Wall clock time and date at job start Tue Mar 9 2021 18:16:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86309 * 109.46827 * 2 1 4 4 C 1.50709 * 109.47425 * 240.00420 * 2 1 3 5 5 C 1.38695 * 120.01617 * 285.27450 * 4 2 1 6 6 O 1.35921 * 120.05059 * 359.97438 * 5 4 2 7 7 C 1.42892 * 117.00534 * 180.25157 * 6 5 4 8 8 C 1.52999 * 109.47398 * 179.97438 * 7 6 5 9 9 H 1.09001 * 109.47190 * 179.97438 * 8 7 6 10 10 O 1.42970 * 109.47269 * 299.99962 * 8 7 6 11 11 C 1.43086 * 113.76903 * 178.79072 * 10 8 7 12 12 C 1.53262 * 108.94554 * 302.03231 * 11 10 8 13 13 H 1.08997 * 109.57273 * 294.71312 * 12 11 10 14 14 N 1.46499 * 109.57471 * 174.46136 * 12 11 10 15 15 C 1.34531 * 124.46035 * 299.69648 * 14 12 11 16 16 O 1.21440 * 125.70774 * 0.02562 * 15 14 12 17 17 C 1.47811 * 108.57986 * 179.90396 * 15 14 12 18 18 C 1.40954 * 105.88105 * 0.35256 * 17 15 14 19 19 C 1.38561 * 119.82155 * 179.82507 * 18 17 15 20 20 C 1.38609 * 119.72041 * 359.93372 * 19 18 17 21 21 C 1.38229 * 120.46135 * 0.06532 * 20 19 18 22 22 C 1.38567 * 134.29809 * 180.09550 * 17 15 14 23 23 C 1.34516 * 124.46162 * 120.00017 * 14 12 11 24 24 O 1.21450 * 125.71012 * 359.97438 * 23 14 12 25 25 C 1.53256 * 108.84266 * 54.52670 * 12 11 10 26 26 O 1.42964 * 109.47026 * 60.00146 * 8 7 6 27 27 C 1.38746 * 119.91105 * 180.24899 * 5 4 2 28 28 C 1.38126 * 119.95501 * 359.46835 * 27 5 4 29 29 C 1.38384 * 120.04585 * 0.26040 * 28 27 5 30 30 Cl 1.73597 * 119.95999 * 179.97438 * 29 28 27 31 31 C 1.38164 * 120.01993 * 104.99353 * 4 2 1 32 32 H 0.96701 * 114.00011 * 60.00040 * 1 2 3 33 33 H 1.08992 * 109.47559 * 119.99991 * 2 1 3 34 34 H 1.48501 * 110.00041 * 298.68316 * 3 2 1 35 35 H 1.48500 * 109.99479 * 60.00453 * 3 2 1 36 36 H 1.09005 * 109.47356 * 299.99928 * 7 6 5 37 37 H 1.09006 * 109.46827 * 59.99854 * 7 6 5 38 38 H 1.09005 * 109.55960 * 61.87485 * 11 10 8 39 39 H 1.08994 * 109.55650 * 182.08229 * 11 10 8 40 40 H 1.07995 * 120.14017 * 179.97438 * 19 18 17 41 41 H 1.08001 * 119.77133 * 180.02562 * 20 19 18 42 42 H 1.07998 * 119.77522 * 179.97438 * 21 20 19 43 43 H 1.07997 * 120.14298 * 0.30398 * 22 17 15 44 44 H 1.08996 * 109.56271 * 65.31336 * 25 12 11 45 45 H 1.08999 * 109.55697 * 185.52998 * 25 12 11 46 46 H 1.08002 * 120.02503 * 179.75181 * 27 5 4 47 47 H 1.07999 * 119.97818 * 180.27452 * 28 27 5 48 48 H 1.07999 * 119.98336 * 0.04557 * 31 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2306 5 6 1.8645 -2.0934 -1.3092 6 8 1.3463 -2.8096 -0.2768 7 6 1.3138 -4.2305 -0.4245 8 6 0.7023 -4.8598 0.8288 9 1 0.6771 -5.9437 0.7159 10 8 1.4940 -4.5173 1.9689 11 6 0.9867 -5.0385 3.2011 12 6 -0.4422 -4.5243 3.4081 13 1 -0.4256 -3.4424 3.5387 14 7 -1.0228 -5.1534 4.5969 15 6 -1.1959 -6.4788 4.7491 16 8 -0.8998 -7.3303 3.9355 17 6 -1.8041 -6.7253 6.0736 18 6 -1.9739 -5.4559 6.6623 19 6 -2.5333 -5.3516 7.9257 20 6 -2.9235 -6.4973 8.6012 21 6 -2.7570 -7.7422 8.0239 22 6 -2.1983 -7.8620 6.7610 23 6 -1.4584 -4.4814 5.6777 24 8 -1.4327 -3.2756 5.8206 25 6 -1.2797 -4.8800 2.1749 26 8 -0.6284 -4.3688 1.0078 27 6 2.3324 -2.7455 -2.4410 28 6 2.8538 -2.0157 -3.4914 29 6 2.9146 -0.6354 -3.4134 30 17 3.5709 0.2796 -4.7346 31 6 2.4537 0.0162 -2.2833 32 1 -0.3933 0.4417 -0.7651 33 1 1.7924 -0.5138 0.8899 34 1 1.5877 2.4587 -1.2242 35 1 1.5614 2.4678 1.2086 36 1 0.7105 -4.4917 -1.2940 37 1 2.3284 -4.6049 -0.5606 38 1 0.9804 -6.1278 3.1615 39 1 1.6184 -4.7071 4.0251 40 1 -2.6654 -4.3816 8.3818 41 1 -3.3600 -6.4169 9.5858 42 1 -3.0646 -8.6276 8.5604 43 1 -2.0703 -8.8372 6.3150 44 1 -1.3719 -5.9632 2.0963 45 1 -2.2706 -4.4352 2.2661 46 1 2.2848 -3.8227 -2.5025 47 1 3.2140 -2.5226 -4.3744 48 1 2.5025 1.0935 -2.2240 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_508404_13594088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:16:26 Heat of formation + Delta-G solvation = -122.588212 kcal Electronic energy + Delta-G solvation = -39732.628313 eV Core-core repulsion = 34326.772274 eV Total energy + Delta-G solvation = -5405.856039 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.095 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.67443 -41.64047 -41.01801 -39.81730 -39.62738 -38.78853 -37.80703 -37.10929 -36.95206 -36.94065 -34.56809 -32.90257 -32.37139 -31.92574 -30.76161 -29.59697 -27.39715 -26.78054 -26.34538 -25.60610 -24.63591 -23.56241 -23.09100 -22.61108 -22.25886 -21.01198 -19.58349 -19.04465 -19.00393 -18.73900 -18.26635 -17.80077 -17.57514 -17.52027 -17.10612 -16.97091 -16.72803 -16.54202 -16.31973 -16.08096 -16.05277 -15.76796 -15.68407 -15.60660 -15.24711 -15.17139 -15.16443 -14.74742 -14.66112 -14.53249 -14.25685 -14.04168 -13.98316 -13.63820 -13.54133 -13.39869 -12.94780 -12.87874 -12.67658 -12.56427 -12.30077 -12.22557 -12.09104 -11.73214 -11.69974 -11.65518 -11.60648 -11.54895 -10.86550 -10.75616 -10.45752 -10.44761 -10.42460 -10.16816 -9.13068 -4.90162 -1.16787 -0.26486 0.04788 0.16143 0.80656 0.92670 1.20003 1.34665 1.62450 1.67677 1.97639 2.02850 2.25786 2.32707 2.37541 2.38380 2.46011 3.06589 3.22357 3.32062 3.36119 3.43594 3.49200 3.60830 3.68471 3.68678 3.77144 3.80481 3.86002 3.95304 3.97552 4.03139 4.03448 4.06365 4.13532 4.15783 4.18078 4.33910 4.35302 4.50549 4.53593 4.58442 4.62317 4.68215 4.70571 4.88713 4.98646 4.99227 5.09046 5.14514 5.33242 5.39951 5.43086 5.52776 5.81809 5.98109 6.26236 6.42653 6.56090 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.518 6.518 2 C -0.060 4.060 3 Si 0.682 3.318 4 C -0.137 4.137 5 C 0.163 3.837 6 O -0.277 6.277 7 C 0.073 3.927 8 C 0.246 3.754 9 H 0.086 0.914 10 O -0.369 6.369 11 C 0.049 3.951 12 C 0.075 3.925 13 H 0.130 0.870 14 N -0.570 5.570 15 C 0.576 3.424 16 O -0.460 6.460 17 C -0.143 4.143 18 C -0.139 4.139 19 C -0.042 4.042 20 C -0.092 4.092 21 C -0.094 4.094 22 C -0.042 4.042 23 C 0.575 3.425 24 O -0.451 6.451 25 C 0.049 3.951 26 O -0.366 6.366 27 C -0.201 4.201 28 C -0.060 4.060 29 C -0.071 4.071 30 Cl -0.066 7.066 31 C -0.074 4.074 32 H 0.371 0.629 33 H 0.121 0.879 34 H -0.258 1.258 35 H -0.254 1.254 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.074 0.926 39 H 0.109 0.891 40 H 0.145 0.855 41 H 0.145 0.855 42 H 0.145 0.855 43 H 0.144 0.856 44 H 0.074 0.926 45 H 0.109 0.891 46 H 0.139 0.861 47 H 0.139 0.861 48 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.278 -5.758 3.762 6.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.323 6.323 2 C -0.170 4.170 3 Si 0.583 3.417 4 C -0.139 4.139 5 C 0.117 3.883 6 O -0.189 6.189 7 C -0.002 4.002 8 C 0.151 3.849 9 H 0.103 0.897 10 O -0.288 6.288 11 C -0.028 4.028 12 C -0.027 4.027 13 H 0.148 0.852 14 N -0.315 5.315 15 C 0.366 3.634 16 O -0.331 6.331 17 C -0.147 4.147 18 C -0.143 4.143 19 C -0.061 4.061 20 C -0.110 4.110 21 C -0.112 4.112 22 C -0.060 4.060 23 C 0.364 3.636 24 O -0.321 6.321 25 C -0.029 4.029 26 O -0.285 6.285 27 C -0.220 4.220 28 C -0.079 4.079 29 C -0.097 4.097 30 Cl -0.037 7.037 31 C -0.093 4.093 32 H 0.218 0.782 33 H 0.139 0.861 34 H -0.183 1.183 35 H -0.178 1.178 36 H 0.108 0.892 37 H 0.109 0.891 38 H 0.092 0.908 39 H 0.128 0.872 40 H 0.162 0.838 41 H 0.163 0.837 42 H 0.163 0.837 43 H 0.162 0.838 44 H 0.092 0.908 45 H 0.127 0.873 46 H 0.157 0.843 47 H 0.157 0.843 48 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -0.111 -4.590 3.775 5.944 hybrid contribution -1.064 -0.656 -0.671 1.419 sum -1.175 -5.246 3.104 6.208 Atomic orbital electron populations 1.86699 1.17295 1.79630 1.48724 1.24843 0.84144 1.10154 0.97866 0.95120 0.91582 0.74646 0.80322 1.19534 1.05221 0.91089 0.98007 1.18838 0.91776 0.90864 0.86863 1.86317 1.76393 1.18092 1.38107 1.22923 1.01602 0.79845 0.95866 1.23588 0.78829 0.96241 0.86288 0.89734 1.88249 1.49333 1.76595 1.14620 1.23008 0.92699 0.99315 0.87827 1.22648 0.94953 1.01276 0.83830 0.85191 1.46454 1.58029 1.08832 1.18219 1.18453 0.76769 0.81454 0.86755 1.90808 1.46913 1.47833 1.47561 1.20469 1.03876 0.95161 0.95145 1.20477 1.03781 0.93512 0.96539 1.20870 0.93623 1.00275 0.91321 1.21560 0.97328 0.91693 1.00431 1.21556 0.96612 0.98664 0.94346 1.20856 0.93953 0.97681 0.93538 1.18418 0.76300 0.87406 0.81447 1.90866 1.50411 1.13078 1.77738 1.23002 0.96503 1.00320 0.83056 1.88284 1.26977 1.70746 1.42512 1.21255 1.05792 1.00735 0.94253 1.20897 0.96619 0.91679 0.98690 1.20673 1.05420 0.92239 0.91411 1.98389 1.84602 1.74088 1.46637 1.20904 0.96723 1.00480 0.91164 0.78202 0.86106 1.18282 1.17835 0.89189 0.89104 0.90819 0.87244 0.83752 0.83693 0.83713 0.83811 0.90787 0.87313 0.84317 0.84315 0.83872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -1.79 12.88 -35.23 -0.45 -2.24 16 2 C -0.06 -0.11 2.37 36.01 0.09 -0.03 16 3 Si 0.68 0.33 30.25 -169.99 -5.14 -4.81 16 4 C -0.14 -0.23 5.27 -104.48 -0.55 -0.78 16 5 C 0.16 0.31 6.66 -39.22 -0.26 0.05 16 6 O -0.28 -0.77 9.26 -39.97 -0.37 -1.14 16 7 C 0.07 -0.01 4.83 37.16 0.18 0.17 16 8 C 0.25 0.24 3.59 37.16 0.13 0.37 16 9 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 10 O -0.37 -0.83 10.43 -63.56 -0.66 -1.49 16 11 C 0.05 0.05 6.33 37.29 0.24 0.29 16 12 C 0.07 0.11 3.07 -67.66 -0.21 -0.09 16 13 H 0.13 0.35 7.59 -51.93 -0.39 -0.04 16 14 N -0.57 -0.76 2.53 -110.23 -0.28 -1.04 16 15 C 0.58 0.72 7.35 -12.46 -0.09 0.63 16 16 O -0.46 -1.28 15.17 5.42 0.08 -1.19 16 17 C -0.14 0.02 6.40 -104.83 -0.67 -0.65 16 18 C -0.14 -0.02 6.41 -104.83 -0.67 -0.69 16 19 C -0.04 0.08 10.09 -39.33 -0.40 -0.32 16 20 C -0.09 0.34 10.04 -39.45 -0.40 -0.05 16 21 C -0.09 0.36 10.04 -39.44 -0.40 -0.04 16 22 C -0.04 0.09 10.09 -39.32 -0.40 -0.30 16 23 C 0.58 1.20 8.02 -12.46 -0.10 1.10 16 24 O -0.45 -2.16 17.44 5.41 0.09 -2.07 16 25 C 0.05 0.07 6.32 37.29 0.24 0.30 16 26 O -0.37 -1.01 10.43 -63.56 -0.66 -1.67 16 27 C -0.20 -0.02 9.04 -39.43 -0.36 -0.38 16 28 C -0.06 -0.01 9.82 -39.57 -0.39 -0.40 16 29 C -0.07 -0.09 6.32 -39.49 -0.25 -0.34 16 30 Cl -0.07 -0.10 28.95 -51.86 -1.50 -1.60 16 31 C -0.07 -0.08 8.44 -39.57 -0.33 -0.41 16 32 H 0.37 0.12 8.70 45.56 0.40 0.52 16 33 H 0.12 0.29 7.83 -51.93 -0.41 -0.12 16 34 H -0.26 -0.45 6.69 56.52 0.38 -0.07 16 35 H -0.25 -0.93 7.11 56.52 0.40 -0.53 16 36 H 0.09 -0.16 7.66 -51.93 -0.40 -0.56 16 37 H 0.09 -0.20 7.66 -51.93 -0.40 -0.60 16 38 H 0.07 0.06 6.72 -51.93 -0.35 -0.29 16 39 H 0.11 0.02 8.14 -51.93 -0.42 -0.40 16 40 H 0.14 -0.45 8.06 -52.49 -0.42 -0.87 16 41 H 0.15 -0.89 8.06 -52.49 -0.42 -1.31 16 42 H 0.15 -0.90 8.06 -52.49 -0.42 -1.33 16 43 H 0.14 -0.52 8.06 -52.49 -0.42 -0.95 16 44 H 0.07 0.08 6.65 -51.93 -0.35 -0.26 16 45 H 0.11 0.09 8.14 -51.93 -0.42 -0.33 16 46 H 0.14 -0.32 6.30 -52.49 -0.33 -0.65 16 47 H 0.14 -0.21 8.06 -52.49 -0.42 -0.63 16 48 H 0.14 0.02 4.86 -52.49 -0.26 -0.24 16 LS Contribution 420.33 15.07 6.33 6.33 Total: 0.00 -9.42 420.33 -12.24 -21.66 By element: Atomic # 1 Polarization: -4.09 SS G_CDS: -5.08 Total: -9.17 kcal Atomic # 6 Polarization: 3.03 SS G_CDS: -4.60 Total: -1.57 kcal Atomic # 7 Polarization: -0.76 SS G_CDS: -0.28 Total: -1.04 kcal Atomic # 8 Polarization: -7.83 SS G_CDS: -1.97 Total: -9.80 kcal Atomic # 14 Polarization: 0.33 SS G_CDS: -5.14 Total: -4.81 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -1.50 Total: -1.60 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -9.42 -12.24 -21.66 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_508404_13594088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.923 kcal (2) G-P(sol) polarization free energy of solvation -9.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.345 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.243 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.665 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.588 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds