Wall clock time and date at job start Tue Mar 9 2021 16:42:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52995 * 109.47491 * 2 1 4 4 C 1.53002 * 109.46774 * 240.00260 * 2 1 3 5 5 O 1.42899 * 109.47121 * 120.00557 * 2 1 3 6 6 C 1.42897 * 114.00083 * 59.99730 * 5 2 1 7 7 H 1.08999 * 112.90793 * 341.25336 * 6 5 2 8 8 C 1.53781 * 113.61595 * 112.50279 * 6 5 2 9 9 C 1.54049 * 87.08031 * 139.97562 * 8 6 5 10 10 H 1.09000 * 113.61076 * 89.06984 * 9 8 6 11 11 C 1.52990 * 113.70090 * 220.05426 * 9 8 6 12 12 O 1.42903 * 109.47168 * 272.42623 * 11 9 8 13 13 C 1.35917 * 117.00359 * 180.02562 * 12 11 9 14 14 C 1.38695 * 120.04650 * 179.72285 * 13 12 11 15 15 C 1.50699 * 120.02668 * 359.97438 * 14 13 12 16 16 O 1.42893 * 109.47375 * 74.99643 * 15 14 13 17 17 Si 1.86303 * 109.47110 * 195.00047 * 15 14 13 18 18 C 1.38167 * 119.95098 * 179.73927 * 14 13 12 19 19 C 1.38326 * 120.04665 * 0.53378 * 18 14 13 20 20 Br 1.89097 * 119.95201 * 179.74534 * 19 18 14 21 21 C 1.38361 * 120.08761 * 359.71917 * 19 18 14 22 22 C 1.38116 * 120.04975 * 0.02562 * 21 19 18 23 23 C 1.53781 * 113.61404 * 210.00015 * 6 5 2 24 24 H 1.09005 * 109.46889 * 299.99661 * 1 2 3 25 25 H 1.09006 * 109.47235 * 59.99148 * 1 2 3 26 26 H 1.08996 * 109.47816 * 179.97438 * 1 2 3 27 27 H 1.08992 * 109.47372 * 180.02562 * 3 2 1 28 28 H 1.08998 * 109.47323 * 300.00528 * 3 2 1 29 29 H 1.09005 * 109.46777 * 60.00271 * 3 2 1 30 30 H 1.09002 * 109.47440 * 300.00009 * 4 2 1 31 31 H 1.09000 * 109.47397 * 60.00443 * 4 2 1 32 32 H 1.09000 * 109.47214 * 179.97438 * 4 2 1 33 33 H 1.09005 * 113.61471 * 254.53145 * 8 6 5 34 34 H 1.08996 * 113.61178 * 25.34487 * 8 6 5 35 35 H 1.09007 * 109.47036 * 32.41747 * 11 9 8 36 36 H 1.08994 * 109.47734 * 152.42153 * 11 9 8 37 37 H 1.09004 * 109.46456 * 314.99603 * 15 14 13 38 38 H 0.96700 * 114.00033 * 180.02562 * 16 15 14 39 39 H 1.48504 * 109.99652 * 178.67889 * 17 15 14 40 40 H 1.48491 * 109.99993 * 299.99317 * 17 15 14 41 41 H 1.08002 * 119.97469 * 180.25173 * 18 14 13 42 42 H 1.08000 * 119.97158 * 180.02562 * 21 19 18 43 43 H 1.08004 * 120.02502 * 179.97438 * 22 21 19 44 44 H 1.09002 * 113.61445 * 334.56823 * 23 6 5 45 45 H 1.09002 * 113.61408 * 105.38554 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0063 -0.6737 1.1667 6 6 1.5846 -2.0356 1.2643 7 1 0.7241 -2.2595 0.6339 8 6 2.7333 -3.0480 1.1210 9 6 2.0549 -3.8572 2.2427 10 1 1.3227 -4.5782 1.8793 11 6 3.0388 -4.4619 3.2461 12 8 3.4721 -5.7403 2.7770 13 6 4.3551 -6.4173 3.5577 14 6 4.8129 -7.6664 3.1657 15 6 4.3314 -8.2748 1.8738 16 8 4.9707 -7.6247 0.7736 17 14 4.7476 -10.0906 1.8493 18 6 5.7146 -8.3505 3.9581 19 6 6.1523 -7.7953 5.1471 20 35 7.3809 -8.7371 6.2331 21 6 5.6927 -6.5516 5.5424 22 6 4.7953 -5.8621 4.7506 23 6 1.4332 -2.5313 2.7122 24 1 -0.3633 0.5138 0.8901 25 1 -0.3634 0.5140 -0.8900 26 1 -0.3634 -1.0276 -0.0005 27 1 3.1300 1.4424 -0.0005 28 1 1.6767 1.9563 -0.8899 29 1 1.6767 1.9562 0.8901 30 1 1.6765 -1.7489 -1.2494 31 1 1.6766 -0.2073 -2.1393 32 1 3.1299 -0.7209 -1.2496 33 1 2.7461 -3.5605 0.1591 34 1 3.7072 -2.6454 1.3991 35 1 3.9006 -3.8028 3.3523 36 1 2.5479 -4.5767 4.2124 37 1 3.2517 -8.1485 1.7931 38 1 4.7072 -7.9658 -0.0920 39 1 4.2497 -10.7089 0.5943 40 1 6.2168 -10.2763 1.9588 41 1 6.0745 -9.3215 3.6512 42 1 6.0359 -6.1197 6.4709 43 1 4.4365 -4.8915 5.0599 44 1 2.0515 -1.9879 3.4266 45 1 0.3964 -2.6254 3.0353 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26869_14598384.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:42:12 Heat of formation + Delta-G solvation = -62.693132 kcal Electronic energy + Delta-G solvation = -25769.546784 eV Core-core repulsion = 21994.250013 eV Total energy + Delta-G solvation = -3775.296771 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.082 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.59218 -40.82242 -39.05244 -37.94940 -37.65076 -33.95542 -33.20964 -32.60137 -30.26531 -29.09246 -28.43276 -28.29481 -26.81683 -26.66000 -24.48139 -22.80978 -22.35513 -20.86467 -20.65374 -19.23186 -18.51686 -17.92186 -17.42405 -17.02171 -16.77979 -16.58678 -16.00945 -15.78762 -15.71430 -15.35416 -15.09457 -14.65869 -14.52373 -14.35543 -14.04330 -13.87187 -13.51641 -13.45983 -13.37773 -13.16468 -13.03699 -12.86751 -12.84560 -12.72822 -12.70272 -12.29905 -12.13232 -11.86104 -11.80349 -11.72481 -11.49425 -11.30703 -11.19645 -11.14815 -10.42508 -10.38237 -10.14501 -9.15318 -4.98195 0.06347 0.11389 0.70374 1.25860 1.56513 1.91975 2.00877 2.41064 2.69873 3.31498 3.38086 3.49194 3.64088 3.67499 3.70659 3.76092 3.84887 3.92260 4.00199 4.04066 4.05389 4.06930 4.16840 4.24324 4.34443 4.43519 4.45379 4.52349 4.60412 4.68282 4.69539 4.71964 4.73916 4.77537 4.84951 4.87936 4.94718 4.97637 5.05959 5.07132 5.10644 5.14663 5.25300 5.27079 5.32473 5.47056 6.26252 6.37897 6.49412 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.176 4.176 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.092 0.908 8 C -0.147 4.147 9 C -0.108 4.108 10 H 0.104 0.896 11 C 0.068 3.932 12 O -0.298 6.298 13 C 0.174 3.826 14 C -0.103 4.103 15 C -0.061 4.061 16 O -0.530 6.530 17 Si 0.678 3.322 18 C -0.050 4.050 19 C -0.127 4.127 20 Br -0.045 7.045 21 C -0.041 4.041 22 C -0.206 4.206 23 C -0.127 4.127 24 H 0.065 0.935 25 H 0.068 0.932 26 H 0.059 0.941 27 H 0.063 0.937 28 H 0.071 0.929 29 H 0.063 0.937 30 H 0.058 0.942 31 H 0.066 0.934 32 H 0.064 0.936 33 H 0.072 0.928 34 H 0.090 0.910 35 H 0.068 0.932 36 H 0.068 0.932 37 H 0.078 0.922 38 H 0.378 0.622 39 H -0.257 1.257 40 H -0.251 1.251 41 H 0.143 0.857 42 H 0.139 0.861 43 H 0.140 0.860 44 H 0.094 0.906 45 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.405 0.834 -0.228 4.489 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.281 6.281 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.184 4.184 9 C -0.127 4.127 10 H 0.122 0.878 11 C -0.007 4.007 12 O -0.210 6.210 13 C 0.127 3.873 14 C -0.104 4.104 15 C -0.170 4.170 16 O -0.337 6.337 17 Si 0.579 3.421 18 C -0.069 4.069 19 C -0.207 4.207 20 Br 0.040 6.960 21 C -0.061 4.061 22 C -0.225 4.225 23 C -0.164 4.164 24 H 0.084 0.916 25 H 0.087 0.913 26 H 0.078 0.922 27 H 0.082 0.918 28 H 0.089 0.911 29 H 0.083 0.917 30 H 0.077 0.923 31 H 0.085 0.915 32 H 0.083 0.917 33 H 0.090 0.910 34 H 0.109 0.891 35 H 0.086 0.914 36 H 0.086 0.914 37 H 0.096 0.904 38 H 0.226 0.774 39 H -0.182 1.182 40 H -0.176 1.176 41 H 0.160 0.840 42 H 0.157 0.843 43 H 0.158 0.842 44 H 0.112 0.888 45 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -3.218 0.228 0.193 3.232 hybrid contribution -0.356 0.784 -1.337 1.590 sum -3.574 1.012 -1.144 3.887 Atomic orbital electron populations 1.22471 0.95636 1.02439 1.03094 1.21538 0.93100 0.93255 0.85518 1.21769 1.02040 0.93205 1.02617 1.22471 1.02345 1.00754 0.97820 1.88034 1.73753 1.23362 1.42909 1.23562 0.97061 0.81886 0.97095 0.89011 1.23652 0.99373 0.96372 0.99022 1.22341 0.97923 0.95792 0.96630 0.87776 1.22903 0.97575 0.82404 0.97775 1.86144 1.56876 1.31703 1.46304 1.18825 0.88715 0.90640 0.89143 1.18512 1.01214 0.93876 0.96826 1.24547 0.99447 1.07420 0.85627 1.86616 1.69346 1.61593 1.16163 0.95151 0.83173 0.75881 0.87942 1.20903 0.93951 0.99706 0.92335 1.21543 1.03347 0.97908 0.97897 1.96763 1.57561 1.74969 1.66708 1.20966 0.94030 0.92020 0.99060 1.21299 1.03104 1.02385 0.95753 1.23228 1.01828 0.94204 0.97150 0.91587 0.91343 0.92239 0.91756 0.91053 0.91748 0.92296 0.91527 0.91664 0.90952 0.89117 0.91408 0.91395 0.90374 0.77428 1.18200 1.17602 0.83986 0.84335 0.84246 0.88790 0.90363 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.15 8.38 37.16 0.31 0.46 16 2 C 0.10 0.01 1.11 -90.62 -0.10 -0.09 16 3 C -0.14 0.04 8.84 37.15 0.33 0.37 16 4 C -0.18 0.08 8.38 37.16 0.31 0.39 16 5 O -0.36 -0.56 10.00 -35.23 -0.35 -0.91 16 6 C 0.06 -0.02 2.82 -25.92 -0.07 -0.09 16 7 H 0.09 -0.10 5.55 -51.93 -0.29 -0.39 16 8 C -0.15 0.02 7.47 -25.78 -0.19 -0.17 16 9 C -0.11 0.12 4.02 -89.67 -0.36 -0.24 16 10 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 11 C 0.07 -0.05 4.58 37.15 0.17 0.12 16 12 O -0.30 -0.52 9.47 -19.48 -0.18 -0.70 16 13 C 0.17 0.35 6.66 -39.22 -0.26 0.09 16 14 C -0.10 -0.22 5.30 -104.48 -0.55 -0.78 16 15 C -0.06 -0.06 2.37 36.01 0.09 0.03 16 16 O -0.53 -1.15 12.86 -35.23 -0.45 -1.61 16 17 Si 0.68 -0.17 30.21 -169.99 -5.14 -5.30 16 18 C -0.05 -0.09 8.39 -39.58 -0.33 -0.42 16 19 C -0.13 -0.23 6.22 -39.50 -0.25 -0.47 16 20 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.37 16 21 C -0.04 -0.03 9.78 -39.58 -0.39 -0.42 16 22 C -0.21 -0.14 9.04 -39.44 -0.36 -0.49 16 23 C -0.13 0.17 7.46 -25.92 -0.19 -0.03 16 24 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 26 H 0.06 -0.07 6.25 -51.93 -0.32 -0.40 16 27 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 29 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 30 H 0.06 -0.04 7.02 -51.93 -0.36 -0.40 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.09 0.07 7.91 -51.93 -0.41 -0.34 16 35 H 0.07 -0.06 7.38 -51.93 -0.38 -0.44 16 36 H 0.07 -0.13 7.66 -51.93 -0.40 -0.53 16 37 H 0.08 -0.01 7.83 -51.93 -0.41 -0.41 16 38 H 0.38 -0.69 8.74 45.56 0.40 -0.29 16 39 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 40 H -0.25 -0.62 6.74 56.52 0.38 -0.23 16 41 H 0.14 0.14 4.90 -52.49 -0.26 -0.12 16 42 H 0.14 -0.13 8.06 -52.49 -0.42 -0.55 16 43 H 0.14 -0.20 6.30 -52.48 -0.33 -0.53 16 44 H 0.09 -0.10 8.10 -51.93 -0.42 -0.52 16 45 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 LS Contribution 378.02 15.07 5.70 5.70 Total: 0.00 -5.25 378.02 -11.62 -16.88 By element: Atomic # 1 Polarization: -2.90 SS G_CDS: -7.05 Total: -9.95 kcal Atomic # 6 Polarization: 0.12 SS G_CDS: -1.85 Total: -1.73 kcal Atomic # 8 Polarization: -2.23 SS G_CDS: -0.99 Total: -3.22 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.14 Total: -5.30 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.37 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -5.25 -11.62 -16.88 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26869_14598384.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.816 kcal (2) G-P(sol) polarization free energy of solvation -5.253 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.069 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.624 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.877 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.693 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds