Wall clock time and date at job start Tue Mar 9 2021 18:00:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34753 * 116.99950 * 2 1 4 4 O 1.21508 * 119.99687 * 359.97438 * 3 2 1 5 5 C 1.47465 * 119.99943 * 179.97438 * 3 2 1 6 6 C 1.39778 * 120.09485 * 0.02562 * 5 3 2 7 7 C 1.37695 * 119.90563 * 179.97438 * 6 5 3 8 8 C 1.38994 * 120.09343 * 0.02791 * 7 6 5 9 9 O 1.35700 * 119.90626 * 179.97438 * 8 7 6 10 10 C 1.42895 * 117.00008 * 0.02562 * 9 8 7 11 11 O 1.42902 * 109.46814 * 75.00371 * 10 9 8 12 12 Si 1.63100 * 114.00145 * 179.97438 * 11 10 9 13 13 C 1.86303 * 109.47486 * 300.00434 * 12 11 10 14 14 C 1.86308 * 109.47094 * 60.00049 * 12 11 10 15 15 C 1.86299 * 109.47422 * 179.97438 * 12 11 10 16 16 C 1.53001 * 109.46867 * 60.00034 * 15 12 11 17 17 C 1.52999 * 109.47418 * 180.02562 * 15 12 11 18 18 C 1.53000 * 109.47151 * 300.00145 * 15 12 11 19 19 C 1.39030 * 120.18848 * 359.97438 * 8 7 6 20 20 C 1.50701 * 119.95380 * 179.97438 * 19 8 7 21 21 O 1.42895 * 109.47079 * 75.00658 * 20 19 8 22 22 Si 1.86301 * 109.47149 * 195.00153 * 20 19 8 23 23 H 1.48506 * 109.47302 * 59.99966 * 22 20 19 24 24 H 1.48503 * 109.47334 * 300.00099 * 22 20 19 25 25 H 1.48500 * 109.47376 * 180.02562 * 22 20 19 26 26 C 1.37658 * 120.09148 * 0.25870 * 19 8 7 27 27 H 1.09006 * 109.46926 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.47444 * 300.00084 * 1 2 3 29 29 H 1.09000 * 109.47191 * 60.00158 * 1 2 3 30 30 H 1.07994 * 120.04343 * 359.97438 * 6 5 3 31 31 H 1.07994 * 119.95273 * 179.97438 * 7 6 5 32 32 H 1.08999 * 109.47212 * 195.00102 * 10 9 8 33 33 H 1.08998 * 109.47320 * 315.00677 * 10 9 8 34 34 H 1.08996 * 109.47194 * 59.99300 * 13 12 11 35 35 H 1.08993 * 109.47326 * 179.97438 * 13 12 11 36 36 H 1.09004 * 109.46668 * 299.99991 * 13 12 11 37 37 H 1.09002 * 109.46725 * 59.99795 * 14 12 11 38 38 H 1.08993 * 109.47285 * 179.97438 * 14 12 11 39 39 H 1.09003 * 109.47178 * 300.00328 * 14 12 11 40 40 H 1.09002 * 109.46720 * 60.00368 * 16 15 12 41 41 H 1.09003 * 109.47205 * 179.97438 * 16 15 12 42 42 H 1.08993 * 109.47262 * 300.00259 * 16 15 12 43 43 H 1.08999 * 109.46770 * 60.00062 * 17 15 12 44 44 H 1.08996 * 109.47471 * 180.02562 * 17 15 12 45 45 H 1.09002 * 109.46942 * 300.00418 * 17 15 12 46 46 H 1.09002 * 109.46725 * 59.99787 * 18 15 12 47 47 H 1.08999 * 109.46928 * 179.97438 * 18 15 12 48 48 H 1.08999 * 109.47252 * 300.00070 * 18 15 12 49 49 H 1.09001 * 109.47380 * 315.00054 * 20 19 8 50 50 H 0.96708 * 113.99763 * 299.99687 * 21 20 19 51 51 H 1.08005 * 120.04576 * 179.70445 * 26 19 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0637 1.2007 0.0000 4 8 1.4018 2.2197 -0.0005 5 6 3.5363 1.2778 0.0006 6 6 4.2995 0.1068 0.0006 7 6 5.6744 0.1834 0.0006 8 6 6.3033 1.4229 0.0012 9 8 7.6584 1.4940 0.0017 10 6 8.3730 0.2565 0.0010 11 8 8.3097 -0.3293 -1.3009 12 14 9.0944 -1.7536 -1.4263 13 6 10.8961 -1.5079 -1.0211 14 6 8.3516 -2.9789 -0.2355 15 6 8.9311 -2.4016 -3.1653 16 6 9.5407 -1.3956 -4.1437 17 6 9.6667 -3.7380 -3.2828 18 6 7.4513 -2.6036 -3.4975 19 6 5.5480 2.5902 0.0012 20 6 6.2354 3.9312 0.0024 21 8 6.7638 4.1968 -1.2984 22 14 5.0085 5.2576 0.4569 23 1 4.4592 4.9816 1.8087 24 1 3.9024 5.2692 -0.5339 25 1 5.6857 6.5792 0.4575 26 6 4.1731 2.5225 0.0061 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 3.8116 -0.8566 0.0006 31 1 6.2648 -0.7208 0.0010 32 1 9.4142 0.4380 0.2675 33 1 7.9251 -0.4221 0.7269 34 1 10.9913 -1.1290 -0.0035 35 1 11.4204 -2.4598 -1.1045 36 1 11.3307 -0.7910 -1.7178 37 1 7.2974 -3.1226 -0.4725 38 1 8.8757 -3.9308 -0.3196 39 1 8.4467 -2.6000 0.7822 40 1 10.5949 -1.2518 -3.9071 41 1 9.4456 -1.7749 -5.1612 42 1 9.0163 -0.4438 -4.0599 43 1 9.2320 -4.4545 -2.5858 44 1 9.5715 -4.1169 -4.3004 45 1 10.7209 -3.5945 -3.0460 46 1 6.9269 -1.6517 -3.4136 47 1 7.3558 -2.9823 -4.5151 48 1 7.0170 -3.3203 -2.8004 49 1 7.0473 3.9228 0.7297 50 1 7.4109 3.5448 -1.6007 51 1 3.5870 3.4298 0.0109 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_2787264_14468166.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:00:48 Heat of formation + Delta-G solvation = -230.628442 kcal Electronic energy + Delta-G solvation = -31134.111283 eV Core-core repulsion = 26929.316806 eV Total energy + Delta-G solvation = -4204.794477 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 356.171 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.92762 -41.09486 -39.18197 -37.52413 -37.25759 -37.03374 -36.95989 -32.96254 -31.76706 -29.71401 -29.28474 -28.75443 -27.99574 -27.53705 -27.41287 -26.66150 -24.61546 -23.13416 -21.70214 -20.60127 -19.65375 -18.95619 -18.60300 -18.29034 -17.88586 -17.45154 -17.27082 -16.67569 -16.16485 -16.03523 -15.75714 -15.36892 -15.30749 -15.00979 -14.94117 -14.85175 -14.64674 -14.32992 -14.26037 -14.18320 -13.87626 -13.78832 -13.64243 -13.60353 -13.45595 -13.12094 -13.06539 -13.05317 -12.84513 -12.70266 -12.52553 -12.17103 -12.11676 -11.99090 -11.74435 -11.73686 -11.70171 -11.69945 -11.54312 -11.17556 -10.97200 -10.67283 -10.25410 -10.16151 -9.50502 -0.36881 0.09552 1.00431 1.27211 1.45877 1.51166 1.61766 1.65720 1.71354 1.78425 1.88874 2.07730 2.24957 2.59680 3.39600 3.49382 3.60248 3.72772 3.77326 3.95292 3.98511 3.99337 3.99486 4.09113 4.20368 4.24616 4.29051 4.32980 4.43581 4.45973 4.49847 4.50435 4.52952 4.59921 4.69100 4.72560 4.74390 4.80864 4.88578 4.96284 4.99188 4.99741 5.03842 5.10206 5.12832 5.21661 5.27467 5.35192 5.37678 5.37829 5.40528 5.43362 5.99971 6.67234 6.78386 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.356 6.356 3 C 0.511 3.489 4 O -0.505 6.505 5 C -0.158 4.158 6 C -0.017 4.017 7 C -0.207 4.207 8 C 0.182 3.818 9 O -0.293 6.293 10 C 0.246 3.754 11 O -0.644 6.644 12 Si 1.294 2.706 13 C -0.514 4.514 14 C -0.516 4.516 15 C -0.372 4.372 16 C -0.135 4.135 17 C -0.138 4.138 18 C -0.135 4.135 19 C -0.155 4.155 20 C -0.080 4.080 21 O -0.536 6.536 22 Si 1.003 2.997 23 H -0.246 1.246 24 H -0.248 1.248 25 H -0.252 1.252 26 C -0.021 4.021 27 H 0.104 0.896 28 H 0.065 0.935 29 H 0.065 0.935 30 H 0.145 0.855 31 H 0.142 0.858 32 H 0.115 0.885 33 H 0.067 0.933 34 H 0.067 0.933 35 H 0.078 0.922 36 H 0.076 0.924 37 H 0.075 0.925 38 H 0.080 0.920 39 H 0.067 0.933 40 H 0.055 0.945 41 H 0.055 0.945 42 H 0.060 0.940 43 H 0.056 0.944 44 H 0.058 0.942 45 H 0.056 0.944 46 H 0.060 0.940 47 H 0.055 0.945 48 H 0.054 0.946 49 H 0.081 0.919 50 H 0.371 0.629 51 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.126 -5.181 2.102 6.405 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.273 6.273 3 C 0.357 3.643 4 O -0.394 6.394 5 C -0.159 4.159 6 C -0.036 4.036 7 C -0.225 4.225 8 C 0.136 3.864 9 O -0.206 6.206 10 C 0.133 3.867 11 O -0.604 6.604 12 Si 1.427 2.573 13 C -0.616 4.616 14 C -0.618 4.618 15 C -0.416 4.416 16 C -0.192 4.192 17 C -0.195 4.195 18 C -0.192 4.192 19 C -0.156 4.156 20 C -0.188 4.188 21 O -0.341 6.341 22 Si 0.822 3.178 23 H -0.169 1.169 24 H -0.171 1.171 25 H -0.176 1.176 26 C -0.039 4.039 27 H 0.123 0.877 28 H 0.084 0.916 29 H 0.084 0.916 30 H 0.163 0.837 31 H 0.159 0.841 32 H 0.132 0.868 33 H 0.085 0.915 34 H 0.086 0.914 35 H 0.097 0.903 36 H 0.095 0.905 37 H 0.094 0.906 38 H 0.099 0.901 39 H 0.086 0.914 40 H 0.074 0.926 41 H 0.074 0.926 42 H 0.079 0.921 43 H 0.075 0.925 44 H 0.077 0.923 45 H 0.075 0.925 46 H 0.079 0.921 47 H 0.074 0.926 48 H 0.073 0.927 49 H 0.099 0.901 50 H 0.219 0.781 51 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 1.885 -3.389 2.221 4.469 hybrid contribution 0.827 -1.769 -0.180 1.961 sum 2.712 -5.158 2.040 6.174 Atomic orbital electron populations 1.23330 0.75465 1.04020 1.02896 1.86525 1.23946 1.32423 1.84356 1.21015 0.88895 0.81622 0.72808 1.90869 1.66735 1.35980 1.45827 1.18888 0.89350 0.94454 1.13258 1.21296 0.92873 0.98228 0.91157 1.21274 0.95513 0.96887 1.08856 1.19059 0.82518 0.93338 0.91456 1.86199 1.15564 1.32570 1.86262 1.23521 0.96223 0.83513 0.83406 1.85329 1.82558 1.57136 1.35395 0.76542 0.61384 0.53542 0.65869 1.27041 1.23603 1.05593 1.05348 1.27078 1.08296 1.14260 1.12172 1.25758 0.98573 1.00619 1.16661 1.21524 1.00253 0.98468 0.99000 1.21565 0.99754 0.95652 1.02513 1.21527 0.94096 1.01784 1.01832 1.19561 0.92643 0.94700 1.08717 1.25172 1.04490 1.00027 0.89111 1.86697 1.62416 1.53353 1.31674 0.84613 0.76643 0.76431 0.80067 1.16926 1.17129 1.17564 1.21046 0.92901 0.97623 0.92326 0.87748 0.91625 0.91604 0.83699 0.84064 0.86814 0.91516 0.91395 0.90272 0.90474 0.90577 0.90089 0.91373 0.92635 0.92631 0.92073 0.92461 0.92314 0.92452 0.92134 0.92611 0.92658 0.90131 0.78073 0.83645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.72 9.81 -40.64 -0.40 -1.12 16 3 C 0.51 1.94 7.89 34.49 0.27 2.21 16 4 O -0.51 -3.23 16.13 -19.27 -0.31 -3.54 16 5 C -0.16 -0.40 5.87 -104.97 -0.62 -1.01 16 6 C -0.02 -0.01 9.61 -39.20 -0.38 -0.38 16 7 C -0.21 0.05 8.76 -39.50 -0.35 -0.30 16 8 C 0.18 0.14 6.57 -39.01 -0.26 -0.12 16 9 O -0.29 0.12 9.27 -42.62 -0.40 -0.27 16 10 C 0.25 -0.68 5.42 101.05 0.55 -0.13 16 11 O -0.64 1.18 8.02 -59.04 -0.47 0.70 16 12 Si 1.29 -4.18 8.45 -169.99 -1.44 -5.62 16 13 C -0.51 1.49 8.50 101.05 0.86 2.35 16 14 C -0.52 1.68 8.50 101.05 0.86 2.54 16 15 C -0.37 0.65 0.53 -90.62 -0.05 0.60 16 16 C -0.14 0.14 7.85 37.16 0.29 0.43 16 17 C -0.14 0.27 7.85 37.16 0.29 0.56 16 18 C -0.14 0.16 7.85 37.16 0.29 0.45 16 19 C -0.16 -0.28 5.28 -104.54 -0.55 -0.83 16 20 C -0.08 -0.10 2.33 36.01 0.08 -0.02 16 21 O -0.54 -1.18 12.65 -35.23 -0.45 -1.62 16 22 Si 1.00 1.67 25.73 -169.99 -4.37 -2.71 16 23 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 24 H -0.25 -0.73 6.74 56.52 0.38 -0.35 16 25 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 26 C -0.02 -0.06 8.20 -39.20 -0.32 -0.38 16 27 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 28 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 30 H 0.15 -0.22 7.60 -52.49 -0.40 -0.62 16 31 H 0.14 -0.33 5.83 -52.49 -0.31 -0.64 16 32 H 0.11 -0.59 7.21 -51.93 -0.37 -0.96 16 33 H 0.07 -0.31 5.76 -51.93 -0.30 -0.61 16 34 H 0.07 -0.25 7.48 -51.93 -0.39 -0.64 16 35 H 0.08 -0.23 7.79 -51.93 -0.40 -0.64 16 36 H 0.08 -0.18 7.79 -51.93 -0.40 -0.59 16 37 H 0.08 -0.24 7.79 -51.93 -0.40 -0.64 16 38 H 0.08 -0.26 7.79 -51.93 -0.40 -0.67 16 39 H 0.07 -0.27 7.48 -51.93 -0.39 -0.66 16 40 H 0.05 -0.09 7.80 -51.93 -0.40 -0.50 16 41 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 42 H 0.06 -0.03 7.96 -51.93 -0.41 -0.45 16 43 H 0.06 -0.15 7.79 -51.93 -0.40 -0.56 16 44 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.06 -0.15 7.80 -51.93 -0.40 -0.55 16 46 H 0.06 -0.04 7.97 -51.93 -0.41 -0.45 16 47 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 48 H 0.05 -0.11 7.79 -51.93 -0.40 -0.51 16 49 H 0.08 -0.03 7.82 -51.93 -0.41 -0.44 16 50 H 0.37 0.01 8.59 45.56 0.39 0.40 16 51 H 0.15 0.44 4.46 -52.48 -0.23 0.21 16 LS Contribution 411.91 15.07 6.21 6.21 Total: 0.00 -6.46 411.91 -7.40 -13.86 By element: Atomic # 1 Polarization: -5.10 SS G_CDS: -7.82 Total: -12.92 kcal Atomic # 6 Polarization: 4.99 SS G_CDS: 2.05 Total: 7.03 kcal Atomic # 8 Polarization: -3.83 SS G_CDS: -2.02 Total: -5.85 kcal Atomic # 14 Polarization: -2.51 SS G_CDS: -5.81 Total: -8.32 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -6.46 -7.40 -13.86 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_2787264_14468166.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -216.772 kcal (2) G-P(sol) polarization free energy of solvation -6.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -223.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.856 kcal (6) G-S(sol) free energy of system = (1) + (5) -230.628 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds