Wall clock time and date at job start Tue Mar 9 2021 18:04:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86300 * 109.46919 * 2 1 4 4 C 1.50696 * 109.47077 * 239.99673 * 2 1 3 5 5 C 1.38240 * 119.94377 * 120.00369 * 4 2 1 6 6 C 1.38165 * 120.05889 * 179.97438 * 5 4 2 7 7 C 1.38711 * 119.94205 * 0.02562 * 6 5 4 8 8 O 1.35901 * 120.05766 * 179.97438 * 7 6 5 9 9 C 1.42897 * 116.99503 * 0.02562 * 8 7 6 10 10 C 1.53007 * 109.47073 * 180.02562 * 9 8 7 11 11 H 1.08995 * 109.46931 * 54.99589 * 10 9 8 12 12 C 1.52995 * 109.47389 * 175.00287 * 10 9 8 13 13 C 1.53003 * 109.47046 * 180.02562 * 12 10 9 14 14 C 1.53001 * 109.46994 * 299.99951 * 13 12 10 15 15 H 1.09008 * 109.46700 * 300.00003 * 14 13 12 16 16 O 1.42898 * 109.47078 * 180.02562 * 14 13 12 17 17 C 1.52996 * 109.47512 * 59.99943 * 14 13 12 18 18 C 1.53001 * 109.46847 * 295.00358 * 10 9 8 19 19 C 1.38756 * 119.88834 * 359.97438 * 7 6 5 20 20 N 1.48007 * 120.02650 * 180.02562 * 19 7 6 21 21 O 1.21803 * 119.99745 * 180.02562 * 20 19 7 22 22 O 1.21799 * 120.00052 * 359.73074 * 20 19 7 23 23 C 1.38120 * 119.94548 * 0.27816 * 19 7 6 24 24 H 0.96700 * 113.99818 * 59.99993 * 1 2 3 25 25 H 1.09003 * 109.47006 * 119.99436 * 2 1 3 26 26 H 1.48496 * 110.00473 * 60.00093 * 3 2 1 27 27 H 1.48506 * 109.99834 * 181.31739 * 3 2 1 28 28 H 1.08004 * 119.97175 * 0.02562 * 5 4 2 29 29 H 1.07996 * 120.03052 * 179.97438 * 6 5 4 30 30 H 1.09001 * 109.47821 * 300.00083 * 9 8 7 31 31 H 1.08999 * 109.47393 * 60.00506 * 9 8 7 32 32 H 1.09001 * 109.46842 * 299.99518 * 12 10 9 33 33 H 1.08999 * 109.46979 * 59.99981 * 12 10 9 34 34 H 1.08991 * 109.47414 * 59.99813 * 13 12 10 35 35 H 1.09000 * 109.47109 * 179.97438 * 13 12 10 36 36 H 0.96699 * 113.99911 * 179.97438 * 16 14 13 37 37 H 1.08999 * 109.46661 * 59.99878 * 17 14 13 38 38 H 1.08993 * 109.47286 * 180.02562 * 17 14 13 39 39 H 1.08999 * 109.47257 * 299.99857 * 18 10 9 40 40 H 1.09000 * 109.47228 * 59.99700 * 18 10 9 41 41 H 1.07995 * 119.97576 * 179.70081 * 23 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7261 -0.0376 -2.1396 6 6 3.1884 -0.6868 -3.2682 7 6 2.8540 -2.0148 -3.4888 8 8 3.3070 -2.6555 -4.5984 9 6 4.1239 -1.9005 -5.4953 10 6 4.5345 -2.7824 -6.6764 11 1 3.6433 -3.1986 -7.1460 12 6 5.3038 -1.9419 -7.6973 13 6 5.7138 -2.8237 -8.8786 14 6 6.6057 -3.9623 -8.3796 15 1 7.4972 -3.5464 -7.9100 16 8 6.9890 -4.7855 -9.4829 17 6 5.8364 -4.8028 -7.3586 18 6 5.4266 -3.9206 -6.1769 19 6 2.0561 -2.6880 -2.5747 20 7 1.6979 -4.1051 -2.8068 21 8 0.9971 -4.6954 -2.0043 22 8 2.0994 -4.6795 -3.8030 23 6 1.5922 -2.0329 -1.4507 24 1 -0.3933 0.4417 -0.7651 25 1 1.7924 -0.5138 0.8901 26 1 1.5616 2.4680 1.2084 27 1 3.5347 1.7703 -0.0321 28 1 2.9866 0.9963 -1.9671 29 1 3.8089 -0.1606 -3.9784 30 1 3.5627 -1.0410 -5.8620 31 1 5.0156 -1.5556 -4.9718 32 1 4.6682 -1.1310 -8.0532 33 1 6.1950 -1.5257 -7.2276 34 1 4.8224 -3.2395 -9.3482 35 1 6.2615 -2.2247 -9.6062 36 1 7.5573 -5.5293 -9.2399 37 1 4.9450 -5.2186 -7.8282 38 1 6.4720 -5.6137 -7.0028 39 1 6.3178 -3.5045 -5.7072 40 1 4.8785 -4.5194 -5.4495 41 1 0.9672 -2.5550 -0.7414 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_29190_16737254.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:04:39 Heat of formation + Delta-G solvation = -104.110383 kcal Electronic energy + Delta-G solvation = -26100.849655 eV Core-core repulsion = 22143.633703 eV Total energy + Delta-G solvation = -3957.215953 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -43.06424 -41.65638 -40.38344 -39.44903 -37.62453 -37.25032 -36.71231 -33.52663 -32.51810 -31.92072 -31.63532 -27.68736 -27.38723 -26.40351 -24.00195 -23.90389 -22.83936 -22.21099 -21.05190 -20.29519 -19.50179 -19.14022 -18.37273 -18.31833 -18.22240 -17.46462 -17.33585 -16.53093 -16.48139 -16.28495 -15.81891 -15.55941 -15.35064 -15.03033 -14.79401 -14.48720 -14.10929 -13.92345 -13.70751 -13.51796 -13.31105 -13.10645 -12.77548 -12.40690 -12.29440 -12.28026 -12.18655 -12.11561 -11.95978 -11.84410 -11.74641 -11.72701 -11.20515 -10.92279 -10.77346 -10.75569 -9.85269 -5.30323 -1.14516 -0.34614 0.34358 0.49646 1.01543 1.36231 1.53998 1.75129 1.95228 2.99711 3.04984 3.12773 3.21080 3.29416 3.44881 3.51682 3.54568 3.63279 3.73815 3.87514 3.91614 4.05517 4.17335 4.19429 4.20251 4.22080 4.28708 4.32650 4.36445 4.44209 4.48150 4.67380 4.69407 4.83902 4.93654 4.95922 4.99380 5.06041 5.09957 5.25088 5.32828 5.47837 5.78689 6.32238 6.67970 6.86982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.065 4.065 3 Si 0.692 3.308 4 C -0.160 4.160 5 C -0.025 4.025 6 C -0.209 4.209 7 C 0.204 3.796 8 O -0.275 6.275 9 C 0.054 3.946 10 C -0.087 4.087 11 H 0.090 0.910 12 C -0.109 4.109 13 C -0.111 4.111 14 C 0.103 3.897 15 H 0.054 0.946 16 O -0.569 6.569 17 C -0.152 4.152 18 C -0.113 4.113 19 C -0.082 4.082 20 N 0.034 4.966 21 O -0.176 6.176 22 O -0.132 6.132 23 C 0.008 3.992 24 H 0.381 0.619 25 H 0.120 0.880 26 H -0.248 1.248 27 H -0.254 1.254 28 H 0.147 0.853 29 H 0.156 0.844 30 H 0.073 0.927 31 H 0.071 0.929 32 H 0.074 0.926 33 H 0.069 0.931 34 H 0.073 0.927 35 H 0.073 0.927 36 H 0.379 0.621 37 H 0.074 0.926 38 H 0.067 0.933 39 H 0.062 0.938 40 H 0.080 0.920 41 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.766 7.238 -1.369 7.868 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.175 4.175 3 Si 0.593 3.407 4 C -0.162 4.162 5 C -0.043 4.043 6 C -0.228 4.228 7 C 0.154 3.846 8 O -0.185 6.185 9 C -0.021 4.021 10 C -0.105 4.105 11 H 0.109 0.891 12 C -0.147 4.147 13 C -0.149 4.149 14 C 0.044 3.956 15 H 0.072 0.928 16 O -0.375 6.375 17 C -0.190 4.190 18 C -0.151 4.151 19 C -0.166 4.166 20 N 0.553 4.447 21 O -0.386 6.386 22 O -0.354 6.354 23 C -0.011 4.011 24 H 0.229 0.771 25 H 0.138 0.862 26 H -0.173 1.173 27 H -0.179 1.179 28 H 0.165 0.835 29 H 0.174 0.826 30 H 0.091 0.909 31 H 0.090 0.910 32 H 0.093 0.907 33 H 0.087 0.913 34 H 0.092 0.908 35 H 0.092 0.908 36 H 0.227 0.773 37 H 0.093 0.907 38 H 0.086 0.914 39 H 0.080 0.920 40 H 0.099 0.901 41 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 3.101 8.423 -0.645 8.999 hybrid contribution 0.450 -1.215 0.471 1.379 sum 3.550 7.208 -0.173 8.037 Atomic orbital electron populations 1.86558 1.16616 1.81610 1.49339 1.25080 0.85656 1.10215 0.96585 0.94876 0.80750 0.77076 0.88045 1.20287 1.02433 0.94061 0.99396 1.21277 0.91844 0.99770 0.91360 1.21299 1.06975 0.92888 1.01628 1.18684 0.89402 0.90667 0.85807 1.86423 1.63247 1.39283 1.29568 1.23224 0.93713 0.95014 0.90150 1.21239 0.99961 0.95863 0.93432 0.89132 1.21478 1.00201 0.97787 0.95196 1.21432 1.00069 0.95786 0.97609 1.21846 0.96223 0.90977 0.86561 0.92833 1.86514 1.71952 1.44125 1.34907 1.22275 1.01604 0.98607 0.96468 1.21546 0.99146 0.96533 0.97844 1.20583 1.11096 0.83742 1.01196 1.43296 0.98927 1.02358 1.00088 1.94569 1.35109 1.66798 1.42105 1.94599 1.55394 1.67901 1.17501 1.20813 0.93567 0.93545 0.93126 0.77140 0.86220 1.17271 1.17945 0.83541 0.82638 0.90859 0.91046 0.90716 0.91272 0.90800 0.90784 0.77318 0.90688 0.91443 0.91961 0.90137 0.81953 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.84 12.76 -35.23 -0.45 0.39 16 2 C -0.06 0.16 2.82 36.00 0.10 0.26 16 3 Si 0.69 -2.47 29.78 -169.99 -5.06 -7.53 16 4 C -0.16 0.32 5.39 -104.60 -0.56 -0.24 16 5 C -0.02 0.09 8.66 -39.61 -0.34 -0.26 16 6 C -0.21 0.60 9.04 -39.43 -0.36 0.24 16 7 C 0.20 0.05 6.67 -39.22 -0.26 -0.21 16 8 O -0.27 -0.17 7.69 -41.55 -0.32 -0.49 16 9 C 0.05 -0.15 4.12 37.16 0.15 0.01 16 10 C -0.09 0.18 2.43 -90.62 -0.22 -0.04 16 11 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 12 C -0.11 0.33 5.20 -26.73 -0.14 0.19 16 13 C -0.11 0.12 5.57 -26.73 -0.15 -0.03 16 14 C 0.10 -0.06 3.47 -26.73 -0.09 -0.16 16 15 H 0.05 -0.07 8.14 -51.92 -0.42 -0.49 16 16 O -0.57 -0.50 13.32 -35.23 -0.47 -0.97 16 17 C -0.15 0.13 5.55 -26.70 -0.15 -0.02 16 18 C -0.11 0.13 5.10 -26.70 -0.14 0.00 16 19 C -0.08 -0.18 6.87 -79.81 -0.55 -0.72 16 20 N 0.03 0.18 4.45 34.03 0.15 0.33 16 21 O -0.18 -1.13 18.45 -29.46 -0.54 -1.67 16 22 O -0.13 -0.84 17.24 -36.49 -0.63 -1.47 16 23 C 0.01 0.00 9.11 -39.60 -0.36 -0.36 16 24 H 0.38 -2.11 8.70 45.56 0.40 -1.71 16 25 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 26 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 27 H -0.25 0.42 7.11 56.52 0.40 0.82 16 28 H 0.15 -0.89 4.87 -52.48 -0.26 -1.14 16 29 H 0.16 -0.87 6.30 -52.49 -0.33 -1.20 16 30 H 0.07 -0.33 7.66 -51.93 -0.40 -0.73 16 31 H 0.07 -0.30 7.66 -51.93 -0.40 -0.70 16 32 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.38 -1.08 9.08 45.56 0.41 -0.67 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 38 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.08 0.05 7.82 -51.93 -0.41 -0.36 16 41 H 0.16 0.07 7.61 -52.49 -0.40 -0.33 16 LS Contribution 338.86 15.07 5.11 5.11 Total: 0.00 -8.60 338.86 -10.07 -18.67 By element: Atomic # 1 Polarization: -6.26 SS G_CDS: -4.79 Total: -11.05 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: -3.06 Total: -1.34 kcal Atomic # 7 Polarization: 0.18 SS G_CDS: 0.15 Total: 0.33 kcal Atomic # 8 Polarization: -1.78 SS G_CDS: -2.41 Total: -4.19 kcal Atomic # 14 Polarization: -2.47 SS G_CDS: -5.06 Total: -7.53 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -8.60 -10.07 -18.67 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_29190_16737254.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.436 kcal (2) G-P(sol) polarization free energy of solvation -8.601 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.037 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.073 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.674 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds