Wall clock time and date at job start Tue Mar 9 2021 18:16:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.52998 * 109.46789 * 2 1 4 4 C 1.53000 * 109.46896 * 240.00252 * 2 1 3 5 5 Si 1.86300 * 109.47114 * 120.00159 * 2 1 3 6 6 C 1.86298 * 109.47067 * 300.00059 * 5 2 1 7 7 C 1.86299 * 109.47021 * 179.97438 * 5 2 1 8 8 O 1.63099 * 109.47022 * 60.00436 * 5 2 1 9 9 C 1.42900 * 113.99844 * 180.02562 * 8 5 2 10 10 O 1.42907 * 109.47083 * 179.97438 * 9 8 5 11 11 C 1.35917 * 116.99980 * 74.99513 * 10 9 8 12 12 C 1.38698 * 120.04650 * 0.02562 * 11 10 9 13 13 C 1.38162 * 119.95830 * 179.97438 * 12 11 10 14 14 C 1.38347 * 120.04376 * 0.02562 * 13 12 11 15 15 Cl 1.73592 * 119.95958 * 180.02562 * 14 13 12 16 16 C 1.38385 * 120.08324 * 359.72200 * 14 13 12 17 17 C 1.38128 * 120.04137 * 0.55707 * 16 14 13 18 18 C 1.50701 * 120.02180 * 179.72204 * 17 16 14 19 19 O 1.42895 * 109.47079 * 254.72821 * 18 17 16 20 20 Si 1.86301 * 109.47149 * 14.72316 * 18 17 16 21 21 H 1.48506 * 109.47302 * 59.99966 * 20 18 17 22 22 H 1.48503 * 109.47334 * 300.00099 * 20 18 17 23 23 H 1.48500 * 109.47376 * 180.02562 * 20 18 17 24 24 H 1.08994 * 109.46736 * 299.99668 * 1 2 3 25 25 H 1.09001 * 109.47050 * 60.00046 * 1 2 3 26 26 H 1.08999 * 109.46882 * 179.97438 * 1 2 3 27 27 H 1.09004 * 109.46571 * 179.97438 * 3 2 1 28 28 H 1.08996 * 109.47568 * 300.00206 * 3 2 1 29 29 H 1.09004 * 109.47224 * 60.00717 * 3 2 1 30 30 H 1.08999 * 109.47351 * 299.99708 * 4 2 1 31 31 H 1.08996 * 109.47049 * 60.00046 * 4 2 1 32 32 H 1.09001 * 109.46799 * 179.97438 * 4 2 1 33 33 H 1.09004 * 109.46566 * 180.02562 * 6 5 2 34 34 H 1.08998 * 109.47213 * 299.99585 * 6 5 2 35 35 H 1.09001 * 109.47105 * 60.00437 * 6 5 2 36 36 H 1.09005 * 109.47444 * 300.00395 * 7 5 2 37 37 H 1.08999 * 109.46895 * 60.00138 * 7 5 2 38 38 H 1.08996 * 109.47141 * 180.02562 * 7 5 2 39 39 H 1.09000 * 109.47404 * 59.99550 * 9 8 5 40 40 H 1.08999 * 109.46555 * 299.99269 * 9 8 5 41 41 H 1.08003 * 120.01766 * 359.97438 * 12 11 10 42 42 H 1.07999 * 119.98283 * 180.02562 * 13 12 11 43 43 H 1.07999 * 119.97984 * 180.27588 * 16 14 13 44 44 H 1.09001 * 109.47380 * 134.72218 * 18 17 16 45 45 H 0.96708 * 113.99763 * 299.99687 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 14 2.1511 -0.8783 1.5211 6 6 1.5301 -0.0001 3.0422 7 6 4.0141 -0.8789 1.5207 8 8 1.6075 -2.4160 1.5210 9 6 2.0287 -3.1814 2.6518 10 8 1.5003 -4.5056 2.5543 11 6 2.0882 -5.3401 1.6569 12 6 3.1518 -4.8936 0.8867 13 6 3.7485 -5.7435 -0.0246 14 6 3.2853 -7.0391 -0.1696 15 17 4.0370 -8.1053 -1.3148 16 6 2.2276 -7.4880 0.6015 17 6 1.6248 -6.6395 1.5096 18 6 0.4689 -7.1270 2.3447 19 8 -0.7482 -6.5691 1.8453 20 14 0.3810 -8.9859 2.2587 21 1 1.6459 -9.5658 2.7776 22 1 0.1852 -9.4075 0.8483 23 1 -0.7583 -9.4663 3.0811 24 1 -0.3632 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.1300 1.4425 0.0005 28 1 1.6766 1.9564 -0.8899 29 1 1.6767 1.9563 0.8901 30 1 1.6767 -1.7489 -1.2493 31 1 1.6767 -0.2073 -2.1392 32 1 3.1300 -0.7208 -1.2495 33 1 1.8938 -0.5138 3.9322 34 1 1.8934 1.0275 3.0423 35 1 0.4400 -0.0002 3.0423 36 1 4.3771 -1.3930 0.6306 37 1 4.3777 0.1486 1.5205 38 1 4.3774 -1.3932 2.4104 39 1 1.6639 -2.7114 3.5651 40 1 3.1175 -3.2252 2.6756 41 1 3.5134 -3.8821 0.9994 42 1 4.5770 -5.3964 -0.6241 43 1 1.8703 -8.5011 0.4901 44 1 0.6126 -6.8176 3.3800 45 1 -0.7730 -5.6024 1.8603 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_508404_14468166.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:16:29 Heat of formation + Delta-G solvation = -157.976041 kcal Electronic energy + Delta-G solvation = -25433.146482 eV Core-core repulsion = 21792.830801 eV Total energy + Delta-G solvation = -3640.315681 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 332.117 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.66994 -39.33504 -37.79991 -37.15183 -36.96374 -36.81098 -32.85066 -30.98045 -29.69415 -29.27577 -27.98965 -27.53090 -27.30441 -26.74037 -23.47930 -22.72953 -20.59438 -19.60617 -18.59203 -18.32144 -18.08330 -17.13234 -16.70051 -16.11479 -16.01635 -15.69248 -15.35875 -15.24400 -14.99885 -14.87811 -14.67251 -14.37845 -14.20450 -14.08556 -13.79398 -13.63673 -13.59481 -13.45583 -13.34830 -13.06851 -13.05357 -12.97686 -12.52200 -12.20151 -12.15420 -12.04682 -12.02206 -11.86566 -11.74072 -11.72380 -11.68197 -11.16380 -10.98669 -10.65674 -10.24080 -10.13464 -9.24669 0.03923 0.08398 1.04525 1.17737 1.24722 1.47758 1.55331 1.60248 1.79702 1.93732 2.02882 2.28746 2.44521 3.43254 3.51803 3.61462 3.79544 3.93115 3.99466 4.00005 4.01847 4.07476 4.25841 4.33713 4.43136 4.45385 4.47699 4.51303 4.53782 4.63890 4.69649 4.74879 4.82400 4.89089 4.95753 4.99690 5.00289 5.04895 5.10844 5.12064 5.22127 5.28026 5.35768 5.37995 5.38277 5.43941 6.06212 6.66110 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.372 4.372 3 C -0.138 4.138 4 C -0.135 4.135 5 Si 1.294 2.706 6 C -0.513 4.513 7 C -0.516 4.516 8 O -0.644 6.644 9 C 0.247 3.753 10 O -0.295 6.295 11 C 0.148 3.852 12 C -0.180 4.180 13 C -0.068 4.068 14 C -0.062 4.062 15 Cl -0.064 7.064 16 C -0.078 4.078 17 C -0.131 4.131 18 C -0.082 4.082 19 O -0.536 6.536 20 Si 1.007 2.993 21 H -0.246 1.246 22 H -0.250 1.250 23 H -0.253 1.253 24 H 0.055 0.945 25 H 0.055 0.945 26 H 0.060 0.940 27 H 0.056 0.944 28 H 0.058 0.942 29 H 0.057 0.943 30 H 0.060 0.940 31 H 0.055 0.945 32 H 0.054 0.946 33 H 0.067 0.933 34 H 0.078 0.922 35 H 0.076 0.924 36 H 0.075 0.925 37 H 0.080 0.920 38 H 0.067 0.933 39 H 0.113 0.887 40 H 0.065 0.935 41 H 0.141 0.859 42 H 0.140 0.860 43 H 0.141 0.859 44 H 0.080 0.920 45 H 0.372 0.628 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.112 3.429 2.561 4.773 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.192 4.192 2 C -0.416 4.416 3 C -0.195 4.195 4 C -0.192 4.192 5 Si 1.426 2.574 6 C -0.616 4.616 7 C -0.618 4.618 8 O -0.605 6.605 9 C 0.134 3.866 10 O -0.209 6.209 11 C 0.103 3.897 12 C -0.199 4.199 13 C -0.086 4.086 14 C -0.089 4.089 15 Cl -0.036 7.036 16 C -0.097 4.097 17 C -0.132 4.132 18 C -0.190 4.190 19 O -0.342 6.342 20 Si 0.827 3.173 21 H -0.169 1.169 22 H -0.174 1.174 23 H -0.176 1.176 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.079 0.921 27 H 0.075 0.925 28 H 0.077 0.923 29 H 0.076 0.924 30 H 0.079 0.921 31 H 0.074 0.926 32 H 0.073 0.927 33 H 0.086 0.914 34 H 0.097 0.903 35 H 0.095 0.905 36 H 0.094 0.906 37 H 0.099 0.901 38 H 0.086 0.914 39 H 0.130 0.870 40 H 0.083 0.917 41 H 0.158 0.842 42 H 0.157 0.843 43 H 0.159 0.841 44 H 0.098 0.902 45 H 0.220 0.780 Dipole moment (debyes) X Y Z Total from point charges 1.671 1.597 2.332 3.284 hybrid contribution 0.748 1.901 -0.096 2.045 sum 2.419 3.498 2.236 4.805 Atomic orbital electron populations 1.21522 0.93615 1.02139 1.01947 1.25758 1.00853 1.02624 1.12375 1.21566 1.00780 0.94802 1.02335 1.21523 1.00555 1.00299 0.96843 0.76546 0.62921 0.52283 0.65640 1.27039 1.07411 1.09841 1.17272 1.27080 1.24736 1.05415 1.04572 1.85330 1.79920 1.46610 1.48593 1.23473 0.96412 0.78266 0.88401 1.86230 1.58611 1.21589 1.54509 1.18761 0.91635 0.89537 0.89763 1.21238 0.98160 1.01193 0.99287 1.20907 0.99288 0.91202 0.97247 1.20722 0.98446 0.92574 0.97178 1.98390 1.81244 1.64972 1.58952 1.20857 0.94482 1.00238 0.94076 1.19580 1.00481 0.92056 1.01105 1.25197 0.83424 1.12580 0.97799 1.86687 1.34653 1.25880 1.86945 0.84563 0.80907 0.70513 0.81337 1.16948 1.17351 1.17641 0.92629 0.92638 0.92083 0.92480 0.92310 0.92446 0.92142 0.92610 0.92697 0.91400 0.90290 0.90475 0.90636 0.90104 0.91393 0.86980 0.91748 0.84156 0.84250 0.84121 0.90177 0.78005 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.11 7.85 37.16 0.29 0.40 16 2 C -0.37 0.56 0.53 -90.62 -0.05 0.51 16 3 C -0.14 0.24 7.85 37.16 0.29 0.53 16 4 C -0.14 0.12 7.85 37.16 0.29 0.41 16 5 Si 1.29 -3.77 8.45 -169.99 -1.44 -5.20 16 6 C -0.51 1.35 8.50 101.05 0.86 2.21 16 7 C -0.52 1.49 8.50 101.05 0.86 2.35 16 8 O -0.64 0.93 8.04 -59.04 -0.47 0.45 16 9 C 0.25 -0.57 5.42 101.05 0.55 -0.02 16 10 O -0.30 0.00 9.30 -43.29 -0.40 -0.40 16 11 C 0.15 0.15 6.56 -39.22 -0.26 -0.11 16 12 C -0.18 -0.03 8.78 -39.44 -0.35 -0.37 16 13 C -0.07 -0.03 9.82 -39.57 -0.39 -0.42 16 14 C -0.06 -0.10 6.32 -39.49 -0.25 -0.35 16 15 Cl -0.06 -0.12 28.95 -51.86 -1.50 -1.62 16 16 C -0.08 -0.14 8.44 -39.57 -0.33 -0.48 16 17 C -0.13 -0.21 5.28 -104.48 -0.55 -0.76 16 18 C -0.08 -0.08 2.33 36.01 0.08 0.00 16 19 O -0.54 -1.12 12.65 -35.23 -0.45 -1.57 16 20 Si 1.01 0.88 25.74 -169.99 -4.37 -3.49 16 21 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 22 H -0.25 -0.40 6.74 56.52 0.38 -0.02 16 23 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 24 H 0.05 -0.08 7.79 -51.93 -0.40 -0.49 16 25 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 26 H 0.06 -0.02 7.97 -51.93 -0.41 -0.43 16 27 H 0.06 -0.14 7.79 -51.93 -0.40 -0.54 16 28 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.06 -0.14 7.79 -51.93 -0.40 -0.54 16 30 H 0.06 -0.02 7.97 -51.93 -0.41 -0.43 16 31 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.05 -0.09 7.79 -51.93 -0.40 -0.50 16 33 H 0.07 -0.23 7.48 -51.93 -0.39 -0.62 16 34 H 0.08 -0.21 7.79 -51.93 -0.40 -0.62 16 35 H 0.08 -0.17 7.79 -51.93 -0.40 -0.57 16 36 H 0.07 -0.20 7.79 -51.93 -0.40 -0.61 16 37 H 0.08 -0.24 7.79 -51.93 -0.40 -0.64 16 38 H 0.07 -0.24 7.48 -51.93 -0.39 -0.63 16 39 H 0.11 -0.53 7.21 -51.93 -0.37 -0.90 16 40 H 0.07 -0.27 5.77 -51.93 -0.30 -0.57 16 41 H 0.14 -0.25 5.86 -52.48 -0.31 -0.56 16 42 H 0.14 -0.18 8.06 -52.49 -0.42 -0.61 16 43 H 0.14 0.15 4.89 -52.49 -0.26 -0.10 16 44 H 0.08 -0.03 7.83 -51.93 -0.41 -0.44 16 45 H 0.37 0.05 8.61 45.56 0.39 0.45 16 LS Contribution 373.97 15.07 5.64 5.64 Total: 0.00 -4.19 373.97 -8.55 -12.74 By element: Atomic # 1 Polarization: -3.86 SS G_CDS: -6.60 Total: -10.46 kcal Atomic # 6 Polarization: 2.86 SS G_CDS: 1.05 Total: 3.91 kcal Atomic # 8 Polarization: -0.20 SS G_CDS: -1.32 Total: -1.52 kcal Atomic # 14 Polarization: -2.88 SS G_CDS: -5.81 Total: -8.69 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -1.50 Total: -1.62 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -4.19 -8.55 -12.74 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_508404_14468166.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.234 kcal (2) G-P(sol) polarization free energy of solvation -4.190 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.425 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.552 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.742 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.976 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds