Wall clock time and date at job start Tue Mar 9 2021 16:42:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53001 * 109.46657 * 2 1 4 4 C 1.52998 * 109.47153 * 240.00430 * 2 1 3 5 5 O 1.45196 * 109.47398 * 119.99761 * 2 1 3 6 6 C 1.34638 * 116.99780 * 60.00281 * 5 2 1 7 7 O 1.21502 * 120.00224 * 359.97438 * 6 5 2 8 8 N 1.34784 * 119.99743 * 179.97438 * 6 5 2 9 9 C 1.46495 * 119.99784 * 179.97438 * 8 6 5 10 10 H 1.09003 * 112.85272 * 336.19823 * 9 8 6 11 11 C 1.53954 * 113.61304 * 107.46887 * 9 8 6 12 12 C 1.53779 * 87.01935 * 89.19831 * 11 9 8 13 13 H 1.08996 * 113.61471 * 270.77258 * 12 11 9 14 14 C 1.53003 * 113.61332 * 139.95226 * 12 11 9 15 15 O 1.42896 * 109.47299 * 85.86318 * 14 12 11 16 16 C 1.35915 * 117.00188 * 179.97438 * 15 14 12 17 17 C 1.38709 * 120.04611 * 180.27994 * 16 15 14 18 18 C 1.50702 * 120.02091 * 0.02562 * 17 16 15 19 19 O 1.42903 * 109.46889 * 285.29811 * 18 17 16 20 20 Si 1.86305 * 109.46739 * 165.30493 * 18 17 16 21 21 C 1.38159 * 119.95351 * 180.32311 * 17 16 15 22 22 C 1.38329 * 120.04454 * 359.41898 * 21 17 16 23 23 Br 1.89097 * 119.95323 * 180.27903 * 22 21 17 24 24 C 1.38361 * 120.09165 * 0.25877 * 22 21 17 25 25 C 1.38123 * 120.04445 * 0.04330 * 24 22 21 26 26 C 1.53774 * 113.61630 * 205.00308 * 9 8 6 27 27 H 1.09003 * 109.47080 * 299.99455 * 1 2 3 28 28 H 1.08991 * 109.47545 * 59.99864 * 1 2 3 29 29 H 1.09000 * 109.46761 * 180.02562 * 1 2 3 30 30 H 1.09009 * 109.47043 * 180.02562 * 3 2 1 31 31 H 1.09004 * 109.47194 * 300.00030 * 3 2 1 32 32 H 1.09002 * 109.47411 * 60.00229 * 3 2 1 33 33 H 1.09000 * 109.46862 * 299.99417 * 4 2 1 34 34 H 1.08996 * 109.47515 * 59.99213 * 4 2 1 35 35 H 1.08998 * 109.47201 * 179.97438 * 4 2 1 36 36 H 0.97000 * 119.99879 * 0.02562 * 8 6 5 37 37 H 1.08998 * 113.66725 * 334.67029 * 11 9 8 38 38 H 1.09006 * 113.61324 * 203.72146 * 11 9 8 39 39 H 1.09003 * 109.47369 * 325.86096 * 14 12 11 40 40 H 1.08998 * 109.46998 * 205.86593 * 14 12 11 41 41 H 1.08995 * 109.47201 * 45.30270 * 18 17 16 42 42 H 0.96696 * 114.00240 * 60.00798 * 19 18 17 43 43 H 1.48497 * 109.99856 * 299.99515 * 20 18 17 44 44 H 1.48496 * 110.00364 * 61.31803 * 20 18 17 45 45 H 1.08002 * 119.98071 * 179.70455 * 21 17 16 46 46 H 1.07996 * 119.98160 * 180.02562 * 24 22 21 47 47 H 1.07998 * 120.01891 * 179.97438 * 25 24 22 48 48 H 1.08999 * 113.61667 * 156.25406 * 26 9 8 49 49 H 1.08999 * 113.61656 * 25.34816 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7211 -1.2493 5 8 2.0141 -0.6844 1.1855 6 6 1.6524 -1.9722 1.3383 7 8 0.9511 -2.5094 0.5041 8 7 2.0683 -2.6656 2.4167 9 6 1.6743 -4.0667 2.5832 10 1 0.7594 -4.3160 2.0455 11 6 2.8231 -5.0631 2.3432 12 6 3.1499 -4.9231 3.8393 13 1 3.8479 -4.1156 4.0601 14 6 3.5380 -6.2434 4.5080 15 8 4.9366 -6.4751 4.3288 16 6 5.4474 -7.6139 4.8669 17 6 6.7986 -7.8987 4.7356 18 6 7.7018 -6.9454 3.9965 19 8 7.4694 -7.0617 2.5913 20 14 9.4797 -7.3600 4.3683 21 6 7.3146 -9.0601 5.2776 22 6 6.4870 -9.9327 5.9612 23 35 7.1974 -11.5176 6.7088 24 6 5.1402 -9.6471 6.0991 25 6 4.6192 -8.4901 5.5533 26 6 1.6758 -4.5373 4.0472 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 3.1300 1.4426 -0.0005 31 1 1.6765 1.9564 -0.8900 32 1 1.6766 1.9564 0.8900 33 1 1.6768 -1.7488 -1.2493 34 1 1.6766 -0.2074 -2.1392 35 1 3.1300 -0.7208 -1.2495 36 1 2.6279 -2.2367 3.0828 37 1 3.6051 -4.6797 1.6877 38 1 2.4846 -6.0603 2.0616 39 1 2.9738 -7.0593 4.0562 40 1 3.3119 -6.1915 5.5730 41 1 7.4923 -5.9246 4.3162 42 1 6.5622 -6.8598 2.3246 43 1 9.7343 -7.2428 5.8265 44 1 9.7868 -8.7381 3.9082 45 1 8.3656 -9.2847 5.1716 46 1 4.4958 -10.3293 6.6335 47 1 3.5678 -8.2678 5.6608 48 1 1.0231 -5.3904 4.2323 49 1 1.5330 -3.7300 4.7655 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_26869_15734082.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:42:14 Heat of formation + Delta-G solvation = -92.147171 kcal Electronic energy + Delta-G solvation = -31247.355215 eV Core-core repulsion = 26802.909358 eV Total energy + Delta-G solvation = -4444.445857 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.092 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.00405 -41.67106 -40.42214 -38.78199 -37.81787 -37.62182 -35.37787 -34.14768 -33.22382 -32.76761 -30.35137 -29.06801 -28.38186 -28.31228 -26.89809 -26.71746 -25.07274 -23.74117 -22.77433 -22.55485 -21.17995 -20.29783 -19.49318 -19.28568 -18.38118 -17.75204 -17.55244 -17.24518 -17.09680 -16.74602 -16.49185 -16.21999 -15.82388 -15.61336 -15.42014 -15.41597 -15.10762 -14.89695 -14.54753 -14.43510 -14.00961 -13.88471 -13.69603 -13.40356 -13.36079 -13.14755 -13.02955 -12.93468 -12.88278 -12.87399 -12.60750 -12.41254 -12.33593 -12.32054 -11.92223 -11.69582 -11.55259 -11.52994 -11.41020 -11.28349 -11.17551 -11.13294 -11.08738 -10.31331 -10.19672 -9.35116 -4.89959 -0.12182 -0.11072 0.47386 1.12024 1.29559 1.57299 1.70819 1.87920 1.92597 2.25994 3.09761 3.32751 3.39593 3.44891 3.48701 3.72755 3.75919 3.78380 3.80003 3.81893 3.85665 3.93124 3.96134 4.12653 4.22793 4.31268 4.39317 4.42337 4.47252 4.51073 4.60045 4.60618 4.73789 4.75317 4.75636 4.80089 4.82110 4.86522 4.88802 4.90795 4.95574 4.99070 5.04369 5.07156 5.16314 5.25757 5.28869 5.31650 5.47361 5.60663 6.15024 6.36017 6.57688 7.31578 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.645 3.355 7 O -0.593 6.593 8 N -0.684 5.684 9 C 0.127 3.873 10 H 0.094 0.906 11 C -0.145 4.145 12 C -0.101 4.101 13 H 0.103 0.897 14 C 0.059 3.941 15 O -0.312 6.312 16 C 0.161 3.839 17 C -0.156 4.156 18 C -0.075 4.075 19 O -0.545 6.545 20 Si 0.798 3.202 21 C -0.073 4.073 22 C -0.138 4.138 23 Br -0.052 7.052 24 C -0.046 4.046 25 C -0.194 4.194 26 C -0.119 4.119 27 H 0.062 0.938 28 H 0.086 0.914 29 H 0.064 0.936 30 H 0.069 0.931 31 H 0.098 0.902 32 H 0.070 0.930 33 H 0.063 0.937 34 H 0.086 0.914 35 H 0.061 0.939 36 H 0.417 0.583 37 H 0.063 0.937 38 H 0.102 0.898 39 H 0.083 0.917 40 H 0.083 0.917 41 H 0.090 0.910 42 H 0.374 0.626 43 H -0.266 1.266 44 H -0.288 1.288 45 H 0.127 0.873 46 H 0.158 0.842 47 H 0.171 0.829 48 H 0.120 0.880 49 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.692 4.662 2.240 5.831 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.399 3.601 7 O -0.484 6.484 8 N -0.343 5.343 9 C 0.023 3.977 10 H 0.112 0.888 11 C -0.184 4.184 12 C -0.120 4.120 13 H 0.122 0.878 14 C -0.015 4.015 15 O -0.225 6.225 16 C 0.113 3.887 17 C -0.158 4.158 18 C -0.183 4.183 19 O -0.351 6.351 20 Si 0.700 3.300 21 C -0.093 4.093 22 C -0.218 4.218 23 Br 0.034 6.966 24 C -0.065 4.065 25 C -0.213 4.213 26 C -0.156 4.156 27 H 0.081 0.919 28 H 0.105 0.895 29 H 0.082 0.918 30 H 0.088 0.912 31 H 0.117 0.883 32 H 0.089 0.911 33 H 0.082 0.918 34 H 0.105 0.895 35 H 0.080 0.920 36 H 0.254 0.746 37 H 0.082 0.918 38 H 0.121 0.879 39 H 0.101 0.899 40 H 0.101 0.899 41 H 0.108 0.892 42 H 0.223 0.777 43 H -0.191 1.191 44 H -0.216 1.216 45 H 0.144 0.856 46 H 0.175 0.825 47 H 0.188 0.812 48 H 0.138 0.862 49 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -1.541 3.382 2.372 4.409 hybrid contribution -1.601 -0.155 0.331 1.642 sum -3.141 3.227 2.703 5.252 Atomic orbital electron populations 1.22474 0.93989 1.03711 1.03536 1.22349 0.94481 0.92560 0.81461 1.21897 1.02467 0.90880 1.04264 1.22472 1.01628 1.02246 0.97391 1.86310 1.71520 1.23298 1.47283 1.18332 0.78567 0.80717 0.82481 1.90906 1.42251 1.71043 1.44160 1.44374 1.54913 1.11907 1.23115 1.21902 0.98659 0.78130 0.99005 0.88798 1.23590 0.98102 1.00204 0.96482 1.22590 0.97541 0.96475 0.95344 0.87847 1.23212 0.77775 0.98411 1.02093 1.86064 1.27604 1.36758 1.72058 1.18878 0.91646 0.86329 0.91798 1.19810 0.93309 0.97668 1.04986 1.25209 1.10520 0.99670 0.82936 1.86693 1.35130 1.92851 1.20445 0.92493 0.77260 0.81437 0.78841 1.20863 0.99349 0.92908 0.96135 1.21746 0.96755 0.96029 1.07270 1.96753 1.85949 1.30956 1.82982 1.21248 0.92499 0.96715 0.96056 1.21622 1.01867 0.95381 1.02457 1.23324 0.94959 1.02860 0.94505 0.91884 0.89505 0.91753 0.91190 0.88342 0.91125 0.91788 0.89497 0.91978 0.74641 0.91841 0.87941 0.89934 0.89851 0.89213 0.77720 1.19138 1.21561 0.85553 0.82462 0.81179 0.86218 0.88963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.45 8.37 71.98 0.60 0.16 16 2 C 0.13 0.29 1.13 -10.79 -0.01 0.28 16 3 C -0.14 0.36 8.85 71.98 0.64 1.00 16 4 C -0.18 -0.51 8.37 71.98 0.60 0.09 16 5 O -0.37 -1.67 9.94 -55.47 -0.55 -2.22 16 6 C 0.65 3.47 8.06 129.79 1.05 4.51 16 7 O -0.59 -6.45 11.48 19.83 0.23 -6.22 16 8 N -0.68 1.14 5.27 -567.34 -2.99 -1.85 16 9 C 0.13 -0.54 4.33 45.58 0.20 -0.35 16 10 H 0.09 -0.04 7.46 -2.39 -0.02 -0.06 16 11 C -0.15 0.82 7.44 31.18 0.23 1.05 16 12 C -0.10 0.92 3.88 -10.27 -0.04 0.88 16 13 H 0.10 -0.88 8.14 -2.39 -0.02 -0.90 16 14 C 0.06 -0.52 4.57 71.98 0.33 -0.19 16 15 O -0.31 0.88 9.02 -92.59 -0.83 0.05 16 16 C 0.16 0.05 6.61 22.50 0.15 0.20 16 17 C -0.16 -0.62 5.28 -19.77 -0.10 -0.73 16 18 C -0.07 -0.17 2.33 71.24 0.17 -0.01 16 19 O -0.54 -2.07 12.65 -148.98 -1.89 -3.95 16 20 Si 0.80 1.52 30.40 68.60 2.09 3.61 16 21 C -0.07 -0.46 8.39 22.27 0.19 -0.27 16 22 C -0.14 -0.64 6.22 22.32 0.14 -0.50 16 23 Br -0.05 -0.26 33.70 -20.37 -0.69 -0.95 16 24 C -0.05 0.00 9.78 22.27 0.22 0.21 16 25 C -0.19 0.48 9.04 22.36 0.20 0.68 16 26 C -0.12 1.24 7.39 31.12 0.23 1.47 16 27 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 28 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 29 H 0.06 0.49 5.88 -2.39 -0.01 0.48 16 30 H 0.07 -0.19 8.14 -2.38 -0.02 -0.21 16 31 H 0.10 -0.57 8.14 -2.38 -0.02 -0.59 16 32 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 33 H 0.06 0.52 5.88 -2.39 -0.01 0.50 16 34 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 35 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 36 H 0.42 -2.49 8.81 -92.71 -0.82 -3.30 16 37 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 38 H 0.10 -0.70 7.92 -2.38 -0.02 -0.72 16 39 H 0.08 -0.89 7.40 -2.39 -0.02 -0.91 16 40 H 0.08 -0.92 7.66 -2.39 -0.02 -0.94 16 41 H 0.09 -0.03 7.84 -2.39 -0.02 -0.05 16 42 H 0.37 -0.12 8.57 -74.06 -0.63 -0.75 16 43 H -0.27 -1.26 7.11 99.48 0.71 -0.55 16 44 H -0.29 -2.34 6.81 99.48 0.68 -1.66 16 45 H 0.13 0.94 4.94 -2.91 -0.01 0.92 16 46 H 0.16 -0.62 8.06 -2.91 -0.02 -0.65 16 47 H 0.17 -1.52 6.30 -2.91 -0.02 -1.54 16 48 H 0.12 -1.59 8.10 -2.39 -0.02 -1.61 16 49 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 Total: 0.00 -16.66 412.64 -0.31 -16.97 By element: Atomic # 1 Polarization: -13.47 SS G_CDS: -0.46 Total: -13.93 kcal Atomic # 6 Polarization: 3.71 SS G_CDS: 4.78 Total: 8.49 kcal Atomic # 7 Polarization: 1.14 SS G_CDS: -2.99 Total: -1.85 kcal Atomic # 8 Polarization: -9.30 SS G_CDS: -3.04 Total: -12.35 kcal Atomic # 14 Polarization: 1.52 SS G_CDS: 2.09 Total: 3.61 kcal Atomic # 35 Polarization: -0.26 SS G_CDS: -0.69 Total: -0.95 kcal Total: -16.66 -0.31 -16.97 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26869_15734082.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.178 kcal (2) G-P(sol) polarization free energy of solvation -16.660 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.837 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.310 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.969 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds