37 37.16 0.31 0.00 16 5 O -0.37 -1.01 9.94 -40.29 -0.40 -1.42 16 6 C 0.65 2.07 8.06 54.06 0.44 2.50 16 7 O -0.57 -3.17 11.48 -19.28 -0.22 -3.39 16 8 N -0.70 -0.09 5.36 -57.93 -0.31 -0.40 16 9 C 0.14 -0.08 4.24 -67.12 -0.28 -0.36 16 10 H 0.12 0.11 7.47 -51.93 -0.39 -0.28 16 11 C -0.14 0.37 7.39 -25.92 -0.19 0.18 16 12 C -0.11 0.15 4.01 -89.80 -0.36 -0.21 16 13 H 0.11 -0.09 8.14 -51.93 -0.42 -0.51 16 14 C 0.07 -0.06 4.58 37.16 0.17 0.11 16 15 O -0.30 -0.65 9.47 -19.43 -0.18 -0.83 16 16 C 0.16 0.30 6.66 -39.21 -0.26 0.04 16 17 C -0.16 -0.21 5.27 -104.47 -0.55 -0.76 16 18 C -0.05 -0.07 2.38 36.00 0.09 0.01 16 19 O -0.53 -1.00 12.88 -35.23 -0.45 -1.45 16 20 Si 0.68 -0.12 29.92 -169.99 -5.09 -5.20 16 21 C -0.08 0.02 8.66 -39.61 -0.34 -0.32 16 22 C -0.15 0.09 10.04 -39.56 -0.40 -0.31 16 23 C -0.07 0.03 10.04 -39.60 -0.40 -0.37 16 24 C -0.21 -0.09 9.04 -39.43 -0.36 -0.45 16 25 C -0.14 0.07 7.43 -25.92 -0.19 -0.13 16 26 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 27 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 28 H 0.09 0.35 5.88 -51.93 -0.31 0.05 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.07 -0.04 8.14 -51.94 -0.42 -0.46 16 32 H 0.09 0.33 5.88 -51.93 -0.31 0.03 16 33 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 34 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 35 H 0.41 -0.84 8.84 -40.82 -0.36 -1.20 16 36 H 0.09 -0.37 8.08 -51.93 -0.42 -0.79 16 37 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 38 H 0.06 -0.11 7.36 -51.93 -0.38 -0.50 16 39 H 0.06 -0.12 7.67 -51.93 -0.40 -0.52 16 40 H 0.11 0.30 7.83 -51.93 -0.41 -0.11 16 41 H 0.37 -0.83 8.70 45.56 0.40 -0.43 16 42 H -0.25 -0.79 7.11 56.52 0.40 -0.39 16 43 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 44 H 0.13 -0.37 5.13 -52.48 -0.27 -0.64 16 45 H 0.13 -0.34 8.06 -52.49 -0.42 -0.76 16 46 H 0.13 -0.29 8.06 -52.49 -0.42 -0.72 16 47 H 0.13 -0.17 6.30 -52.49 -0.33 -0.50 16 48 H 0.08 0.09 8.14 -51.92 -0.42 -0.33 16 49 H 0.09 -0.06 7.90 -51.93 -0.41 -0.47 16 LS Contribution 392.33 15.07 5.91 5.91 Total: 0.00 -7.82 392.33 -10.39 -18.21 By element: Atomic # 1 Polarization: -4.02 SS G_CDS: -7.85 Total: -11.87 kcal Atomic # 6 Polarization: 2.23 SS G_CDS: -1.79 Total: 0.44 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.31 Total: -0.40 kcal Atomic # 8 Polarization: -5.83 SS G_CDS: -1.26 Total: -7.09 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: -5.09 Total: -5.20 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -7.82 -10.39 -18.21 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26800_15734236.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.518 kcal (2) G-P(sol) polarization free energy of solvation -7.823 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.341 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.729 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds