Wall clock time and date at job start Tue Mar 9 2021 16:51:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 O 1.42898 * 109.47258 * 2 1 4 4 C 1.35896 * 116.99814 * 180.02562 * 3 2 1 5 5 C 1.38618 * 120.02463 * 180.27683 * 4 3 2 6 6 C 1.38656 * 119.88753 * 180.24772 * 5 4 3 7 7 O 1.35896 * 120.02815 * 179.74691 * 6 5 4 8 8 C 1.42907 * 116.99686 * 359.72909 * 7 6 5 9 9 C 1.53003 * 109.46727 * 180.02562 * 8 7 6 10 10 H 1.09006 * 112.85187 * 316.19274 * 9 8 7 11 11 C 1.53779 * 113.69268 * 87.46314 * 9 8 7 12 12 C 1.53784 * 87.08045 * 139.99100 * 11 9 8 13 13 H 1.08994 * 113.61477 * 89.11454 * 12 11 9 14 14 O 1.42895 * 113.61275 * 220.02177 * 12 11 9 15 15 C 1.42904 * 113.99895 * 247.49456 * 14 12 11 16 16 C 1.53001 * 109.46790 * 60.00170 * 15 14 12 17 17 C 1.53003 * 109.46994 * 179.97438 * 15 14 12 18 18 C 1.52997 * 109.47087 * 300.00297 * 15 14 12 19 19 C 1.53779 * 113.61005 * 185.00075 * 9 8 7 20 20 C 1.38748 * 119.94418 * 359.47621 * 6 5 4 21 21 C 1.50702 * 119.97299 * 180.22819 * 20 6 5 22 22 O 1.42901 * 109.47465 * 74.99809 * 21 20 6 23 23 Si 1.86305 * 109.47320 * 194.99845 * 21 20 6 24 24 C 1.38197 * 120.05886 * 0.24884 * 20 6 5 25 25 C 1.38161 * 120.10528 * 0.02611 * 24 20 6 26 26 H 1.08992 * 109.47194 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.47102 * 300.00182 * 1 2 3 28 28 H 1.09005 * 109.46790 * 59.99847 * 1 2 3 29 29 H 1.09001 * 109.47102 * 239.99818 * 2 1 3 30 30 H 1.09005 * 109.46790 * 120.00153 * 2 1 3 31 31 H 1.07999 * 120.05763 * 359.97438 * 5 4 3 32 32 H 1.08996 * 109.47338 * 59.99883 * 8 7 6 33 33 H 1.08996 * 109.46719 * 299.99478 * 8 7 6 34 34 H 1.09002 * 113.61557 * 25.44212 * 11 9 8 35 35 H 1.09004 * 113.61501 * 254.53633 * 11 9 8 36 36 H 1.08998 * 109.47657 * 60.00349 * 16 15 14 37 37 H 1.09010 * 109.46818 * 179.97438 * 16 15 14 38 38 H 1.08997 * 109.47442 * 299.99761 * 16 15 14 39 39 H 1.08998 * 109.47375 * 60.00483 * 17 15 14 40 40 H 1.09006 * 109.46932 * 180.02562 * 17 15 14 41 41 H 1.08998 * 109.47388 * 299.99612 * 17 15 14 42 42 H 1.08997 * 109.47278 * 60.00157 * 18 15 14 43 43 H 1.09001 * 109.47226 * 180.02562 * 18 15 14 44 44 H 1.08998 * 109.47119 * 299.99418 * 18 15 14 45 45 H 1.08997 * 113.61646 * 105.38661 * 19 9 8 46 46 H 1.09000 * 113.61527 * 334.47932 * 19 9 8 47 47 H 1.09003 * 109.47003 * 314.99592 * 21 20 6 48 48 H 0.96704 * 113.99451 * 60.00037 * 22 21 20 49 49 H 1.48495 * 110.00007 * 179.97438 * 23 21 20 50 50 H 1.48493 * 110.00196 * 301.32078 * 23 21 20 51 51 H 1.08001 * 119.94948 * 180.02562 * 24 20 6 52 52 H 1.07998 * 119.96798 * 180.02562 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 3.3537 1.5252 -0.0005 5 6 3.8841 2.8059 0.0052 6 6 5.2592 2.9842 -0.0005 7 8 5.7823 4.2385 -0.0001 8 6 4.8567 5.3273 0.0004 9 6 5.6256 6.6501 0.0002 10 1 6.4654 6.6517 0.6952 11 6 5.9894 7.1532 -1.4067 12 6 5.6415 8.5651 -0.9062 13 1 6.4855 9.0901 -0.4591 14 8 4.9400 9.3564 -1.8673 15 6 5.6886 10.4685 -2.3621 16 6 6.9651 9.9638 -3.0380 17 6 4.8444 11.2396 -3.3789 18 6 6.0580 11.3923 -1.1999 19 6 4.7216 7.8880 0.1236 20 6 6.1006 1.8810 -0.0011 21 6 7.5952 2.0741 -0.0021 22 8 8.0240 2.4811 1.2989 23 14 8.4282 0.4710 -0.4572 24 6 5.5694 0.6052 -0.0011 25 6 4.1996 0.4249 -0.0011 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 1.8934 -0.5139 -0.8900 30 1 1.8934 -0.5139 0.8900 31 1 3.2275 3.6633 0.0097 32 1 4.2300 5.2711 0.8904 33 1 4.2299 5.2717 -0.8895 34 1 5.3208 6.7894 -2.1869 35 1 7.0426 7.0259 -1.6571 36 1 6.7020 9.3057 -3.8661 37 1 7.5359 10.8122 -3.4159 38 1 7.5667 9.4142 -2.3141 39 1 3.9348 11.5992 -2.8978 40 1 5.4156 12.0877 -3.7567 41 1 4.5817 10.5813 -4.2069 42 1 6.6596 10.8427 -0.4759 43 1 6.6286 12.2409 -1.5773 44 1 5.1486 11.7519 -0.7184 45 1 4.7514 8.3540 1.1085 46 1 3.7064 7.7251 -0.2383 47 1 7.8619 2.8413 -0.7291 48 1 7.8190 1.8446 1.9975 49 1 9.9026 0.6483 -0.4624 50 1 8.0473 -0.5912 0.5080 51 1 6.2260 -0.2522 -0.0011 52 1 3.7868 -0.5731 -0.0006 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26952_14598384.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:51:35 Heat of formation + Delta-G solvation = -107.877011 kcal Electronic energy + Delta-G solvation = -29854.896046 eV Core-core repulsion = 25787.700528 eV Total energy + Delta-G solvation = -4067.195519 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.202 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.68168 -40.90534 -39.99953 -38.69428 -37.85151 -36.92917 -33.87686 -33.16916 -31.36498 -31.22379 -29.32186 -28.38819 -28.26969 -26.62373 -26.22294 -24.96046 -24.14618 -22.57549 -22.18086 -20.80737 -20.61739 -19.77653 -18.27175 -17.87558 -17.46537 -17.26905 -17.20985 -16.87184 -16.61391 -16.28222 -15.96526 -15.88212 -15.54565 -15.26431 -15.03018 -14.55472 -14.47574 -14.33371 -14.18567 -14.01921 -13.65987 -13.45179 -13.40030 -13.34399 -13.23070 -13.09976 -12.92112 -12.86296 -12.75891 -12.64867 -12.38280 -12.21078 -12.13758 -11.98501 -11.83245 -11.70308 -11.56769 -11.50490 -11.31848 -11.15498 -10.39913 -10.32618 -9.58340 -8.98991 -4.90217 0.29130 0.42878 1.37769 1.61914 2.01283 2.02880 2.24639 2.66519 2.75834 3.47730 3.56067 3.57995 3.70046 3.77046 3.81157 3.87638 3.89915 3.90961 3.96595 3.99145 4.06359 4.08034 4.11666 4.21938 4.25186 4.25909 4.37050 4.43497 4.50446 4.56244 4.57138 4.65703 4.72586 4.76365 4.77076 4.78762 4.79298 4.80918 4.83095 4.89549 4.92408 5.02179 5.04128 5.10927 5.12255 5.17093 5.30274 5.31936 5.33378 5.35179 5.39108 5.58711 6.30487 6.43037 6.48413 6.57897 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.053 3.947 3 O -0.314 6.314 4 C 0.178 3.822 5 C -0.247 4.247 6 C 0.198 3.802 7 O -0.295 6.295 8 C 0.069 3.931 9 C -0.109 4.109 10 H 0.105 0.895 11 C -0.147 4.147 12 C 0.062 3.938 13 H 0.092 0.908 14 O -0.361 6.361 15 C 0.105 3.895 16 C -0.176 4.176 17 C -0.139 4.139 18 C -0.179 4.179 19 C -0.127 4.127 20 C -0.189 4.189 21 C -0.056 4.056 22 O -0.525 6.525 23 Si 0.684 3.316 24 C -0.044 4.044 25 C -0.243 4.243 26 H 0.080 0.920 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.066 0.934 30 H 0.064 0.936 31 H 0.138 0.862 32 H 0.066 0.934 33 H 0.067 0.933 34 H 0.091 0.909 35 H 0.072 0.928 36 H 0.064 0.936 37 H 0.065 0.935 38 H 0.058 0.942 39 H 0.063 0.937 40 H 0.070 0.930 41 H 0.063 0.937 42 H 0.059 0.941 43 H 0.067 0.933 44 H 0.065 0.935 45 H 0.077 0.923 46 H 0.093 0.907 47 H 0.115 0.885 48 H 0.371 0.629 49 H -0.258 1.258 50 H -0.261 1.261 51 H 0.136 0.864 52 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.627 -1.161 -1.436 2.461 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.022 4.022 3 O -0.227 6.227 4 C 0.132 3.868 5 C -0.267 4.267 6 C 0.151 3.849 7 O -0.208 6.208 8 C -0.006 4.006 9 C -0.127 4.127 10 H 0.123 0.877 11 C -0.185 4.185 12 C 0.004 3.996 13 H 0.110 0.890 14 O -0.281 6.281 15 C 0.066 3.934 16 C -0.234 4.234 17 C -0.196 4.196 18 C -0.237 4.237 19 C -0.165 4.165 20 C -0.191 4.191 21 C -0.166 4.166 22 O -0.331 6.331 23 Si 0.586 3.414 24 C -0.062 4.062 25 C -0.262 4.262 26 H 0.099 0.901 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.084 0.916 30 H 0.082 0.918 31 H 0.155 0.845 32 H 0.084 0.916 33 H 0.086 0.914 34 H 0.109 0.891 35 H 0.091 0.909 36 H 0.083 0.917 37 H 0.084 0.916 38 H 0.077 0.923 39 H 0.082 0.918 40 H 0.089 0.911 41 H 0.082 0.918 42 H 0.078 0.922 43 H 0.086 0.914 44 H 0.084 0.916 45 H 0.096 0.904 46 H 0.112 0.888 47 H 0.133 0.867 48 H 0.218 0.782 49 H -0.183 1.183 50 H -0.186 1.186 51 H 0.153 0.847 52 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -1.015 -1.083 -1.590 2.175 hybrid contribution -0.188 -0.026 1.319 1.333 sum -1.204 -1.110 -0.271 1.659 Atomic orbital electron populations 1.21798 0.92415 1.03172 1.03703 1.22869 0.96124 0.81430 1.01730 1.86084 1.18798 1.29962 1.87890 1.18669 0.82409 0.93309 0.92444 1.20442 0.93957 0.96488 1.15783 1.18372 0.90078 0.84656 0.91828 1.86174 1.35573 1.11623 1.87389 1.22875 0.91611 0.84315 1.01788 1.22306 0.99754 0.91429 0.99217 0.87711 1.23614 1.02442 0.95872 0.96547 1.23567 0.95550 0.90278 0.90187 0.89015 1.88034 1.41260 1.40328 1.58435 1.21537 0.91813 0.86474 0.93602 1.22471 0.97399 1.01996 1.01518 1.21769 1.00072 0.99570 0.98197 1.22470 1.02394 1.00117 0.98676 1.23232 0.99520 0.94378 0.99328 1.19472 0.96043 0.91031 1.12514 1.24759 0.92358 1.11345 0.88125 1.86640 1.82102 1.47951 1.16423 0.95108 0.80226 0.75576 0.90463 1.20753 0.94836 0.95711 0.94858 1.21083 0.93826 0.98275 1.13006 0.90081 0.91434 0.91359 0.91611 0.91767 0.84470 0.91584 0.91436 0.89078 0.90900 0.91652 0.91556 0.92260 0.91778 0.91081 0.91756 0.92217 0.91366 0.91620 0.90434 0.88806 0.86680 0.78221 1.18264 1.18613 0.84666 0.84988 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.26 10.28 37.16 0.38 0.64 16 2 C 0.05 -0.04 5.46 37.16 0.20 0.16 16 3 O -0.31 -0.71 10.13 -19.41 -0.20 -0.91 16 4 C 0.18 0.42 6.68 -39.24 -0.26 0.16 16 5 C -0.25 -0.63 8.97 -39.29 -0.35 -0.98 16 6 C 0.20 0.56 6.66 -39.24 -0.26 0.30 16 7 O -0.30 -0.85 9.46 -19.41 -0.18 -1.03 16 8 C 0.07 0.05 4.58 37.16 0.17 0.22 16 9 C -0.11 -0.01 4.01 -89.81 -0.36 -0.37 16 10 H 0.10 0.04 8.14 -51.93 -0.42 -0.38 16 11 C -0.15 -0.05 7.47 -25.92 -0.19 -0.25 16 12 C 0.06 0.02 2.82 -25.91 -0.07 -0.05 16 13 H 0.09 -0.03 5.55 -51.93 -0.29 -0.32 16 14 O -0.36 -0.73 10.00 -35.23 -0.35 -1.08 16 15 C 0.10 0.05 1.11 -90.62 -0.10 -0.05 16 16 C -0.18 0.03 8.38 37.16 0.31 0.34 16 17 C -0.14 0.00 8.84 37.16 0.33 0.33 16 18 C -0.18 0.06 8.38 37.16 0.31 0.37 16 19 C -0.13 0.04 7.47 -25.92 -0.19 -0.16 16 20 C -0.19 -0.36 5.27 -104.45 -0.55 -0.91 16 21 C -0.06 -0.09 2.37 36.01 0.09 0.00 16 22 O -0.53 -1.53 12.88 -35.23 -0.45 -1.99 16 23 Si 0.68 -0.06 30.24 -169.99 -5.14 -5.20 16 24 C -0.04 -0.03 8.65 -39.62 -0.34 -0.38 16 25 C -0.24 -0.24 9.04 -39.41 -0.36 -0.60 16 26 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 27 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.07 -0.12 7.66 -51.93 -0.40 -0.51 16 30 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 31 H 0.14 0.22 6.30 -52.49 -0.33 -0.11 16 32 H 0.07 0.01 7.65 -51.93 -0.40 -0.39 16 33 H 0.07 0.01 7.38 -51.93 -0.38 -0.37 16 34 H 0.09 0.09 7.90 -51.93 -0.41 -0.32 16 35 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 36 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 37 H 0.07 -0.06 8.14 -51.92 -0.42 -0.48 16 38 H 0.06 -0.01 7.02 -51.93 -0.36 -0.38 16 39 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 40 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 41 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 42 H 0.06 -0.04 6.25 -51.93 -0.32 -0.36 16 43 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 44 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 45 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 46 H 0.09 0.00 8.10 -51.93 -0.42 -0.42 16 47 H 0.12 0.20 7.82 -51.93 -0.41 -0.21 16 48 H 0.37 -0.03 8.70 45.56 0.40 0.37 16 49 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 50 H -0.26 -0.30 6.68 56.52 0.38 0.08 16 51 H 0.14 -0.13 4.85 -52.49 -0.25 -0.39 16 52 H 0.13 -0.14 6.29 -52.49 -0.33 -0.47 16 LS Contribution 407.93 15.07 6.15 6.15 Total: 0.00 -5.60 407.93 -10.46 -16.06 By element: Atomic # 1 Polarization: -1.75 SS G_CDS: -9.03 Total: -10.78 kcal Atomic # 6 Polarization: 0.04 SS G_CDS: -1.25 Total: -1.22 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -1.19 Total: -5.01 kcal Atomic # 14 Polarization: -0.06 SS G_CDS: -5.14 Total: -5.20 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -5.60 -10.46 -16.06 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26952_14598384.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.816 kcal (2) G-P(sol) polarization free energy of solvation -5.600 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.416 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.461 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.061 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.877 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds