Wall clock time and date at job start Tue Mar 9 2021 18:02:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34746 * 117.00196 * 2 1 4 4 O 1.21507 * 119.99858 * 359.97438 * 3 2 1 5 5 C 1.47466 * 120.00131 * 179.97438 * 3 2 1 6 6 C 1.39776 * 120.09281 * 179.97438 * 5 3 2 7 7 C 1.37700 * 119.90675 * 180.02562 * 6 5 3 8 8 C 1.50699 * 119.95589 * 179.97438 * 7 6 5 9 9 O 1.42893 * 109.47336 * 104.97555 * 8 7 6 10 10 Si 1.86302 * 109.46721 * 344.97705 * 8 7 6 11 11 C 1.38993 * 120.09118 * 359.97438 * 7 6 5 12 12 O 1.35705 * 119.90532 * 180.02562 * 11 7 6 13 13 C 1.42901 * 116.99910 * 179.97438 * 12 11 7 14 14 C 1.52998 * 109.47046 * 180.02562 * 13 12 11 15 15 H 1.09000 * 109.46903 * 305.00059 * 14 13 12 16 16 C 1.52997 * 109.47449 * 64.99681 * 14 13 12 17 17 C 1.52998 * 109.47449 * 179.97438 * 16 14 13 18 18 C 1.52999 * 109.47067 * 300.00474 * 17 16 14 19 19 H 1.09000 * 109.47181 * 299.99734 * 18 17 16 20 20 O 1.42902 * 109.47124 * 180.02562 * 18 17 16 21 21 C 1.52997 * 109.47373 * 59.99480 * 18 17 16 22 22 C 1.52998 * 109.47449 * 300.00286 * 21 18 17 23 23 C 1.39033 * 120.19012 * 0.30038 * 11 7 6 24 24 C 1.37666 * 120.08938 * 359.44280 * 23 11 7 25 25 H 1.08997 * 109.46821 * 60.00401 * 1 2 3 26 26 H 1.09002 * 109.46788 * 180.02562 * 1 2 3 27 27 H 1.08994 * 109.46938 * 300.00493 * 1 2 3 28 28 H 1.08000 * 120.04747 * 359.97438 * 6 5 3 29 29 H 1.08996 * 109.47127 * 224.97959 * 8 7 6 30 30 H 0.96701 * 113.99671 * 59.99861 * 9 8 7 31 31 H 1.48499 * 110.00380 * 299.99861 * 10 8 7 32 32 H 1.48500 * 110.00073 * 61.31958 * 10 8 7 33 33 H 1.08999 * 109.47144 * 300.00260 * 13 12 11 34 34 H 1.08998 * 109.47043 * 59.99859 * 13 12 11 35 35 H 1.08999 * 109.47516 * 300.00723 * 16 14 13 36 36 H 1.09000 * 109.46760 * 60.00290 * 16 14 13 37 37 H 1.08996 * 109.47008 * 180.02562 * 17 16 14 38 38 H 1.09000 * 109.46903 * 60.00378 * 17 16 14 39 39 H 0.96699 * 114.00051 * 59.99429 * 20 18 17 40 40 H 1.08999 * 109.47516 * 179.97438 * 21 18 17 41 41 H 1.09003 * 109.46559 * 60.00492 * 21 18 17 42 42 H 1.09000 * 109.46903 * 299.99622 * 22 21 18 43 43 H 1.08996 * 109.47008 * 179.97438 * 22 21 18 44 44 H 1.07996 * 119.95568 * 179.72539 * 23 11 7 45 45 H 1.08001 * 120.04598 * 180.30057 * 24 23 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0638 1.2006 0.0000 4 8 1.4020 2.2196 -0.0005 5 6 3.5364 1.2777 0.0006 6 6 4.1730 2.5221 0.0000 7 6 5.5484 2.5897 0.0000 8 6 6.2359 3.9307 -0.0011 9 8 6.7629 4.1970 1.3001 10 14 5.0095 5.2568 -0.4577 11 6 6.3034 1.4227 0.0011 12 8 7.6586 1.4937 0.0016 13 6 8.3731 0.2562 0.0033 14 6 9.8773 0.5357 0.0043 15 1 10.1275 1.1809 -0.8379 16 6 10.2663 1.2295 1.3113 17 6 11.7706 1.5084 1.3126 18 6 12.5342 0.1884 1.1889 19 1 12.2836 -0.4566 2.0311 20 8 13.9393 0.4489 1.1907 21 6 12.1452 -0.5054 -0.1181 22 6 10.6409 -0.7843 -0.1194 23 6 5.6743 0.1829 -0.0041 24 6 4.2998 0.1064 0.0012 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5139 0.8899 28 1 3.5870 3.4293 -0.0012 29 1 7.0485 3.9218 -0.7275 30 1 7.4095 3.5451 1.6034 31 1 4.4540 4.9914 -1.8090 32 1 3.9128 5.3005 0.5426 33 1 8.1093 -0.3144 0.8938 34 1 8.1101 -0.3164 -0.8861 35 1 9.7219 2.1696 1.3997 36 1 10.0161 0.5843 2.1535 37 1 12.0478 2.0023 2.2439 38 1 12.0212 2.1534 0.4704 39 1 14.2568 0.8883 1.9914 40 1 12.6895 -1.4456 -0.2064 41 1 12.3959 0.1396 -0.9603 42 1 10.3903 -1.4293 0.7228 43 1 10.3638 -1.2782 -1.0507 44 1 6.2647 -0.7214 -0.0077 45 1 3.8118 -0.8571 0.0021 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_2787264_16737254.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:02:09 Heat of formation + Delta-G solvation = -191.577013 kcal Electronic energy + Delta-G solvation = -27760.457550 eV Core-core repulsion = 23709.337052 eV Total energy + Delta-G solvation = -4051.120499 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.154 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.00241 -41.19599 -40.21788 -38.79640 -37.57304 -37.30632 -36.77697 -33.16735 -32.31784 -31.99370 -31.39863 -28.73992 -27.09807 -26.74105 -24.80060 -23.93519 -23.50030 -22.16315 -21.72018 -21.04439 -19.53234 -18.96711 -18.29567 -18.13718 -17.97261 -17.40789 -17.27921 -17.20275 -16.51500 -16.18729 -15.72073 -15.61225 -15.45943 -15.11135 -14.91833 -14.83458 -14.54591 -14.37018 -14.02507 -13.92937 -13.63190 -13.44258 -13.38158 -13.33350 -13.08922 -12.76458 -12.70754 -12.30792 -12.16843 -12.07096 -11.83431 -11.80357 -11.76837 -11.62532 -11.28980 -11.22805 -11.02542 -10.82719 -10.29740 -9.54378 -4.79585 -0.45317 -0.02209 1.38232 1.42560 1.62941 1.71003 1.78351 2.03461 2.48726 3.04141 3.33082 3.41713 3.44557 3.52468 3.60135 3.64198 3.78863 3.85711 3.89559 3.94199 3.98780 4.05952 4.15293 4.15606 4.16866 4.19636 4.23764 4.27526 4.30754 4.40146 4.41151 4.52961 4.61794 4.64720 4.78572 4.86170 4.88683 4.91346 4.94334 5.00210 5.00858 5.02793 5.14239 5.25698 5.31111 5.33314 6.01377 6.57318 6.63130 6.70579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.355 6.355 3 C 0.511 3.489 4 O -0.506 6.506 5 C -0.162 4.162 6 C -0.017 4.017 7 C -0.157 4.157 8 C -0.069 4.069 9 O -0.532 6.532 10 Si 0.740 3.260 11 C 0.183 3.817 12 O -0.304 6.304 13 C 0.059 3.941 14 C -0.088 4.088 15 H 0.087 0.913 16 C -0.111 4.111 17 C -0.152 4.152 18 C 0.103 3.897 19 H 0.055 0.945 20 O -0.569 6.569 21 C -0.112 4.112 22 C -0.110 4.110 23 C -0.219 4.219 24 C -0.013 4.013 25 H 0.065 0.935 26 H 0.105 0.895 27 H 0.065 0.935 28 H 0.144 0.856 29 H 0.079 0.921 30 H 0.365 0.635 31 H -0.247 1.247 32 H -0.248 1.248 33 H 0.070 0.930 34 H 0.070 0.930 35 H 0.074 0.926 36 H 0.064 0.936 37 H 0.067 0.933 38 H 0.073 0.927 39 H 0.380 0.620 40 H 0.074 0.926 41 H 0.072 0.928 42 H 0.069 0.931 43 H 0.074 0.926 44 H 0.142 0.858 45 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.715 -3.181 0.211 4.187 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.272 6.272 3 C 0.356 3.644 4 O -0.395 6.395 5 C -0.163 4.163 6 C -0.035 4.035 7 C -0.158 4.158 8 C -0.178 4.178 9 O -0.337 6.337 10 Si 0.638 3.362 11 C 0.135 3.865 12 O -0.216 6.216 13 C -0.016 4.016 14 C -0.106 4.106 15 H 0.105 0.895 16 C -0.149 4.149 17 C -0.190 4.190 18 C 0.044 3.956 19 H 0.073 0.927 20 O -0.375 6.375 21 C -0.149 4.149 22 C -0.147 4.147 23 C -0.238 4.238 24 C -0.031 4.031 25 H 0.084 0.916 26 H 0.124 0.876 27 H 0.084 0.916 28 H 0.161 0.839 29 H 0.097 0.903 30 H 0.212 0.788 31 H -0.171 1.171 32 H -0.173 1.173 33 H 0.088 0.912 34 H 0.088 0.912 35 H 0.093 0.907 36 H 0.083 0.917 37 H 0.086 0.914 38 H 0.091 0.909 39 H 0.227 0.773 40 H 0.092 0.908 41 H 0.091 0.909 42 H 0.088 0.912 43 H 0.093 0.907 44 H 0.160 0.840 45 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 1.357 -2.341 -0.633 2.779 hybrid contribution 0.121 -1.741 0.773 1.909 sum 1.478 -4.082 0.140 4.344 Atomic orbital electron populations 1.23344 0.75348 1.04104 1.02925 1.86522 1.24043 1.32307 1.84319 1.20996 0.88862 0.81672 0.72828 1.90871 1.66742 1.36016 1.45849 1.18894 0.89476 0.94409 1.13544 1.20962 0.92980 0.97240 0.92341 1.19612 0.92581 0.94744 1.08862 1.25126 1.04526 0.99423 0.88750 1.86743 1.62196 1.52985 1.31825 0.93184 0.76395 0.87125 0.79506 1.19082 0.82750 0.93193 0.91426 1.86007 1.14745 1.33804 1.87078 1.23078 0.91916 0.84420 1.02174 1.21251 0.90976 0.98283 1.00111 0.89491 1.21522 0.95512 1.01302 0.96549 1.22275 0.95532 0.98243 1.02956 1.21839 0.80730 0.95028 0.98013 0.92748 1.86519 1.22890 1.82503 1.45581 1.21437 0.94963 1.01380 0.97139 1.21474 0.94297 0.96006 1.02972 1.21301 0.95629 0.96891 1.09960 1.21312 0.92922 0.98204 0.90711 0.91597 0.87630 0.91586 0.83905 0.90318 0.78786 1.17127 1.17280 0.91223 0.91216 0.90683 0.91681 0.91383 0.90854 0.77301 0.90760 0.90883 0.91202 0.90717 0.83984 0.83583 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.00 10.57 101.05 1.07 1.07 16 2 O -0.36 -0.84 9.81 -40.62 -0.40 -1.24 16 3 C 0.51 2.22 7.89 34.49 0.27 2.49 16 4 O -0.51 -3.60 16.13 -19.27 -0.31 -3.91 16 5 C -0.16 -0.49 5.87 -104.98 -0.62 -1.11 16 6 C -0.02 -0.06 8.20 -39.20 -0.32 -0.38 16 7 C -0.16 -0.33 5.27 -104.54 -0.55 -0.88 16 8 C -0.07 -0.08 2.33 36.00 0.08 0.00 16 9 O -0.53 -0.87 12.65 -35.23 -0.45 -1.32 16 10 Si 0.74 0.80 30.40 -169.99 -5.17 -4.37 16 11 C 0.18 0.11 6.63 -39.01 -0.26 -0.15 16 12 O -0.30 0.23 8.54 -18.82 -0.16 0.07 16 13 C 0.06 -0.17 4.11 37.16 0.15 -0.02 16 14 C -0.09 0.26 2.43 -90.62 -0.22 0.04 16 15 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 16 C -0.11 0.30 5.10 -26.73 -0.14 0.16 16 17 C -0.15 0.32 5.55 -26.73 -0.15 0.17 16 18 C 0.10 -0.13 3.47 -26.73 -0.09 -0.22 16 19 H 0.05 -0.10 8.14 -51.93 -0.42 -0.52 16 20 O -0.57 -0.17 13.32 -35.23 -0.47 -0.64 16 21 C -0.11 0.16 5.57 -26.73 -0.15 0.01 16 22 C -0.11 0.35 5.20 -26.73 -0.14 0.21 16 23 C -0.22 0.11 9.01 -39.50 -0.36 -0.25 16 24 C -0.01 -0.01 9.61 -39.20 -0.38 -0.38 16 25 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 26 H 0.11 -0.29 8.14 -51.93 -0.42 -0.72 16 27 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.14 0.64 4.51 -52.49 -0.24 0.41 16 29 H 0.08 0.00 7.82 -51.93 -0.41 -0.40 16 30 H 0.36 -0.22 8.60 45.56 0.39 0.17 16 31 H -0.25 -0.65 7.11 56.52 0.40 -0.25 16 32 H -0.25 -1.00 6.81 56.52 0.38 -0.61 16 33 H 0.07 -0.26 7.66 -51.93 -0.40 -0.66 16 34 H 0.07 -0.25 7.64 -51.93 -0.40 -0.65 16 35 H 0.07 -0.17 7.82 -51.93 -0.41 -0.58 16 36 H 0.06 -0.19 8.14 -51.93 -0.42 -0.61 16 37 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.38 -1.31 9.08 45.56 0.41 -0.90 16 40 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 41 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 43 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 44 H 0.14 -0.43 6.28 -52.49 -0.33 -0.76 16 45 H 0.15 -0.21 7.60 -52.49 -0.40 -0.60 16 LS Contribution 366.27 15.07 5.52 5.52 Total: 0.00 -7.42 366.27 -9.28 -16.69 By element: Atomic # 1 Polarization: -5.52 SS G_CDS: -6.05 Total: -11.57 kcal Atomic # 6 Polarization: 2.55 SS G_CDS: -1.79 Total: 0.76 kcal Atomic # 8 Polarization: -5.25 SS G_CDS: -1.79 Total: -7.04 kcal Atomic # 14 Polarization: 0.80 SS G_CDS: -5.17 Total: -4.37 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -7.42 -9.28 -16.69 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_2787264_16737254.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -174.884 kcal (2) G-P(sol) polarization free energy of solvation -7.417 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.301 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.276 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.693 kcal (6) G-S(sol) free energy of system = (1) + (5) -191.577 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds