Wall clock time and date at job start Tue Mar 9 2021 16:47:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86308 * 1 3 3 C 1.86291 * 109.47323 * 2 1 4 4 C 1.86298 * 109.46660 * 239.99871 * 2 1 3 5 5 C 1.86299 * 109.46937 * 120.00372 * 2 1 3 6 6 O 1.42901 * 109.47417 * 66.19522 * 5 2 1 7 7 C 1.35913 * 116.99925 * 77.74756 * 6 5 2 8 8 C 1.38716 * 120.04348 * 6.18245 * 7 6 5 9 9 C 1.38168 * 119.94962 * 179.97438 * 8 7 6 10 10 C 1.38318 * 120.04708 * 359.97438 * 9 8 7 11 11 Br 1.89097 * 119.95386 * 180.02562 * 10 9 8 12 12 C 1.38370 * 120.09293 * 359.73200 * 10 9 8 13 13 C 1.38119 * 120.04030 * 0.54254 * 12 10 9 14 14 C 1.50705 * 120.01919 * 179.72703 * 13 12 10 15 15 O 1.42897 * 109.47127 * 254.72878 * 14 13 12 16 16 Si 1.86302 * 109.47175 * 14.72833 * 14 13 12 17 17 H 1.48496 * 109.46846 * 60.00132 * 16 14 13 18 18 H 1.48503 * 109.47201 * 300.00207 * 16 14 13 19 19 H 1.48501 * 109.47223 * 179.97438 * 16 14 13 20 20 H 1.09005 * 109.46958 * 299.99907 * 1 2 3 21 21 H 1.09000 * 109.47029 * 60.00045 * 1 2 3 22 22 H 1.09002 * 109.46859 * 180.02562 * 1 2 3 23 23 H 1.08999 * 109.47632 * 179.97438 * 3 2 1 24 24 H 1.09004 * 109.47099 * 300.00706 * 3 2 1 25 25 H 1.09005 * 109.46961 * 59.99582 * 3 2 1 26 26 H 1.08993 * 109.47766 * 294.73850 * 4 2 1 27 27 H 1.08995 * 109.47203 * 54.74689 * 4 2 1 28 28 H 1.09011 * 109.46739 * 174.73876 * 4 2 1 29 29 H 1.08999 * 109.46832 * 306.19263 * 5 2 1 30 30 H 1.09003 * 109.46966 * 186.19633 * 5 2 1 31 31 H 1.07997 * 120.02294 * 359.97438 * 8 7 6 32 32 H 1.08000 * 119.96892 * 180.02562 * 9 8 7 33 33 H 1.08002 * 119.97824 * 180.29857 * 12 10 9 34 34 H 1.09000 * 109.47361 * 134.73035 * 14 13 12 35 35 H 0.96699 * 114.00262 * 300.00395 * 15 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.4841 1.7563 0.0000 4 6 2.4839 -0.8783 -1.5211 5 6 2.4840 -0.8783 1.5211 6 8 2.1301 -2.2610 1.4506 7 6 2.8848 -3.0506 0.6418 8 6 4.0194 -2.5365 0.0314 9 6 4.7854 -3.3411 -0.7900 10 6 4.4220 -4.6584 -1.0035 11 35 5.4727 -5.7575 -2.1277 12 6 3.2940 -5.1750 -0.3908 13 6 2.5223 -4.3724 0.4266 14 6 1.2904 -4.9338 1.0888 15 8 0.1256 -4.4391 0.4252 16 14 1.3220 -6.7936 0.9842 17 1 2.5325 -7.3077 1.6738 18 1 1.3505 -7.2088 -0.4413 19 1 0.1084 -7.3468 1.6373 20 1 -0.3633 0.5138 0.8900 21 1 -0.3633 0.5138 -0.8900 22 1 -0.3633 -1.0277 0.0005 23 1 3.5741 1.7564 0.0005 24 1 2.1207 2.2702 -0.8899 25 1 2.1207 2.2702 0.8900 26 1 2.1996 -1.9295 -1.4753 27 1 2.0458 -0.4217 -2.4086 28 1 3.5700 -0.7974 -1.5695 29 1 2.0330 -0.4325 2.4076 30 1 3.5684 -0.7833 1.5783 31 1 4.3037 -1.5080 0.1982 32 1 5.6691 -2.9412 -1.2651 33 1 3.0146 -6.2053 -0.5550 34 1 1.2695 -4.6291 2.1351 35 1 0.0437 -3.4757 0.4402 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26869_3095236.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:47:33 Heat of formation + Delta-G solvation = -77.782341 kcal Electronic energy + Delta-G solvation = -17815.260193 eV Core-core repulsion = 14983.698811 eV Total energy + Delta-G solvation = -2831.561383 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 318.020 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.66379 -38.74678 -37.53360 -33.15187 -32.79024 -30.05275 -29.84998 -28.61484 -28.48109 -27.85178 -26.77069 -23.30531 -22.48881 -19.41051 -18.28366 -17.64873 -17.03845 -16.67865 -16.17138 -15.64326 -15.40720 -14.92697 -14.66501 -14.30627 -14.14067 -14.02207 -13.93716 -13.55127 -13.44511 -13.42107 -13.27335 -13.22863 -12.85876 -12.57709 -12.19088 -11.77957 -11.67882 -11.36583 -11.16663 -11.06461 -11.02347 -10.96186 -10.70540 -10.09578 -9.08463 0.01640 0.04614 0.66853 1.22090 1.29122 1.49436 1.54325 1.58154 1.59899 2.00623 2.21235 2.32754 2.42315 3.44300 3.57594 3.85366 3.89355 4.01440 4.08500 4.25991 4.39484 4.48360 4.52287 4.53657 4.60394 4.63224 4.64053 4.64863 4.69094 4.92774 5.02362 5.08979 5.29166 5.38039 5.41287 5.45951 6.13466 6.60240 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.444 4.444 2 Si 0.990 3.010 3 C -0.449 4.449 4 C -0.451 4.451 5 C -0.248 4.248 6 O -0.289 6.289 7 C 0.152 3.848 8 C -0.194 4.194 9 C -0.047 4.047 10 C -0.122 4.122 11 Br -0.046 7.046 12 C -0.057 4.057 13 C -0.142 4.142 14 C -0.081 4.081 15 O -0.535 6.535 16 Si 1.004 2.996 17 H -0.246 1.246 18 H -0.249 1.249 19 H -0.252 1.252 20 H 0.070 0.930 21 H 0.072 0.928 22 H 0.073 0.927 23 H 0.070 0.930 24 H 0.075 0.925 25 H 0.071 0.929 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.072 0.928 29 H 0.112 0.888 30 H 0.075 0.925 31 H 0.143 0.857 32 H 0.138 0.862 33 H 0.140 0.860 34 H 0.081 0.919 35 H 0.368 0.632 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.609 3.775 1.228 4.016 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.186 2.814 3 C -0.557 4.557 4 C -0.559 4.559 5 C -0.368 4.368 6 O -0.202 6.202 7 C 0.105 3.895 8 C -0.214 4.214 9 C -0.067 4.067 10 C -0.202 4.202 11 Br 0.039 6.961 12 C -0.077 4.077 13 C -0.144 4.144 14 C -0.190 4.190 15 O -0.340 6.340 16 Si 0.823 3.177 17 H -0.169 1.169 18 H -0.172 1.172 19 H -0.176 1.176 20 H 0.090 0.910 21 H 0.091 0.909 22 H 0.092 0.908 23 H 0.089 0.911 24 H 0.094 0.906 25 H 0.091 0.909 26 H 0.092 0.908 27 H 0.091 0.909 28 H 0.091 0.909 29 H 0.131 0.869 30 H 0.093 0.907 31 H 0.161 0.839 32 H 0.156 0.844 33 H 0.157 0.843 34 H 0.099 0.901 35 H 0.216 0.784 Dipole moment (debyes) X Y Z Total from point charges 0.768 1.781 0.829 2.109 hybrid contribution 0.212 1.761 0.380 1.814 sum 0.980 3.542 1.209 3.869 Atomic orbital electron populations 1.26028 1.19569 1.04938 1.04729 0.79836 0.68718 0.66974 0.65853 1.26076 1.06359 1.18241 1.05050 1.26463 1.06270 1.08310 1.14828 1.28281 1.06032 0.84467 1.18053 1.86003 1.52809 1.19993 1.61357 1.18867 0.90140 0.90388 0.90057 1.21291 0.96446 1.01547 1.02074 1.20933 0.98751 0.91302 0.95673 1.21589 0.99064 0.95594 1.03929 1.96770 1.68690 1.66507 1.64103 1.20914 0.92687 1.00004 0.94093 1.19578 0.99944 0.92104 1.02788 1.25180 0.83339 1.12753 0.97698 1.86708 1.41634 1.26733 1.78966 0.84602 0.81000 0.70700 0.81359 1.16905 1.17238 1.17564 0.91040 0.90887 0.90773 0.91055 0.90560 0.90937 0.90767 0.90893 0.90850 0.86945 0.90707 0.83907 0.84376 0.84294 0.90129 0.78432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 1.12 8.65 101.05 0.87 1.99 16 2 Si 0.99 -3.87 11.68 -169.99 -1.99 -5.86 16 3 C -0.45 1.46 8.65 101.05 0.87 2.33 16 4 C -0.45 0.95 7.03 101.05 0.71 1.66 16 5 C -0.25 0.74 5.31 101.05 0.54 1.28 16 6 O -0.29 0.17 8.70 -19.47 -0.17 0.00 16 7 C 0.15 0.05 5.09 -39.22 -0.20 -0.15 16 8 C -0.19 0.13 5.61 -39.43 -0.22 -0.09 16 9 C -0.05 0.00 9.78 -39.58 -0.39 -0.39 16 10 C -0.12 -0.18 6.22 -39.50 -0.25 -0.42 16 11 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.37 16 12 C -0.06 -0.10 8.40 -39.58 -0.33 -0.43 16 13 C -0.14 -0.18 5.28 -104.48 -0.55 -0.74 16 14 C -0.08 -0.08 2.33 36.01 0.08 0.01 16 15 O -0.53 -0.81 12.65 -35.23 -0.45 -1.26 16 16 Si 1.00 1.00 25.74 -169.99 -4.37 -3.38 16 17 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 18 H -0.25 -0.39 6.74 56.52 0.38 -0.01 16 19 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 20 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 21 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 22 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 23 H 0.07 -0.24 7.96 -51.93 -0.41 -0.66 16 24 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 25 H 0.07 -0.24 7.96 -51.93 -0.41 -0.65 16 26 H 0.07 -0.05 6.25 -51.93 -0.32 -0.38 16 27 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 28 H 0.07 -0.18 6.54 -51.92 -0.34 -0.52 16 29 H 0.11 -0.45 7.96 -51.93 -0.41 -0.87 16 30 H 0.07 -0.28 6.07 -51.93 -0.32 -0.59 16 31 H 0.14 -0.44 4.74 -52.49 -0.25 -0.68 16 32 H 0.14 -0.22 8.06 -52.49 -0.42 -0.64 16 33 H 0.14 0.16 4.89 -52.49 -0.26 -0.10 16 34 H 0.08 -0.01 7.83 -51.93 -0.41 -0.41 16 35 H 0.37 -0.34 8.61 45.56 0.39 0.05 16 LS Contribution 302.46 15.07 4.56 4.56 Total: 0.00 -3.87 302.46 -7.61 -11.48 By element: Atomic # 1 Polarization: -4.18 SS G_CDS: -4.05 Total: -8.23 kcal Atomic # 6 Polarization: 3.91 SS G_CDS: 1.14 Total: 5.06 kcal Atomic # 8 Polarization: -0.65 SS G_CDS: -0.62 Total: -1.26 kcal Atomic # 14 Polarization: -2.88 SS G_CDS: -6.36 Total: -9.24 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.37 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -3.87 -7.61 -11.48 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26869_3095236.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.300 kcal (2) G-P(sol) polarization free energy of solvation -3.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.169 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.614 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.482 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds