Wall clock time and date at job start Tue Mar 9 2021 17:07:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.42894 * 109.47184 * 2 1 4 4 C 1.35895 * 117.00039 * 179.97438 * 3 2 1 5 5 C 1.38619 * 120.02960 * 179.72172 * 4 3 2 6 6 C 1.38657 * 119.89175 * 179.77363 * 5 4 3 7 7 O 1.35894 * 120.02543 * 180.27898 * 6 5 4 8 8 C 1.42897 * 117.00339 * 0.22488 * 7 6 5 9 9 C 1.52999 * 109.47332 * 180.02562 * 8 7 6 10 10 H 1.09001 * 112.84678 * 45.33616 * 9 8 7 11 11 C 1.53783 * 113.61365 * 176.52693 * 9 8 7 12 12 C 1.53785 * 87.07787 * 89.11693 * 11 9 8 13 13 O 1.42895 * 113.61784 * 270.79679 * 12 11 9 14 14 C 1.42904 * 113.99747 * 294.79863 * 13 12 11 15 15 C 1.53007 * 113.61296 * 139.97809 * 12 11 9 16 16 F 1.39904 * 109.47009 * 54.71948 * 15 12 11 17 17 F 1.39898 * 109.46969 * 174.71870 * 15 12 11 18 18 F 1.39898 * 109.47334 * 294.71731 * 15 12 11 19 19 C 1.53777 * 113.61670 * 274.13641 * 9 8 7 20 20 C 1.38750 * 119.94234 * 0.50204 * 6 5 4 21 21 C 1.50702 * 119.97080 * 179.74920 * 20 6 5 22 22 O 1.42902 * 109.47141 * 285.02608 * 21 20 6 23 23 Si 1.86300 * 109.47174 * 165.02432 * 21 20 6 24 24 C 1.38193 * 120.05637 * 359.77696 * 20 6 5 25 25 C 1.38154 * 120.11043 * 359.94509 * 24 20 6 26 26 H 1.08997 * 109.47001 * 180.02562 * 1 2 3 27 27 H 1.08999 * 109.47313 * 299.99991 * 1 2 3 28 28 H 1.09000 * 109.47002 * 60.00136 * 1 2 3 29 29 H 1.09000 * 109.46848 * 239.99751 * 2 1 3 30 30 H 1.09000 * 109.47002 * 119.99864 * 2 1 3 31 31 H 1.08000 * 120.05001 * 0.02562 * 5 4 3 32 32 H 1.09004 * 109.47191 * 300.00076 * 8 7 6 33 33 H 1.08999 * 109.47268 * 59.99997 * 8 7 6 34 34 H 1.09006 * 113.61461 * 203.66237 * 11 9 8 35 35 H 1.08994 * 113.61602 * 334.56877 * 11 9 8 36 36 H 1.08991 * 109.47268 * 302.52245 * 14 13 12 37 37 H 1.08998 * 109.47666 * 62.52795 * 14 13 12 38 38 H 1.09003 * 109.46652 * 182.52356 * 14 13 12 39 39 H 1.09003 * 113.60866 * 25.43066 * 19 9 8 40 40 H 1.09002 * 113.62023 * 156.33200 * 19 9 8 41 41 H 1.09003 * 109.46926 * 45.02272 * 21 20 6 42 42 H 0.96698 * 114.00417 * 179.97438 * 22 21 20 43 43 H 1.48499 * 109.99909 * 59.99860 * 23 21 20 44 44 H 1.48499 * 109.99760 * 181.31757 * 23 21 20 45 45 H 1.07997 * 119.94315 * 179.97438 * 24 20 6 46 46 H 1.08002 * 119.97279 * 180.02562 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.3536 1.5253 0.0005 5 6 3.8841 2.8059 -0.0053 6 6 5.2591 2.9843 0.0001 7 8 5.7821 4.2386 0.0001 8 6 4.8567 5.3274 -0.0004 9 6 5.6254 6.6502 -0.0009 10 1 6.4487 6.6610 -0.7153 11 6 4.7189 7.8895 -0.0869 12 6 4.6655 7.8597 1.4497 13 8 3.6022 7.0593 1.9701 14 6 2.2976 7.5565 1.6653 15 6 4.7345 9.2466 2.0924 16 9 3.7256 10.0573 1.5613 17 9 4.5587 9.1289 3.4753 18 9 5.9822 9.8214 1.8282 19 6 6.0227 7.1324 1.4042 20 6 6.1006 1.8811 0.0006 21 6 7.5952 2.0742 0.0007 22 8 8.0230 2.4811 -1.3007 23 14 8.4285 0.4712 0.4554 24 6 5.5693 0.6054 0.0006 25 6 4.1996 0.4250 0.0011 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 1.8933 -0.5139 -0.8900 30 1 1.8933 -0.5138 0.8900 31 1 3.2274 3.6633 -0.0098 32 1 4.2302 5.2713 -0.8907 33 1 4.2294 5.2716 0.8892 34 1 5.2200 8.7699 -0.4894 35 1 3.7571 7.6948 -0.5611 36 1 2.1982 8.5731 2.0456 37 1 2.1521 7.5568 0.5851 38 1 1.5474 6.9187 2.1328 39 1 6.1125 6.3268 2.1330 40 1 6.8795 7.8061 1.4088 41 1 7.8623 2.8415 0.7274 42 1 8.9764 2.6247 -1.3743 43 1 8.0722 -0.5831 -0.5278 44 1 9.9015 0.6566 0.4900 45 1 6.2260 -0.2520 0.0006 46 1 3.7868 -0.5730 0.0014 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26952_17321600.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 17:07:25 Heat of formation + Delta-G solvation = -236.221404 kcal Electronic energy + Delta-G solvation = -34473.852351 eV Core-core repulsion = 29303.804713 eV Total energy + Delta-G solvation = -5170.047638 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.142 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -51.16518 -48.71336 -48.59440 -41.86493 -41.25818 -39.92421 -38.27524 -37.24257 -36.88708 -33.20156 -31.51698 -31.32745 -30.21547 -28.30905 -27.38219 -26.89249 -26.16682 -24.81327 -23.76847 -22.67500 -22.04093 -20.60647 -19.95821 -19.60853 -19.44024 -19.20159 -18.39560 -17.63706 -17.47304 -17.30684 -17.11821 -16.77764 -16.70494 -16.53721 -15.90777 -15.68465 -15.52623 -15.49406 -15.39999 -15.15431 -15.06844 -14.88859 -14.79150 -14.70299 -14.42312 -14.19665 -13.90773 -13.87558 -13.67384 -13.61134 -13.37597 -13.24891 -13.04305 -12.98009 -12.71500 -12.41571 -12.26310 -12.12212 -11.95681 -11.80934 -11.66981 -11.62151 -11.43892 -10.85619 -10.29909 -9.55261 -8.96029 -4.91445 0.32833 0.45660 1.36307 1.55852 1.62786 1.95226 1.98702 2.01190 2.21683 2.54899 2.62929 2.66203 2.85838 3.26032 3.35980 3.46798 3.52995 3.64836 3.78122 3.92889 3.94561 4.03315 4.08457 4.09054 4.13114 4.17323 4.24343 4.26331 4.28616 4.34898 4.37778 4.41266 4.44254 4.53890 4.58669 4.65978 4.69299 4.73004 4.78077 4.80086 4.93131 5.05048 5.13634 5.35657 5.41274 5.59887 5.61543 6.30342 6.46758 6.61208 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.053 3.947 3 O -0.314 6.314 4 C 0.177 3.823 5 C -0.245 4.245 6 C 0.197 3.803 7 O -0.297 6.297 8 C 0.066 3.934 9 C -0.097 4.097 10 H 0.106 0.894 11 C -0.143 4.143 12 C 0.039 3.961 13 O -0.331 6.331 14 C 0.009 3.991 15 C 0.437 3.563 16 F -0.182 7.182 17 F -0.174 7.174 18 F -0.175 7.175 19 C -0.111 4.111 20 C -0.143 4.143 21 C -0.057 4.057 22 O -0.533 6.533 23 Si 0.681 3.319 24 C -0.038 4.038 25 C -0.242 4.242 26 H 0.080 0.920 27 H 0.067 0.933 28 H 0.066 0.934 29 H 0.064 0.936 30 H 0.066 0.934 31 H 0.138 0.862 32 H 0.067 0.933 33 H 0.086 0.914 34 H 0.112 0.888 35 H 0.094 0.906 36 H 0.055 0.945 37 H 0.055 0.945 38 H 0.102 0.898 39 H 0.100 0.900 40 H 0.116 0.884 41 H 0.074 0.926 42 H 0.375 0.625 43 H -0.256 1.256 44 H -0.262 1.262 45 H 0.136 0.864 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.558 -2.195 0.492 2.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.022 4.022 3 O -0.227 6.227 4 C 0.131 3.869 5 C -0.264 4.264 6 C 0.151 3.849 7 O -0.209 6.209 8 C -0.008 4.008 9 C -0.116 4.116 10 H 0.124 0.876 11 C -0.181 4.181 12 C -0.004 4.004 13 O -0.249 6.249 14 C -0.087 4.087 15 C 0.382 3.618 16 F -0.163 7.163 17 F -0.155 7.155 18 F -0.156 7.156 19 C -0.148 4.148 20 C -0.144 4.144 21 C -0.167 4.167 22 O -0.340 6.340 23 Si 0.583 3.417 24 C -0.056 4.056 25 C -0.261 4.261 26 H 0.099 0.901 27 H 0.086 0.914 28 H 0.085 0.915 29 H 0.083 0.917 30 H 0.084 0.916 31 H 0.155 0.845 32 H 0.085 0.915 33 H 0.104 0.896 34 H 0.131 0.869 35 H 0.113 0.887 36 H 0.073 0.927 37 H 0.073 0.927 38 H 0.121 0.879 39 H 0.118 0.882 40 H 0.134 0.866 41 H 0.092 0.908 42 H 0.223 0.777 43 H -0.181 1.181 44 H -0.187 1.187 45 H 0.153 0.847 46 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -1.589 -2.795 0.256 3.225 hybrid contribution 0.201 1.134 -0.771 1.386 sum -1.388 -1.661 -0.515 2.225 Atomic orbital electron populations 1.21794 0.92455 1.03157 1.03654 1.22866 0.96078 0.81467 1.01773 1.86072 1.18786 1.29934 1.87942 1.18648 0.82392 0.93285 0.92565 1.20387 0.93807 0.96471 1.15771 1.18307 0.90155 0.84312 0.92154 1.86086 1.35472 1.11698 1.87669 1.22786 0.91424 0.83669 1.02961 1.22057 0.99324 0.91874 0.98301 0.87568 1.23592 1.02399 0.99612 0.92449 1.24106 0.93918 0.87145 0.95215 1.88090 1.13723 1.47051 1.76052 1.23161 0.83288 1.00924 1.01313 1.21187 0.73826 0.89211 0.77539 1.93187 1.60742 1.76229 1.86164 1.93221 1.94971 1.96182 1.31135 1.93179 1.42325 1.86399 1.93712 1.23308 0.92378 1.00840 0.98271 1.18430 0.93322 0.90970 1.11707 1.24517 0.95075 1.09244 0.87845 1.86625 1.27867 1.89453 1.30010 0.95179 0.79631 0.77340 0.89585 1.20692 0.94807 0.95617 0.94504 1.21074 0.93716 0.98340 1.12958 0.90105 0.91387 0.91458 0.91748 0.91587 0.84458 0.91456 0.89596 0.86938 0.88720 0.92678 0.92675 0.87931 0.88185 0.86561 0.90780 0.77746 1.18082 1.18675 0.84662 0.84899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.28 37.16 0.38 0.65 16 2 C 0.05 -0.04 5.46 37.16 0.20 0.17 16 3 O -0.31 -0.69 10.13 -19.41 -0.20 -0.88 16 4 C 0.18 0.45 6.68 -39.24 -0.26 0.18 16 5 C -0.24 -0.63 8.97 -39.29 -0.35 -0.98 16 6 C 0.20 0.59 6.66 -39.24 -0.26 0.32 16 7 O -0.30 -0.68 9.46 -19.41 -0.18 -0.87 16 8 C 0.07 0.00 4.33 37.16 0.16 0.16 16 9 C -0.10 0.14 4.19 -89.81 -0.38 -0.24 16 10 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 11 C -0.14 0.30 6.52 -25.92 -0.17 0.13 16 12 C 0.04 -0.02 0.85 -89.66 -0.08 -0.09 16 13 O -0.33 -0.10 8.34 -35.23 -0.29 -0.39 16 14 C 0.01 -0.01 10.43 101.05 1.05 1.04 16 15 C 0.44 0.49 2.51 37.16 0.09 0.58 16 16 F -0.18 -0.26 15.24 2.25 0.03 -0.22 16 17 F -0.17 -0.49 17.09 2.25 0.04 -0.45 16 18 F -0.17 -0.21 15.82 2.25 0.04 -0.17 16 19 C -0.11 0.13 6.92 -25.78 -0.18 -0.05 16 20 C -0.14 -0.37 5.31 -104.45 -0.55 -0.93 16 21 C -0.06 -0.08 2.36 36.01 0.09 0.01 16 22 O -0.53 -1.32 12.86 -35.23 -0.45 -1.77 16 23 Si 0.68 -0.15 30.20 -169.99 -5.13 -5.28 16 24 C -0.04 -0.06 8.65 -39.63 -0.34 -0.40 16 25 C -0.24 -0.34 9.04 -39.41 -0.36 -0.70 16 26 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 30 H 0.07 -0.12 7.66 -51.93 -0.40 -0.52 16 31 H 0.14 0.19 6.30 -52.49 -0.33 -0.14 16 32 H 0.07 -0.04 7.65 -51.93 -0.40 -0.44 16 33 H 0.09 0.01 5.62 -51.93 -0.29 -0.28 16 34 H 0.11 -0.33 8.07 -51.93 -0.42 -0.75 16 35 H 0.09 -0.27 6.70 -51.93 -0.35 -0.62 16 36 H 0.05 -0.04 6.25 -51.93 -0.32 -0.37 16 37 H 0.05 -0.15 6.76 -51.93 -0.35 -0.50 16 38 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 39 H 0.10 -0.06 8.10 -51.93 -0.42 -0.48 16 40 H 0.12 -0.24 7.01 -51.93 -0.36 -0.60 16 41 H 0.07 0.03 7.82 -51.93 -0.41 -0.37 16 42 H 0.38 -0.57 8.74 45.56 0.40 -0.17 16 43 H -0.26 -0.58 6.75 56.52 0.38 -0.20 16 44 H -0.26 -0.45 7.11 56.52 0.40 -0.04 16 45 H 0.14 -0.01 4.89 -52.49 -0.26 -0.26 16 46 H 0.13 -0.10 6.29 -52.49 -0.33 -0.43 16 LS Contribution 378.40 15.07 5.70 5.70 Total: 0.00 -6.77 378.40 -7.37 -14.14 By element: Atomic # 1 Polarization: -3.69 SS G_CDS: -5.97 Total: -9.66 kcal Atomic # 6 Polarization: 0.81 SS G_CDS: -0.95 Total: -0.14 kcal Atomic # 8 Polarization: -2.78 SS G_CDS: -1.13 Total: -3.91 kcal Atomic # 9 Polarization: -0.96 SS G_CDS: 0.11 Total: -0.85 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: -5.13 Total: -5.28 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -6.77 -7.37 -14.14 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26952_17321600.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -222.079 kcal (2) G-P(sol) polarization free energy of solvation -6.775 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -228.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.368 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.142 kcal (6) G-S(sol) free energy of system = (1) + (5) -236.221 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds