Wall clock time and date at job start Tue Mar 9 2021 18:16:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86299 * 109.47344 * 2 1 4 4 C 1.50704 * 109.47257 * 239.99921 * 2 1 3 5 5 C 1.38118 * 120.02170 * 104.97771 * 4 2 1 6 6 C 1.38391 * 120.04491 * 180.02562 * 5 4 2 7 7 Cl 1.73599 * 119.95783 * 179.97438 * 6 5 4 8 8 C 1.38348 * 120.08312 * 0.02562 * 6 5 4 9 9 C 1.38167 * 120.03968 * 359.71621 * 8 6 5 10 10 C 1.38695 * 119.95988 * 0.56184 * 9 8 6 11 11 O 1.35925 * 120.04633 * 179.71826 * 10 9 8 12 12 C 1.42901 * 116.99615 * 359.72219 * 11 10 9 13 13 C 1.52998 * 109.47046 * 180.02562 * 12 11 10 14 14 H 1.09000 * 109.46903 * 305.00059 * 13 12 11 15 15 C 1.52997 * 109.47449 * 64.99681 * 13 12 11 16 16 C 1.52998 * 109.47449 * 179.97438 * 15 13 12 17 17 C 1.52999 * 109.47067 * 300.00474 * 16 15 13 18 18 H 1.09000 * 109.47181 * 299.99734 * 17 16 15 19 19 O 1.42902 * 109.47124 * 180.02562 * 17 16 15 20 20 C 1.52997 * 109.47373 * 59.99480 * 17 16 15 21 21 C 1.52998 * 109.47449 * 300.00286 * 20 17 16 22 22 H 0.96699 * 114.00518 * 179.97438 * 1 2 3 23 23 H 1.08999 * 109.47013 * 120.00291 * 2 1 3 24 24 H 1.48508 * 109.99726 * 179.97438 * 3 2 1 25 25 H 1.48498 * 110.00092 * 301.31733 * 3 2 1 26 26 H 1.07996 * 119.97849 * 0.04602 * 5 4 2 27 27 H 1.08001 * 119.97608 * 179.97438 * 8 6 5 28 28 H 1.07999 * 120.01878 * 180.30262 * 9 8 6 29 29 H 1.08999 * 109.47144 * 300.00200 * 12 11 10 30 30 H 1.08998 * 109.47043 * 59.99798 * 12 11 10 31 31 H 1.08999 * 109.47516 * 300.00723 * 15 13 12 32 32 H 1.09000 * 109.46760 * 60.00290 * 15 13 12 33 33 H 1.08996 * 109.47008 * 180.02562 * 16 15 13 34 34 H 1.09000 * 109.46903 * 60.00378 * 16 15 13 35 35 H 0.96699 * 114.00051 * 59.99429 * 19 17 16 36 36 H 1.08999 * 109.47516 * 179.97438 * 20 17 16 37 37 H 1.09003 * 109.46559 * 60.00492 * 20 17 16 38 38 H 1.09000 * 109.46903 * 299.99622 * 21 20 17 39 39 H 1.08996 * 109.47008 * 179.97438 * 21 20 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4531 0.0158 -2.2831 6 6 2.9140 -0.6361 -3.4135 7 17 3.5688 0.2790 -4.7355 8 6 2.8528 -2.0160 -3.4917 9 6 2.3364 -2.7462 -2.4386 10 6 1.8686 -2.0944 -1.3073 11 8 1.3550 -2.8107 -0.2725 12 6 1.3222 -4.2317 -0.4204 13 6 0.7151 -4.8611 0.8350 14 1 1.2691 -4.5282 1.7126 15 6 -0.7483 -4.4336 0.9633 16 6 -1.3556 -5.0636 2.2183 17 6 -1.2770 -6.5879 2.1129 18 1 -1.8309 -6.9205 1.2350 19 8 -1.8447 -7.1764 3.2849 20 6 0.1864 -7.0155 1.9846 21 6 0.7937 -6.3855 0.7295 22 1 -0.3934 -0.8834 -0.0004 23 1 1.7923 -0.5139 0.8900 24 1 3.5350 1.7700 0.0006 25 1 1.5355 2.4771 -1.1921 26 1 2.5016 1.0930 -2.2239 27 1 3.2127 -2.5229 -4.3749 28 1 2.2933 -3.8237 -2.4980 29 1 0.7152 -4.4928 -1.2873 30 1 2.3362 -4.6059 -0.5610 31 1 -0.8044 -3.3476 1.0379 32 1 -1.3024 -4.7665 0.0856 33 1 -2.3983 -4.7593 2.3095 34 1 -0.8017 -4.7310 3.0962 35 1 -2.7731 -6.9478 3.4295 36 1 0.2425 -8.1015 1.9099 37 1 0.7403 -6.6830 2.8625 38 1 0.2397 -6.7180 -0.1483 39 1 1.8364 -6.6898 0.6384 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_508404_16737254.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:16:43 Heat of formation + Delta-G solvation = -114.422576 kcal Electronic energy + Delta-G solvation = -22446.641106 eV Core-core repulsion = 18960.194626 eV Total energy + Delta-G solvation = -3486.446480 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.101 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -41.72702 -40.17663 -38.89292 -37.89681 -37.18820 -36.63393 -33.05263 -32.10611 -31.80651 -30.66857 -26.94393 -26.80865 -23.89740 -23.73268 -22.82187 -22.04721 -20.85646 -19.45343 -18.44533 -18.20488 -17.73973 -17.26516 -17.07562 -16.42824 -16.06248 -15.69621 -15.49206 -15.42936 -14.93648 -14.85533 -14.52359 -14.26596 -13.99016 -13.80643 -13.41382 -13.35667 -13.18775 -12.95343 -12.81181 -12.38825 -12.33133 -12.21069 -12.10753 -11.81761 -11.64473 -11.53912 -11.30504 -11.10759 -11.07991 -10.70447 -10.32361 -9.33334 -4.89170 -0.13160 -0.06290 0.96997 1.30176 1.58261 1.88168 1.93261 2.27621 3.22797 3.34386 3.45057 3.64698 3.68857 3.76119 3.79667 3.87099 3.95790 4.08069 4.08683 4.17801 4.27688 4.32545 4.36232 4.37084 4.49603 4.50410 4.51987 4.59295 4.81435 4.82503 4.92972 4.96026 4.99959 5.06995 5.10544 5.16320 5.19490 5.25902 5.35498 5.45034 6.14786 6.58719 6.85934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.075 4.075 3 Si 0.801 3.199 4 C -0.148 4.148 5 C -0.093 4.093 6 C -0.081 4.081 7 Cl -0.072 7.072 8 C -0.064 4.064 9 C -0.188 4.188 10 C 0.149 3.851 11 O -0.311 6.311 12 C 0.056 3.944 13 C -0.082 4.082 14 H 0.076 0.924 15 C -0.108 4.108 16 C -0.147 4.147 17 C 0.099 3.901 18 H 0.062 0.938 19 O -0.592 6.592 20 C -0.114 4.114 21 C -0.104 4.104 22 H 0.374 0.626 23 H 0.089 0.911 24 H -0.268 1.268 25 H -0.288 1.288 26 H 0.129 0.871 27 H 0.159 0.841 28 H 0.169 0.831 29 H 0.081 0.919 30 H 0.078 0.922 31 H 0.071 0.929 32 H 0.071 0.929 33 H 0.073 0.927 34 H 0.060 0.940 35 H 0.393 0.607 36 H 0.067 0.933 37 H 0.060 0.940 38 H 0.079 0.921 39 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.166 -3.530 1.065 3.867 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.184 4.184 3 Si 0.703 3.297 4 C -0.150 4.150 5 C -0.111 4.111 6 C -0.108 4.108 7 Cl -0.043 7.043 8 C -0.083 4.083 9 C -0.207 4.207 10 C 0.103 3.897 11 O -0.224 6.224 12 C -0.018 4.018 13 C -0.101 4.101 14 H 0.094 0.906 15 C -0.146 4.146 16 C -0.185 4.185 17 C 0.041 3.959 18 H 0.080 0.920 19 O -0.401 6.401 20 C -0.152 4.152 21 C -0.141 4.141 22 H 0.223 0.777 23 H 0.107 0.893 24 H -0.194 1.194 25 H -0.215 1.215 26 H 0.146 0.854 27 H 0.177 0.823 28 H 0.186 0.814 29 H 0.099 0.901 30 H 0.096 0.904 31 H 0.090 0.910 32 H 0.090 0.910 33 H 0.092 0.908 34 H 0.079 0.921 35 H 0.242 0.758 36 H 0.086 0.914 37 H 0.079 0.921 38 H 0.098 0.902 39 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -0.043 -2.420 0.784 2.544 hybrid contribution -0.395 -1.206 -1.090 1.673 sum -0.439 -3.626 -0.306 3.665 Atomic orbital electron populations 1.86693 1.17076 1.34101 1.97095 1.25217 0.84729 1.13520 0.94912 0.92473 0.76497 0.75040 0.85710 1.19755 1.05341 0.91704 0.98161 1.20819 0.98226 0.99783 0.92278 1.20874 1.05703 0.93131 0.91084 1.98382 1.84736 1.74463 1.46750 1.21190 0.96397 0.90903 0.99788 1.21568 1.03856 1.02150 0.93116 1.18846 0.92916 0.90247 0.87718 1.86042 1.76818 1.21222 1.38335 1.23178 1.02237 0.76426 0.99955 1.21172 0.96817 0.95228 0.96844 0.90554 1.21500 0.94438 1.00948 0.97716 1.22213 1.01909 0.95454 0.98920 1.21939 0.94694 0.91934 0.87343 0.92015 1.86481 1.32007 1.75018 1.46554 1.21465 0.94071 1.00954 0.98680 1.21432 1.02281 0.92614 0.97788 0.77719 0.89307 1.19366 1.21501 0.85358 0.82311 0.81369 0.90112 0.90366 0.91044 0.91029 0.90835 0.92124 0.75759 0.91392 0.92112 0.90203 0.89952 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.74 12.65 -148.98 -1.89 -3.62 16 2 C -0.08 -0.17 2.33 71.24 0.17 -0.01 16 3 Si 0.80 1.43 30.40 68.60 2.09 3.52 16 4 C -0.15 -0.62 5.28 -19.77 -0.10 -0.72 16 5 C -0.09 -0.58 8.44 22.28 0.19 -0.40 16 6 C -0.08 -0.40 6.32 22.33 0.14 -0.25 16 7 Cl -0.07 -0.40 28.95 -2.72 -0.08 -0.48 16 8 C -0.06 -0.02 9.82 22.28 0.22 0.19 16 9 C -0.19 0.33 9.04 22.36 0.20 0.53 16 10 C 0.15 0.13 6.62 22.50 0.15 0.28 16 11 O -0.31 0.60 8.58 -92.70 -0.79 -0.20 16 12 C 0.06 -0.38 4.12 71.98 0.30 -0.09 16 13 C -0.08 0.52 2.43 -10.80 -0.03 0.49 16 14 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 15 C -0.11 0.62 5.10 30.59 0.16 0.78 16 16 C -0.15 0.59 5.55 30.59 0.17 0.76 16 17 C 0.10 -0.24 3.47 30.59 0.11 -0.13 16 18 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 19 O -0.59 -0.63 13.32 -148.98 -1.98 -2.61 16 20 C -0.11 0.29 5.57 30.59 0.17 0.47 16 21 C -0.10 0.73 5.20 30.59 0.16 0.89 16 22 H 0.37 -0.45 8.60 -74.06 -0.64 -1.08 16 23 H 0.09 -0.01 7.83 -2.39 -0.02 -0.02 16 24 H -0.27 -1.31 7.11 99.48 0.71 -0.60 16 25 H -0.29 -2.25 6.81 99.48 0.68 -1.57 16 26 H 0.13 0.93 4.93 -2.91 -0.01 0.92 16 27 H 0.16 -0.61 8.06 -2.91 -0.02 -0.63 16 28 H 0.17 -1.31 6.30 -2.91 -0.02 -1.33 16 29 H 0.08 -0.73 7.67 -2.39 -0.02 -0.75 16 30 H 0.08 -0.67 7.65 -2.39 -0.02 -0.69 16 31 H 0.07 -0.34 7.82 -2.39 -0.02 -0.35 16 32 H 0.07 -0.48 8.14 -2.39 -0.02 -0.50 16 33 H 0.07 -0.38 8.14 -2.39 -0.02 -0.40 16 34 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 35 H 0.39 -2.57 9.08 -74.06 -0.67 -3.24 16 36 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 37 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 38 H 0.08 -0.69 8.14 -2.39 -0.02 -0.71 16 39 H 0.08 -0.68 8.14 -2.39 -0.02 -0.70 16 Total: 0.00 -12.22 328.32 -0.90 -13.11 By element: Atomic # 1 Polarization: -12.29 SS G_CDS: -0.23 Total: -12.52 kcal Atomic # 6 Polarization: 0.80 SS G_CDS: 1.99 Total: 2.79 kcal Atomic # 8 Polarization: -1.76 SS G_CDS: -4.66 Total: -6.43 kcal Atomic # 14 Polarization: 1.43 SS G_CDS: 2.09 Total: 3.52 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -0.08 Total: -0.48 kcal Total: -12.22 -0.90 -13.11 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_508404_16737254.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.308 kcal (2) G-P(sol) polarization free energy of solvation -12.219 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.527 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.895 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.114 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.423 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds