Wall clock time and date at job start Tue Mar 9 2021 18:16:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86309 * 109.46827 * 2 1 4 4 C 1.50709 * 109.47425 * 240.00420 * 2 1 3 5 5 C 1.38695 * 120.01617 * 285.27450 * 4 2 1 6 6 O 1.35921 * 120.05059 * 359.97438 * 5 4 2 7 7 C 1.42892 * 117.00534 * 180.25157 * 6 5 4 8 8 C 1.52999 * 109.47398 * 179.97438 * 7 6 5 9 9 H 1.09001 * 109.47190 * 179.97438 * 8 7 6 10 10 O 1.42970 * 109.47269 * 299.99962 * 8 7 6 11 11 C 1.43086 * 113.76903 * 178.79072 * 10 8 7 12 12 C 1.53262 * 108.94554 * 302.03231 * 11 10 8 13 13 H 1.08997 * 109.57273 * 294.71312 * 12 11 10 14 14 N 1.46499 * 109.57471 * 174.46136 * 12 11 10 15 15 C 1.34531 * 124.46035 * 299.69648 * 14 12 11 16 16 O 1.21440 * 125.70774 * 0.02562 * 15 14 12 17 17 C 1.47811 * 108.57986 * 179.90396 * 15 14 12 18 18 C 1.40954 * 105.88105 * 0.35256 * 17 15 14 19 19 C 1.38561 * 119.82155 * 179.82507 * 18 17 15 20 20 C 1.38609 * 119.72041 * 359.93372 * 19 18 17 21 21 C 1.38229 * 120.46135 * 0.06532 * 20 19 18 22 22 C 1.38567 * 134.29809 * 180.09550 * 17 15 14 23 23 C 1.34516 * 124.46162 * 120.00017 * 14 12 11 24 24 O 1.21450 * 125.71012 * 359.97438 * 23 14 12 25 25 C 1.53256 * 108.84266 * 54.52670 * 12 11 10 26 26 O 1.42964 * 109.47026 * 60.00146 * 8 7 6 27 27 C 1.38746 * 119.91105 * 180.24899 * 5 4 2 28 28 C 1.38126 * 119.95501 * 359.46835 * 27 5 4 29 29 C 1.38384 * 120.04585 * 0.26040 * 28 27 5 30 30 Cl 1.73597 * 119.95999 * 179.97438 * 29 28 27 31 31 C 1.38164 * 120.01993 * 104.99353 * 4 2 1 32 32 H 0.96701 * 114.00011 * 60.00040 * 1 2 3 33 33 H 1.08992 * 109.47559 * 119.99991 * 2 1 3 34 34 H 1.48501 * 110.00041 * 298.68316 * 3 2 1 35 35 H 1.48500 * 109.99479 * 60.00453 * 3 2 1 36 36 H 1.09005 * 109.47356 * 299.99928 * 7 6 5 37 37 H 1.09006 * 109.46827 * 59.99854 * 7 6 5 38 38 H 1.09005 * 109.55960 * 61.87485 * 11 10 8 39 39 H 1.08994 * 109.55650 * 182.08229 * 11 10 8 40 40 H 1.07995 * 120.14017 * 179.97438 * 19 18 17 41 41 H 1.08001 * 119.77133 * 180.02562 * 20 19 18 42 42 H 1.07998 * 119.77522 * 179.97438 * 21 20 19 43 43 H 1.07997 * 120.14298 * 0.30398 * 22 17 15 44 44 H 1.08996 * 109.56271 * 65.31336 * 25 12 11 45 45 H 1.08999 * 109.55697 * 185.52998 * 25 12 11 46 46 H 1.08002 * 120.02503 * 179.75181 * 27 5 4 47 47 H 1.07999 * 119.97818 * 180.27452 * 28 27 5 48 48 H 1.07999 * 119.98336 * 0.04557 * 31 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2306 5 6 1.8645 -2.0934 -1.3092 6 8 1.3463 -2.8096 -0.2768 7 6 1.3138 -4.2305 -0.4245 8 6 0.7023 -4.8598 0.8288 9 1 0.6771 -5.9437 0.7159 10 8 1.4940 -4.5173 1.9689 11 6 0.9867 -5.0385 3.2011 12 6 -0.4422 -4.5243 3.4081 13 1 -0.4256 -3.4424 3.5387 14 7 -1.0228 -5.1534 4.5969 15 6 -1.1959 -6.4788 4.7491 16 8 -0.8998 -7.3303 3.9355 17 6 -1.8041 -6.7253 6.0736 18 6 -1.9739 -5.4559 6.6623 19 6 -2.5333 -5.3516 7.9257 20 6 -2.9235 -6.4973 8.6012 21 6 -2.7570 -7.7422 8.0239 22 6 -2.1983 -7.8620 6.7610 23 6 -1.4584 -4.4814 5.6777 24 8 -1.4327 -3.2756 5.8206 25 6 -1.2797 -4.8800 2.1749 26 8 -0.6284 -4.3688 1.0078 27 6 2.3324 -2.7455 -2.4410 28 6 2.8538 -2.0157 -3.4914 29 6 2.9146 -0.6354 -3.4134 30 17 3.5709 0.2796 -4.7346 31 6 2.4537 0.0162 -2.2833 32 1 -0.3933 0.4417 -0.7651 33 1 1.7924 -0.5138 0.8899 34 1 1.5877 2.4587 -1.2242 35 1 1.5614 2.4678 1.2086 36 1 0.7105 -4.4917 -1.2940 37 1 2.3284 -4.6049 -0.5606 38 1 0.9804 -6.1278 3.1615 39 1 1.6184 -4.7071 4.0251 40 1 -2.6654 -4.3816 8.3818 41 1 -3.3600 -6.4169 9.5858 42 1 -3.0646 -8.6276 8.5604 43 1 -2.0703 -8.8372 6.3150 44 1 -1.3719 -5.9632 2.0963 45 1 -2.2706 -4.4352 2.2661 46 1 2.2848 -3.8227 -2.5025 47 1 3.2140 -2.5226 -4.3744 48 1 2.5025 1.0935 -2.2240 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_508404_13594088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:16:25 Heat of formation + Delta-G solvation = -120.738624 kcal Electronic energy + Delta-G solvation = -39732.548109 eV Core-core repulsion = 34326.772274 eV Total energy + Delta-G solvation = -5405.775835 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.095 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -43.73803 -41.69978 -41.09305 -39.98647 -39.52730 -38.86317 -37.96603 -37.26110 -37.09733 -37.04163 -34.57871 -32.96494 -32.18664 -31.90269 -30.78839 -29.62453 -27.52394 -26.89075 -26.38086 -25.57990 -24.63753 -23.51541 -23.11951 -22.67946 -22.27893 -21.04040 -19.64025 -19.15405 -19.00578 -18.84218 -18.36123 -17.82660 -17.68696 -17.53490 -17.18585 -17.04026 -16.80175 -16.60346 -16.39595 -16.18067 -15.98774 -15.85508 -15.77396 -15.51274 -15.36142 -15.26353 -15.09140 -14.82742 -14.80084 -14.63222 -14.30986 -14.18824 -13.82912 -13.69642 -13.49374 -13.30433 -12.96856 -12.80069 -12.71024 -12.66102 -12.40820 -12.31284 -12.25736 -11.87045 -11.74115 -11.72808 -11.69026 -11.65688 -10.98025 -10.88630 -10.60097 -10.28191 -10.26857 -10.20493 -9.19769 -4.99472 -1.14206 -0.08343 0.01459 0.09981 0.84532 0.85973 1.13002 1.23393 1.50442 1.58606 1.87866 1.98366 2.18111 2.28205 2.41280 2.41941 2.54968 3.04075 3.12541 3.19725 3.36648 3.43965 3.51172 3.55266 3.64763 3.67854 3.80920 3.88651 3.94929 4.01175 4.02146 4.07962 4.12665 4.13286 4.14217 4.19101 4.24919 4.29347 4.39127 4.42847 4.49474 4.51645 4.64910 4.78374 4.85543 4.91790 5.07997 5.10484 5.16270 5.22988 5.31434 5.37052 5.46734 5.63370 5.72354 5.89064 6.24430 6.31269 6.48603 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.071 4.071 3 Si 0.764 3.236 4 C -0.147 4.147 5 C 0.149 3.851 6 O -0.302 6.302 7 C 0.067 3.933 8 C 0.237 3.763 9 H 0.108 0.892 10 O -0.383 6.383 11 C 0.054 3.946 12 C 0.076 3.924 13 H 0.110 0.890 14 N -0.569 5.569 15 C 0.577 3.423 16 O -0.479 6.479 17 C -0.159 4.159 18 C -0.160 4.160 19 C -0.045 4.045 20 C -0.083 4.083 21 C -0.083 4.083 22 C -0.041 4.041 23 C 0.574 3.426 24 O -0.491 6.491 25 C 0.053 3.947 26 O -0.385 6.385 27 C -0.196 4.196 28 C -0.060 4.060 29 C -0.080 4.080 30 Cl -0.070 7.070 31 C -0.077 4.077 32 H 0.382 0.618 33 H 0.109 0.891 34 H -0.269 1.269 35 H -0.300 1.300 36 H 0.108 0.892 37 H 0.114 0.886 38 H 0.077 0.923 39 H 0.112 0.888 40 H 0.152 0.848 41 H 0.176 0.824 42 H 0.178 0.822 43 H 0.158 0.842 44 H 0.078 0.922 45 H 0.107 0.893 46 H 0.165 0.835 47 H 0.158 0.842 48 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.410 -7.828 4.211 8.898 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.179 4.179 3 Si 0.669 3.331 4 C -0.148 4.148 5 C 0.102 3.898 6 O -0.215 6.215 7 C -0.008 4.008 8 C 0.142 3.858 9 H 0.125 0.875 10 O -0.303 6.303 11 C -0.024 4.024 12 C -0.026 4.026 13 H 0.128 0.872 14 N -0.314 5.314 15 C 0.368 3.632 16 O -0.352 6.352 17 C -0.162 4.162 18 C -0.163 4.163 19 C -0.064 4.064 20 C -0.101 4.101 21 C -0.101 4.101 22 C -0.060 4.060 23 C 0.365 3.635 24 O -0.364 6.364 25 C -0.024 4.024 26 O -0.304 6.304 27 C -0.215 4.215 28 C -0.078 4.078 29 C -0.106 4.106 30 Cl -0.041 7.041 31 C -0.095 4.095 32 H 0.231 0.769 33 H 0.127 0.873 34 H -0.195 1.195 35 H -0.227 1.227 36 H 0.126 0.874 37 H 0.131 0.869 38 H 0.096 0.904 39 H 0.130 0.870 40 H 0.170 0.830 41 H 0.194 0.806 42 H 0.195 0.805 43 H 0.175 0.825 44 H 0.096 0.904 45 H 0.125 0.875 46 H 0.182 0.818 47 H 0.176 0.824 48 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -0.238 -6.697 4.203 7.910 hybrid contribution -1.086 -0.090 -0.725 1.309 sum -1.324 -6.787 3.478 7.740 Atomic orbital electron populations 1.86655 1.18412 1.80219 1.49672 1.25046 0.83504 1.11569 0.97812 0.94162 0.90236 0.71790 0.76958 1.19527 1.05864 0.91438 0.97990 1.19057 0.92277 0.91045 0.87393 1.86285 1.76739 1.19563 1.38888 1.23206 1.03160 0.78609 0.95831 1.23979 0.77972 0.97575 0.86274 0.87534 1.88225 1.49816 1.77020 1.15227 1.22983 0.92264 0.99345 0.87774 1.22546 0.95598 1.00232 0.84207 0.87169 1.46476 1.57811 1.09127 1.17986 1.18722 0.76249 0.80947 0.87256 1.90784 1.47964 1.48085 1.48354 1.20451 1.05380 0.95910 0.94489 1.20422 1.05816 0.92730 0.97366 1.21158 0.93006 1.01659 0.90561 1.21958 0.95962 0.90892 1.01294 1.21981 0.94800 0.99840 0.93454 1.21177 0.93233 0.97483 0.94076 1.18845 0.75485 0.87254 0.81892 1.90831 1.52357 1.14647 1.78563 1.22962 0.96352 1.00361 0.82753 1.88255 1.28003 1.71383 1.42804 1.21510 1.04665 1.02009 0.93275 1.21156 0.96011 0.91348 0.99303 1.20808 1.05741 0.92787 0.91307 1.98386 1.84673 1.74287 1.46763 1.20936 0.96718 1.00783 0.91063 0.76944 0.87336 1.19484 1.22748 0.87433 0.86870 0.90443 0.86969 0.83039 0.80633 0.80480 0.82461 0.90400 0.87474 0.81799 0.82432 0.83276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -4.93 12.88 -148.98 -1.92 -6.85 16 2 C -0.07 -0.40 2.37 71.24 0.17 -0.23 16 3 Si 0.76 1.71 30.25 68.60 2.07 3.79 16 4 C -0.15 -0.64 5.27 -19.77 -0.10 -0.75 16 5 C 0.15 0.64 6.66 22.50 0.15 0.79 16 6 O -0.30 -1.99 9.26 -73.08 -0.68 -2.66 16 7 C 0.07 -0.02 4.83 71.98 0.35 0.33 16 8 C 0.24 0.64 3.59 71.98 0.26 0.90 16 9 H 0.11 -0.24 8.14 -2.39 -0.02 -0.26 16 10 O -0.38 -2.30 10.43 -121.89 -1.27 -3.57 16 11 C 0.05 0.21 6.33 72.07 0.46 0.67 16 12 C 0.08 0.44 3.07 45.17 0.14 0.58 16 13 H 0.11 1.04 7.59 -2.39 -0.02 1.03 16 14 N -0.57 -2.89 2.53 -739.58 -1.87 -4.76 16 15 C 0.58 2.32 7.35 86.81 0.64 2.96 16 16 O -0.48 -3.23 15.17 -3.53 -0.05 -3.28 16 17 C -0.16 -0.03 6.40 -20.00 -0.13 -0.16 16 18 C -0.16 -0.21 6.41 -20.00 -0.13 -0.34 16 19 C -0.05 0.19 10.09 22.44 0.23 0.41 16 20 C -0.08 0.81 10.04 22.36 0.22 1.03 16 21 C -0.08 0.85 10.04 22.36 0.22 1.08 16 22 C -0.04 0.23 10.09 22.44 0.23 0.46 16 23 C 0.57 3.89 8.02 86.82 0.70 4.59 16 24 O -0.49 -6.35 17.44 -3.56 -0.06 -6.42 16 25 C 0.05 0.26 6.32 72.07 0.46 0.72 16 26 O -0.39 -2.78 10.43 -121.89 -1.27 -4.05 16 27 C -0.20 0.12 9.04 22.36 0.20 0.32 16 28 C -0.06 0.03 9.82 22.28 0.22 0.25 16 29 C -0.08 -0.17 6.32 22.33 0.14 -0.03 16 30 Cl -0.07 -0.19 28.95 -2.72 -0.08 -0.27 16 31 C -0.08 -0.19 8.44 22.28 0.19 -0.01 16 32 H 0.38 0.96 8.70 -74.06 -0.64 0.32 16 33 H 0.11 0.82 7.83 -2.39 -0.02 0.80 16 34 H -0.27 -1.06 6.69 99.48 0.67 -0.39 16 35 H -0.30 -2.93 7.11 99.48 0.71 -2.22 16 36 H 0.11 -0.47 7.66 -2.38 -0.02 -0.49 16 37 H 0.11 -0.61 7.66 -2.38 -0.02 -0.62 16 38 H 0.08 0.24 6.72 -2.38 -0.02 0.23 16 39 H 0.11 0.31 8.14 -2.39 -0.02 0.29 16 40 H 0.15 -0.93 8.06 -2.91 -0.02 -0.96 16 41 H 0.18 -2.77 8.06 -2.91 -0.02 -2.80 16 42 H 0.18 -2.93 8.06 -2.91 -0.02 -2.96 16 43 H 0.16 -1.37 8.06 -2.91 -0.02 -1.39 16 44 H 0.08 0.31 6.65 -2.39 -0.02 0.29 16 45 H 0.11 0.47 8.14 -2.39 -0.02 0.45 16 46 H 0.16 -1.06 6.30 -2.91 -0.02 -1.08 16 47 H 0.16 -0.73 8.06 -2.91 -0.02 -0.75 16 48 H 0.15 0.08 4.86 -2.91 -0.01 0.07 16 Total: 0.00 -24.83 420.33 -0.12 -24.95 By element: Atomic # 1 Polarization: -10.86 SS G_CDS: 0.41 Total: -10.44 kcal Atomic # 6 Polarization: 8.97 SS G_CDS: 4.60 Total: 13.57 kcal Atomic # 7 Polarization: -2.89 SS G_CDS: -1.87 Total: -4.76 kcal Atomic # 8 Polarization: -21.58 SS G_CDS: -5.25 Total: -26.83 kcal Atomic # 14 Polarization: 1.71 SS G_CDS: 2.07 Total: 3.79 kcal Atomic # 17 Polarization: -0.19 SS G_CDS: -0.08 Total: -0.27 kcal Total: -24.83 -0.12 -24.95 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_508404_13594088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.791 kcal (2) G-P(sol) polarization free energy of solvation -24.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.622 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.116 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.948 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.739 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds