Wall clock time and date at job start Tue Mar 9 2021 16:11:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35995 * 116.99655 * 2 1 4 4 C 1.39153 * 120.06973 * 179.97438 * 3 2 1 5 5 O 1.35997 * 120.07177 * 0.02646 * 4 3 2 6 6 C 1.42902 * 116.99582 * 180.02562 * 5 4 3 7 7 C 1.53004 * 109.46900 * 180.02562 * 6 5 4 8 8 H 1.08992 * 112.84816 * 316.19510 * 7 6 5 9 9 C 1.53783 * 113.61366 * 87.50198 * 7 6 5 10 10 C 1.53786 * 87.07877 * 139.98042 * 9 7 6 11 11 H 1.09005 * 113.61027 * 89.11652 * 10 9 7 12 12 O 1.42902 * 113.68769 * 220.00464 * 10 9 7 13 13 C 1.42900 * 113.99969 * 247.53574 * 12 10 9 14 14 C 1.53004 * 109.47108 * 59.99967 * 13 12 10 15 15 C 1.52999 * 109.47298 * 180.02562 * 13 12 10 16 16 C 1.53006 * 109.47188 * 300.00204 * 13 12 10 17 17 C 1.53780 * 87.08085 * 334.56540 * 10 9 7 18 18 C 1.38563 * 119.85262 * 180.02562 * 4 3 2 19 19 C 1.38242 * 119.99955 * 359.97438 * 18 4 3 20 20 C 1.38247 * 120.14553 * 0.02562 * 19 18 4 21 21 C 1.50707 * 119.92512 * 179.97438 * 20 19 18 22 22 O 1.42904 * 109.46756 * 245.00132 * 21 20 19 23 23 Si 1.86298 * 109.47097 * 5.00025 * 21 20 19 24 24 C 1.38241 * 120.14892 * 359.68038 * 20 19 18 25 25 H 1.09005 * 109.47329 * 179.97438 * 1 2 3 26 26 H 1.08996 * 109.47352 * 299.99794 * 1 2 3 27 27 H 1.08996 * 109.47452 * 60.00247 * 1 2 3 28 28 H 1.09006 * 109.47396 * 299.99616 * 6 5 4 29 29 H 1.08999 * 109.47732 * 60.00088 * 6 5 4 30 30 H 1.08996 * 113.61226 * 254.52641 * 9 7 6 31 31 H 1.08999 * 113.61660 * 25.43121 * 9 7 6 32 32 H 1.09003 * 109.46545 * 60.00293 * 14 13 12 33 33 H 1.09005 * 109.46929 * 179.97438 * 14 13 12 34 34 H 1.08997 * 109.47370 * 299.99877 * 14 13 12 35 35 H 1.09000 * 109.46952 * 59.99758 * 15 13 12 36 36 H 1.08994 * 109.47227 * 179.97438 * 15 13 12 37 37 H 1.08992 * 109.46885 * 300.00089 * 15 13 12 38 38 H 1.09002 * 109.46837 * 60.00040 * 16 13 12 39 39 H 1.09004 * 109.46823 * 179.97438 * 16 13 12 40 40 H 1.09000 * 109.47018 * 300.00215 * 16 13 12 41 41 H 1.08995 * 113.61192 * 270.88080 * 17 10 9 42 42 H 1.09000 * 113.68531 * 139.99287 * 17 10 9 43 43 H 1.08005 * 119.99678 * 179.97438 * 18 4 3 44 44 H 1.08006 * 119.92610 * 180.02562 * 19 18 4 45 45 H 1.08992 * 109.47084 * 125.00485 * 21 20 19 46 46 H 0.96700 * 113.99923 * 59.99946 * 22 21 20 47 47 H 1.48499 * 109.99956 * 180.02562 * 23 21 20 48 48 H 1.48502 * 109.99917 * 301.32142 * 23 21 20 49 49 H 1.07999 * 120.00209 * 180.32115 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2118 0.0000 4 6 3.4359 1.2864 0.0005 5 8 4.1795 0.1477 0.0005 6 6 5.6002 0.3007 0.0017 7 6 6.2618 -1.0789 0.0008 8 1 5.7907 -1.7746 0.6951 9 6 6.4737 -1.6596 -1.4073 10 6 7.8368 -2.1666 -0.9074 11 1 7.7963 -3.1609 -0.4624 12 8 8.8871 -2.0304 -1.8669 13 6 9.3854 -3.2742 -2.3637 14 6 8.2505 -4.0436 -3.0427 15 6 10.5002 -3.0086 -3.3774 16 6 9.9394 -4.1021 -1.2023 17 6 7.7937 -1.0275 0.1247 18 6 4.0602 2.5234 0.0011 19 6 3.3028 3.6799 0.0005 20 6 1.9223 3.6057 0.0000 21 6 1.1015 4.8696 0.0000 22 8 0.3641 4.9586 1.2209 23 14 2.2308 6.3435 -0.1523 24 6 1.2931 2.3748 -0.0067 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 5.9072 0.8509 -0.8879 29 1 5.9059 0.8501 0.8921 30 1 5.7765 -2.4584 -1.6596 31 1 6.5490 -0.9005 -2.1859 32 1 7.8559 -3.4537 -3.8701 33 1 8.6308 -4.9921 -3.4221 34 1 7.4566 -4.2328 -2.3203 35 1 11.3085 -2.4607 -2.8932 36 1 10.8806 -3.9573 -3.7560 37 1 10.1059 -2.4187 -4.2047 38 1 9.1454 -4.2913 -0.4799 39 1 10.3190 -5.0510 -1.5813 40 1 10.7478 -3.5540 -0.7185 41 1 8.2300 -0.0957 -0.2351 42 1 8.1620 -1.3148 1.1095 43 1 5.1385 2.5840 0.0019 44 1 3.7907 4.6435 0.0005 45 1 0.4096 4.8535 -0.8420 46 1 0.9172 4.9775 2.0139 47 1 1.4335 7.5963 -0.1529 48 1 3.1999 6.3592 0.9728 49 1 0.2146 2.3196 -0.0123 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26802_14598384.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:11:42 Heat of formation + Delta-G solvation = -101.209838 kcal Electronic energy + Delta-G solvation = -27689.092383 eV Core-core repulsion = 23777.723594 eV Total energy + Delta-G solvation = -3911.368789 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.186 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.67591 -40.90069 -39.50210 -38.90804 -38.12528 -36.91581 -33.89603 -31.90847 -31.38367 -29.45543 -28.48136 -28.39619 -28.25060 -26.64882 -26.15253 -24.29761 -22.90151 -22.33008 -20.82557 -20.65714 -19.46785 -18.49380 -18.06389 -17.75553 -17.20482 -17.11871 -16.56833 -16.37873 -16.17397 -16.06352 -15.79217 -15.76468 -15.51656 -15.06436 -14.60217 -14.41522 -14.30875 -14.05019 -13.62863 -13.51467 -13.43730 -13.32435 -13.23600 -13.03144 -12.83277 -12.69265 -12.61733 -12.51787 -12.43525 -12.14964 -12.09542 -12.00709 -11.85876 -11.68825 -11.56550 -11.35220 -11.17676 -10.59473 -10.34011 -9.72343 -8.78827 -4.95456 0.24932 0.35339 1.28728 1.59605 1.95968 2.12653 2.32930 2.62715 2.74177 3.36964 3.46207 3.55852 3.64553 3.74280 3.76298 3.84623 3.88328 3.94633 3.96489 4.06871 4.10266 4.15397 4.25395 4.27014 4.27543 4.37842 4.43270 4.51910 4.55742 4.56174 4.61916 4.63387 4.67582 4.74934 4.75714 4.79030 4.81548 4.88304 4.91198 5.01656 5.06362 5.09793 5.15128 5.20374 5.29123 5.31114 5.37278 5.42489 5.63322 6.11233 6.40236 6.41644 6.62109 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.305 6.305 3 C 0.099 3.901 4 C 0.111 3.889 5 O -0.300 6.300 6 C 0.070 3.930 7 C -0.109 4.109 8 H 0.104 0.896 9 C -0.147 4.147 10 C 0.062 3.938 11 H 0.092 0.908 12 O -0.361 6.361 13 C 0.105 3.895 14 C -0.176 4.176 15 C -0.139 4.139 16 C -0.179 4.179 17 C -0.127 4.127 18 C -0.170 4.170 19 C -0.114 4.114 20 C -0.117 4.117 21 C -0.072 4.072 22 O -0.531 6.531 23 Si 0.687 3.313 24 C -0.146 4.146 25 H 0.102 0.898 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.066 0.934 29 H 0.064 0.936 30 H 0.072 0.928 31 H 0.091 0.909 32 H 0.064 0.936 33 H 0.065 0.935 34 H 0.058 0.942 35 H 0.063 0.937 36 H 0.070 0.930 37 H 0.063 0.937 38 H 0.059 0.941 39 H 0.067 0.933 40 H 0.065 0.935 41 H 0.094 0.906 42 H 0.077 0.923 43 H 0.139 0.861 44 H 0.131 0.869 45 H 0.117 0.883 46 H 0.376 0.624 47 H -0.258 1.258 48 H -0.260 1.260 49 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.006 -1.193 -1.224 2.635 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.218 6.218 3 C 0.054 3.946 4 C 0.065 3.935 5 O -0.214 6.214 6 C -0.005 4.005 7 C -0.127 4.127 8 H 0.122 0.878 9 C -0.184 4.184 10 C 0.004 3.996 11 H 0.110 0.890 12 O -0.281 6.281 13 C 0.066 3.934 14 C -0.234 4.234 15 C -0.196 4.196 16 C -0.237 4.237 17 C -0.164 4.164 18 C -0.189 4.189 19 C -0.131 4.131 20 C -0.118 4.118 21 C -0.182 4.182 22 O -0.337 6.337 23 Si 0.589 3.411 24 C -0.165 4.165 25 H 0.120 0.880 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.085 0.915 29 H 0.083 0.917 30 H 0.091 0.909 31 H 0.109 0.891 32 H 0.083 0.917 33 H 0.084 0.916 34 H 0.077 0.923 35 H 0.082 0.918 36 H 0.089 0.911 37 H 0.083 0.917 38 H 0.078 0.922 39 H 0.086 0.914 40 H 0.084 0.916 41 H 0.112 0.888 42 H 0.096 0.904 43 H 0.157 0.843 44 H 0.149 0.851 45 H 0.135 0.865 46 H 0.224 0.776 47 H -0.183 1.183 48 H -0.185 1.185 49 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.887 -0.684 -1.334 2.410 hybrid contribution -0.500 -0.363 1.249 1.393 sum 1.387 -1.047 -0.085 1.740 Atomic orbital electron populations 1.23107 0.78243 1.04239 1.01393 1.86193 1.21233 1.25587 1.88823 1.18297 0.89176 0.85390 1.01772 1.18268 0.88227 0.86200 1.00835 1.86187 1.18561 1.28119 1.88527 1.22845 0.78154 0.97950 1.01550 1.22300 0.95160 0.96058 0.99208 0.87788 1.23608 0.96830 1.01464 0.96545 1.23574 0.87217 0.98614 0.90202 0.89035 1.88030 1.52458 1.29058 1.58533 1.21539 0.93781 0.84510 0.93591 1.22472 0.98603 1.00807 1.01513 1.21767 0.97214 1.02398 0.98229 1.22475 1.01784 1.00717 0.98684 1.23229 0.93867 1.00035 0.99297 1.21025 1.00571 0.90759 1.06512 1.20747 0.92895 0.98055 1.01448 1.19938 0.93650 0.95058 1.03109 1.24990 1.01609 1.01772 0.89783 1.86594 1.36207 1.95511 1.15391 0.94907 0.79595 0.76410 0.90234 1.20919 1.00247 0.90512 1.04799 0.87994 0.92582 0.92560 0.91539 0.91743 0.90920 0.89076 0.91651 0.91551 0.92259 0.91775 0.91078 0.91748 0.92227 0.91363 0.91610 0.88796 0.90438 0.84348 0.85141 0.86499 0.77636 1.18273 1.18486 0.84387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 9.81 101.05 0.99 0.99 16 2 O -0.30 -1.11 10.28 -34.23 -0.35 -1.46 16 3 C 0.10 0.33 6.70 -39.12 -0.26 0.06 16 4 C 0.11 0.33 6.70 -39.12 -0.26 0.07 16 5 O -0.30 -0.96 9.92 -34.24 -0.34 -1.30 16 6 C 0.07 0.01 4.58 37.16 0.17 0.18 16 7 C -0.11 0.04 4.01 -89.80 -0.36 -0.32 16 8 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 9 C -0.15 -0.03 7.47 -25.92 -0.19 -0.22 16 10 C 0.06 0.00 2.82 -25.92 -0.07 -0.07 16 11 H 0.09 -0.06 5.54 -51.93 -0.29 -0.35 16 12 O -0.36 -0.62 10.00 -35.23 -0.35 -0.97 16 13 C 0.10 0.03 1.11 -90.61 -0.10 -0.07 16 14 C -0.18 0.06 8.39 37.16 0.31 0.37 16 15 C -0.14 0.04 8.84 37.16 0.33 0.36 16 16 C -0.18 0.11 8.38 37.16 0.31 0.42 16 17 C -0.13 0.10 7.47 -25.92 -0.19 -0.09 16 18 C -0.17 -0.15 9.04 -39.46 -0.36 -0.51 16 19 C -0.11 -0.04 8.66 -39.58 -0.34 -0.38 16 20 C -0.12 -0.10 5.35 -104.61 -0.56 -0.66 16 21 C -0.07 -0.01 2.80 36.01 0.10 0.09 16 22 O -0.53 -0.78 12.84 -35.23 -0.45 -1.24 16 23 Si 0.69 -0.52 29.88 -169.99 -5.08 -5.60 16 24 C -0.15 -0.26 8.68 -39.46 -0.34 -0.60 16 25 H 0.10 -0.17 8.14 -51.93 -0.42 -0.60 16 26 H 0.06 -0.05 7.68 -51.93 -0.40 -0.45 16 27 H 0.06 -0.06 7.65 -51.93 -0.40 -0.46 16 28 H 0.07 -0.05 7.36 -51.93 -0.38 -0.43 16 29 H 0.06 -0.06 7.66 -51.93 -0.40 -0.46 16 30 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.09 0.07 7.89 -51.93 -0.41 -0.34 16 32 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 34 H 0.06 -0.02 7.02 -51.93 -0.36 -0.39 16 35 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 36 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 38 H 0.06 -0.05 6.24 -51.93 -0.32 -0.38 16 39 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 40 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 41 H 0.09 -0.07 8.10 -51.93 -0.42 -0.49 16 42 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 43 H 0.14 -0.17 6.30 -52.48 -0.33 -0.50 16 44 H 0.13 -0.20 4.83 -52.48 -0.25 -0.45 16 45 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 46 H 0.38 -0.46 8.70 45.56 0.40 -0.06 16 47 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 48 H -0.26 -0.27 7.01 56.52 0.40 0.13 16 49 H 0.14 0.09 6.30 -52.49 -0.33 -0.24 16 LS Contribution 386.63 15.07 5.83 5.83 Total: 0.00 -6.17 386.63 -9.75 -15.91 By element: Atomic # 1 Polarization: -2.60 SS G_CDS: -8.17 Total: -10.77 kcal Atomic # 6 Polarization: 0.43 SS G_CDS: -0.83 Total: -0.40 kcal Atomic # 8 Polarization: -3.47 SS G_CDS: -1.50 Total: -4.97 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: -5.08 Total: -5.60 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -6.17 -9.75 -15.91 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26802_14598384.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.295 kcal (2) G-P(sol) polarization free energy of solvation -6.165 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.460 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.915 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.210 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds