Wall clock time and date at job start Tue Mar 9 2021 18:04:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.52999 * 109.46668 * 2 1 4 4 C 1.52993 * 109.47234 * 240.00144 * 2 1 3 5 5 O 1.45196 * 109.46960 * 119.99443 * 2 1 3 6 6 C 1.34644 * 116.99505 * 60.01009 * 5 2 1 7 7 O 1.21507 * 120.00334 * 359.97438 * 6 5 2 8 8 N 1.34779 * 119.99420 * 179.97438 * 6 5 2 9 9 C 1.46507 * 119.99704 * 179.97438 * 8 6 5 10 10 H 1.09003 * 112.84587 * 23.80418 * 9 8 6 11 11 C 1.53776 * 113.61383 * 154.99961 * 9 8 6 12 12 C 1.53779 * 87.08039 * 139.98112 * 11 9 8 13 13 H 1.09007 * 113.61529 * 89.19903 * 12 11 9 14 14 C 1.53002 * 113.61382 * 220.01770 * 12 11 9 15 15 O 1.42901 * 109.47031 * 184.99913 * 14 12 11 16 16 C 1.35898 * 117.00115 * 179.97438 * 15 14 12 17 17 C 1.38704 * 120.06037 * 179.97438 * 16 15 14 18 18 N 1.48011 * 120.02646 * 359.95990 * 17 16 15 19 19 O 1.21796 * 120.00315 * 180.02562 * 18 17 16 20 20 O 1.21800 * 119.99484 * 0.02562 * 18 17 16 21 21 C 1.38164 * 119.94971 * 179.97438 * 17 16 15 22 22 C 1.38245 * 120.05134 * 359.97438 * 21 17 16 23 23 C 1.50705 * 119.94106 * 179.97438 * 22 21 17 24 24 O 1.42894 * 109.47171 * 300.00532 * 23 22 21 25 25 Si 1.86298 * 109.46780 * 179.97438 * 23 22 21 26 26 C 1.38286 * 120.11441 * 0.27580 * 22 21 17 27 27 C 1.38119 * 120.05312 * 359.45024 * 26 22 21 28 28 C 1.53777 * 113.61312 * 252.49690 * 9 8 6 29 29 H 1.08996 * 109.47355 * 299.99626 * 1 2 3 30 30 H 1.08997 * 109.46929 * 60.00641 * 1 2 3 31 31 H 1.08999 * 109.46654 * 179.97438 * 1 2 3 32 32 H 1.08999 * 109.47237 * 179.97438 * 3 2 1 33 33 H 1.08998 * 109.47325 * 300.00224 * 3 2 1 34 34 H 1.09008 * 109.47302 * 60.00187 * 3 2 1 35 35 H 1.08999 * 109.47238 * 299.99566 * 4 2 1 36 36 H 1.09002 * 109.47508 * 60.00088 * 4 2 1 37 37 H 1.08999 * 109.47057 * 179.97438 * 4 2 1 38 38 H 0.96996 * 120.00772 * 359.97438 * 8 6 5 39 39 H 1.08999 * 113.61672 * 25.43307 * 11 9 8 40 40 H 1.09004 * 113.68784 * 254.54199 * 11 9 8 41 41 H 1.08993 * 109.47191 * 64.99868 * 14 12 11 42 42 H 1.09000 * 109.46861 * 305.00125 * 14 12 11 43 43 H 1.08001 * 119.97324 * 180.02562 * 21 17 16 44 44 H 1.09004 * 109.46779 * 60.00855 * 23 22 21 45 45 H 0.96709 * 113.99337 * 180.02562 * 24 23 22 46 46 H 1.48506 * 109.99834 * 60.00830 * 25 23 22 47 47 H 1.48502 * 110.00011 * 181.32094 * 25 23 22 48 48 H 1.07996 * 119.97218 * 179.72356 * 26 22 21 49 49 H 1.08004 * 120.02943 * 180.27712 * 27 26 22 50 50 H 1.09003 * 113.61510 * 105.46856 * 28 9 8 51 51 H 1.09003 * 113.61491 * 334.56751 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9723 1.3383 7 8 0.9511 -2.5095 0.5039 8 7 2.0681 -2.6656 2.4167 9 6 1.6742 -4.0668 2.5832 10 1 1.4212 -4.5503 1.6396 11 6 2.6476 -4.8814 3.4512 12 6 1.4103 -5.5541 4.0688 13 1 1.0849 -6.4458 3.5328 14 6 1.5229 -5.7763 5.5784 15 8 0.3840 -6.5065 6.0386 16 6 0.3281 -6.7900 7.3665 17 6 -0.7493 -7.4954 7.8816 18 7 -1.8404 -7.9396 6.9856 19 8 -2.7865 -8.5586 7.4384 20 8 -1.7920 -7.6861 5.7952 21 6 -0.8035 -7.7828 9.2320 22 6 0.2153 -7.3683 10.0694 23 6 0.1534 -7.6826 11.5420 24 8 -1.0196 -7.0929 12.1060 25 14 1.6638 -6.9941 12.3879 26 6 1.2882 -6.6604 9.5592 27 6 1.3497 -6.3755 8.2091 28 6 0.6286 -4.2854 3.6894 29 1 -0.3634 0.5137 0.8900 30 1 -0.3633 0.5137 -0.8900 31 1 -0.3632 -1.0277 -0.0005 32 1 3.1300 1.4426 0.0005 33 1 1.6766 1.9564 -0.8899 34 1 1.6766 1.9564 0.8901 35 1 1.6768 -1.7489 -1.2492 36 1 1.6768 -0.2074 -2.1392 37 1 3.1301 -0.7208 -1.2494 38 1 2.6282 -2.2369 3.0826 39 1 3.2139 -4.2755 4.1585 40 1 3.2768 -5.5645 2.8804 41 1 1.5655 -4.8123 6.0853 42 1 2.4291 -6.3415 5.7959 43 1 -1.6421 -8.3323 9.6334 44 1 0.1201 -8.7632 11.6818 45 1 -1.1243 -7.2547 13.0537 46 1 1.7215 -5.5215 12.2048 47 1 1.6305 -7.3250 13.8352 48 1 2.0806 -6.3339 10.2163 49 1 2.1900 -5.8265 7.8104 50 1 -0.3732 -4.4870 3.3097 51 1 0.6428 -3.5164 4.4618 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_29190_15734236.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:04:36 Heat of formation + Delta-G solvation = -93.608627 kcal Electronic energy + Delta-G solvation = -35044.920900 eV Core-core repulsion = 30109.213237 eV Total energy + Delta-G solvation = -4935.707663 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.176 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -43.01415 -41.86972 -41.53590 -40.49870 -39.40104 -37.88057 -37.60205 -37.16230 -35.30852 -34.26871 -33.41160 -32.38254 -29.79332 -28.31680 -28.26947 -27.59273 -26.97142 -26.65980 -25.16474 -23.78232 -22.72357 -22.28963 -21.42502 -20.70205 -20.12509 -19.46227 -19.11344 -18.99407 -18.79217 -18.30638 -17.98018 -17.42499 -17.28925 -17.04503 -16.66874 -16.58763 -16.29847 -16.08455 -15.60525 -15.49800 -15.31060 -14.97127 -14.53837 -14.44059 -14.25483 -14.10366 -13.72235 -13.70995 -13.46997 -13.41187 -13.13420 -12.97828 -12.90143 -12.81955 -12.80945 -12.57044 -12.48392 -12.25182 -12.24521 -12.14748 -12.05853 -11.94895 -11.81162 -11.79097 -11.50218 -11.28093 -10.94251 -10.87088 -10.79345 -10.16079 -9.79741 -5.23257 -1.08763 -0.29175 0.39704 0.54596 1.00258 1.18741 1.35126 1.57999 1.71459 1.88946 1.98126 2.90357 3.06914 3.12224 3.17117 3.22779 3.29295 3.45212 3.55934 3.58910 3.60040 3.78954 3.79370 3.84698 3.93012 3.98410 3.98847 4.04820 4.11529 4.23458 4.34418 4.43469 4.49743 4.52634 4.54076 4.57609 4.64398 4.73114 4.77048 4.77885 4.79524 4.88385 4.94940 4.95553 4.99523 5.06270 5.10594 5.33568 5.38581 5.48937 5.52363 5.61361 5.82269 6.19321 6.41728 6.92306 7.43793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.366 6.366 6 C 0.650 3.350 7 O -0.564 6.564 8 N -0.702 5.702 9 C 0.141 3.859 10 H 0.124 0.876 11 C -0.135 4.135 12 C -0.105 4.105 13 H 0.115 0.885 14 C 0.062 3.938 15 O -0.274 6.274 16 C 0.204 3.796 17 C -0.081 4.081 18 N 0.034 4.966 19 O -0.178 6.178 20 O -0.131 6.131 21 C 0.010 3.990 22 C -0.113 4.113 23 C -0.073 4.073 24 O -0.535 6.535 25 Si 0.684 3.316 26 C -0.022 4.022 27 C -0.208 4.208 28 C -0.148 4.148 29 H 0.059 0.941 30 H 0.072 0.928 31 H 0.087 0.913 32 H 0.067 0.933 33 H 0.082 0.918 34 H 0.067 0.933 35 H 0.087 0.913 36 H 0.072 0.928 37 H 0.060 0.940 38 H 0.406 0.594 39 H 0.092 0.908 40 H 0.087 0.913 41 H 0.072 0.928 42 H 0.075 0.925 43 H 0.162 0.838 44 H 0.084 0.916 45 H 0.385 0.615 46 H -0.251 1.251 47 H -0.255 1.255 48 H 0.148 0.852 49 H 0.157 0.843 50 H 0.084 0.916 51 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.924 1.332 4.263 9.979 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.281 6.281 6 C 0.404 3.596 7 O -0.453 6.453 8 N -0.361 5.361 9 C 0.037 3.963 10 H 0.142 0.858 11 C -0.173 4.173 12 C -0.124 4.124 13 H 0.133 0.867 14 C -0.013 4.013 15 O -0.185 6.185 16 C 0.154 3.846 17 C -0.166 4.166 18 N 0.553 4.447 19 O -0.387 6.387 20 O -0.353 6.353 21 C -0.009 4.009 22 C -0.114 4.114 23 C -0.183 4.183 24 O -0.343 6.343 25 Si 0.583 3.417 26 C -0.040 4.040 27 C -0.227 4.227 28 C -0.186 4.186 29 H 0.079 0.921 30 H 0.091 0.909 31 H 0.106 0.894 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.086 0.914 35 H 0.106 0.894 36 H 0.091 0.909 37 H 0.079 0.921 38 H 0.241 0.759 39 H 0.110 0.890 40 H 0.106 0.894 41 H 0.090 0.910 42 H 0.094 0.906 43 H 0.179 0.821 44 H 0.102 0.898 45 H 0.234 0.766 46 H -0.176 1.176 47 H -0.179 1.179 48 H 0.165 0.835 49 H 0.174 0.826 50 H 0.103 0.897 51 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 9.153 2.047 4.057 10.219 hybrid contribution -0.946 0.196 0.931 1.341 sum 8.207 2.243 4.988 9.863 Atomic orbital electron populations 1.22523 0.93812 1.05109 1.02702 1.22117 0.94471 0.91538 0.81864 1.21879 1.02293 0.92389 1.03335 1.22521 1.01566 1.03480 0.96548 1.86304 1.71505 1.23505 1.46757 1.18173 0.78704 0.80640 0.82127 1.90924 1.40736 1.70374 1.43245 1.44738 1.55519 1.12127 1.23684 1.22506 0.95429 0.78928 0.99390 0.85810 1.23406 0.96385 0.98791 0.98750 1.22350 0.97877 0.99479 0.92729 0.86670 1.23126 0.87050 0.95689 0.95408 1.86441 1.44577 1.69263 1.18202 1.18664 0.91256 0.89911 0.84767 1.20546 0.91798 1.12763 0.91470 1.43284 1.01059 0.98793 1.01517 1.94560 1.24621 1.39503 1.79995 1.94602 1.84068 1.58719 0.97895 1.20778 0.98147 0.93419 0.88590 1.19121 0.95439 1.02357 0.94457 1.24758 0.98344 1.01817 0.93337 1.86586 1.41722 1.77794 1.28227 0.95243 0.82579 0.82310 0.81518 1.21201 0.96345 0.91482 0.94943 1.21255 1.00311 1.07439 0.93734 1.23627 0.99968 0.96552 0.98501 0.92147 0.90925 0.89375 0.91418 0.89920 0.91433 0.89403 0.90921 0.92140 0.75923 0.88977 0.89433 0.90964 0.90647 0.82091 0.89776 0.76599 1.17598 1.17930 0.83467 0.82565 0.89750 0.89440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.29 8.37 37.16 0.31 0.02 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.10 8.85 37.16 0.33 0.42 16 4 C -0.18 -0.25 8.37 37.15 0.31 0.06 16 5 O -0.37 -0.85 9.94 -40.34 -0.40 -1.25 16 6 C 0.65 1.70 8.06 54.06 0.44 2.14 16 7 O -0.56 -2.89 11.48 -19.28 -0.22 -3.11 16 8 N -0.70 0.49 5.36 -57.93 -0.31 0.18 16 9 C 0.14 -0.22 4.24 -67.12 -0.28 -0.50 16 10 H 0.12 0.01 7.46 -51.93 -0.39 -0.38 16 11 C -0.14 0.57 7.39 -25.92 -0.19 0.38 16 12 C -0.11 0.30 4.01 -89.81 -0.36 -0.06 16 13 H 0.12 -0.24 8.14 -51.93 -0.42 -0.66 16 14 C 0.06 -0.19 4.58 37.16 0.17 -0.02 16 15 O -0.27 -0.22 8.15 -41.54 -0.34 -0.56 16 16 C 0.20 0.14 6.67 -39.22 -0.26 -0.12 16 17 C -0.08 -0.23 6.87 -79.81 -0.55 -0.78 16 18 N 0.03 0.20 4.45 34.03 0.15 0.35 16 19 O -0.18 -1.21 18.45 -29.46 -0.54 -1.75 16 20 O -0.13 -0.89 17.24 -36.49 -0.63 -1.52 16 21 C 0.01 0.01 9.11 -39.61 -0.36 -0.35 16 22 C -0.11 0.10 5.42 -104.60 -0.57 -0.47 16 23 C -0.07 0.17 2.81 36.01 0.10 0.27 16 24 O -0.54 0.31 12.74 -35.23 -0.45 -0.13 16 25 Si 0.68 -2.35 29.78 -169.99 -5.06 -7.41 16 26 C -0.02 0.06 8.66 -39.61 -0.34 -0.29 16 27 C -0.21 0.51 9.04 -39.43 -0.36 0.15 16 28 C -0.15 0.23 7.43 -25.92 -0.19 0.04 16 29 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 30 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 31 H 0.09 0.33 5.88 -51.93 -0.31 0.03 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.07 -0.05 8.14 -51.92 -0.42 -0.47 16 35 H 0.09 0.30 5.88 -51.93 -0.31 0.00 16 36 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 37 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 38 H 0.41 -1.20 8.84 -40.82 -0.36 -1.56 16 39 H 0.09 -0.53 8.08 -51.93 -0.42 -0.95 16 40 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 41 H 0.07 -0.33 7.37 -51.93 -0.38 -0.71 16 42 H 0.08 -0.38 7.66 -51.93 -0.40 -0.78 16 43 H 0.16 0.16 7.61 -52.49 -0.40 -0.24 16 44 H 0.08 -0.33 7.96 -51.93 -0.41 -0.75 16 45 H 0.39 -1.72 8.74 45.56 0.40 -1.33 16 46 H -0.25 0.15 7.11 56.52 0.40 0.55 16 47 H -0.25 0.26 7.11 56.52 0.40 0.66 16 48 H 0.15 -0.78 4.87 -52.49 -0.26 -1.04 16 49 H 0.16 -0.87 6.30 -52.48 -0.33 -1.20 16 50 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 51 H 0.09 -0.17 7.90 -51.93 -0.41 -0.58 16 LS Contribution 418.80 15.07 6.31 6.31 Total: 0.00 -10.33 418.80 -10.80 -21.13 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -7.39 Total: -13.21 kcal Atomic # 6 Polarization: 2.89 SS G_CDS: -1.91 Total: 0.98 kcal Atomic # 7 Polarization: 0.69 SS G_CDS: -0.16 Total: 0.53 kcal Atomic # 8 Polarization: -5.75 SS G_CDS: -2.58 Total: -8.33 kcal Atomic # 14 Polarization: -2.35 SS G_CDS: -5.06 Total: -7.41 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -10.33 -10.80 -21.13 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_29190_15734236.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.480 kcal (2) G-P(sol) polarization free energy of solvation -10.330 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.810 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.798 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.129 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.609 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds