Wall clock time and date at job start Tue Mar 9 2021 18:21:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86298 * 109.47373 * 2 1 4 4 C 1.86299 * 109.47235 * 239.99583 * 2 1 3 5 5 C 1.86306 * 109.46768 * 119.99788 * 2 1 3 6 6 O 1.42895 * 109.47313 * 66.20004 * 5 2 1 7 7 C 1.35922 * 117.00174 * 77.74375 * 6 5 2 8 8 C 1.38703 * 120.03972 * 6.18593 * 7 6 5 9 9 C 1.38166 * 119.95386 * 179.97438 * 8 7 6 10 10 C 1.38349 * 120.04355 * 359.97438 * 9 8 7 11 11 Cl 1.73603 * 119.95616 * 180.02562 * 10 9 8 12 12 C 1.38383 * 120.08343 * 359.73592 * 10 9 8 13 13 C 1.38122 * 120.04684 * 0.54600 * 12 10 9 14 14 C 1.50693 * 120.02593 * 179.72624 * 13 12 10 15 15 O 1.42898 * 109.47137 * 254.72178 * 14 13 12 16 16 Si 1.86296 * 109.47281 * 14.72541 * 14 13 12 17 17 H 1.48496 * 109.47113 * 59.99900 * 16 14 13 18 18 H 1.48506 * 109.46834 * 300.00071 * 16 14 13 19 19 H 1.48501 * 109.47418 * 180.02562 * 16 14 13 20 20 H 1.08995 * 109.47237 * 300.00149 * 1 2 3 21 21 H 1.09000 * 109.46653 * 60.00614 * 1 2 3 22 22 H 1.08996 * 109.46912 * 180.02562 * 1 2 3 23 23 H 1.08990 * 109.47463 * 179.97438 * 3 2 1 24 24 H 1.09004 * 109.46798 * 300.00092 * 3 2 1 25 25 H 1.09005 * 109.47012 * 59.99206 * 3 2 1 26 26 H 1.09002 * 109.46973 * 294.73641 * 4 2 1 27 27 H 1.08998 * 109.47184 * 54.73948 * 4 2 1 28 28 H 1.08999 * 109.46935 * 174.74017 * 4 2 1 29 29 H 1.09000 * 109.47026 * 306.19618 * 5 2 1 30 30 H 1.09005 * 109.46997 * 186.20235 * 5 2 1 31 31 H 1.07992 * 120.02161 * 359.97438 * 8 7 6 32 32 H 1.07996 * 119.97619 * 180.02562 * 9 8 7 33 33 H 1.08003 * 119.98035 * 180.27047 * 12 10 9 34 34 H 1.09003 * 109.47296 * 134.72264 * 14 13 12 35 35 H 0.96699 * 114.00488 * 300.00460 * 15 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4841 -0.8783 -1.5211 5 6 2.4839 -0.8782 1.5213 6 8 2.1301 -2.2609 1.4509 7 6 2.8848 -3.0506 0.6420 8 6 4.0193 -2.5364 0.0318 9 6 4.7855 -3.3409 -0.7897 10 6 4.4220 -4.6586 -1.0032 11 17 5.3868 -5.6676 -2.0353 12 6 3.2939 -5.1750 -0.3905 13 6 2.5221 -4.3724 0.4268 14 6 1.2901 -4.9335 1.0889 15 8 0.1254 -4.4387 0.4252 16 14 1.3215 -6.7933 0.9845 17 1 2.5319 -7.3075 1.6742 18 1 1.3500 -7.2086 -0.4410 19 1 0.1072 -7.3463 1.6364 20 1 -0.3633 0.5138 0.8899 21 1 -0.3632 0.5137 -0.8901 22 1 -0.3633 -1.0276 0.0005 23 1 3.5740 1.7564 0.0005 24 1 2.1207 2.2702 -0.8900 25 1 2.1206 2.2703 0.8900 26 1 2.1997 -1.9296 -1.4751 27 1 2.0459 -0.4219 -2.4086 28 1 3.5700 -0.7974 -1.5694 29 1 2.0328 -0.4324 2.4077 30 1 3.5683 -0.7831 1.5785 31 1 4.3036 -1.5080 0.1986 32 1 5.6691 -2.9411 -1.2647 33 1 3.0141 -6.2052 -0.5549 34 1 1.2692 -4.6287 2.1352 35 1 0.0436 -3.4753 0.4401 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_508404_3095236.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:21:23 Heat of formation + Delta-G solvation = -80.377432 kcal Electronic energy + Delta-G solvation = -17890.251816 eV Core-core repulsion = 15038.596112 eV Total energy + Delta-G solvation = -2851.655704 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 274.070 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -41.59521 -38.78451 -37.80860 -37.02829 -33.01636 -31.10594 -29.62446 -28.35880 -28.26810 -27.75098 -26.79052 -23.33461 -22.70952 -19.35454 -18.36019 -17.69502 -17.16528 -16.77057 -16.34913 -15.61910 -15.42828 -14.92912 -14.68222 -14.24194 -14.04697 -13.87431 -13.77838 -13.50145 -13.41349 -13.33956 -13.20252 -13.08782 -12.94772 -12.49256 -12.29958 -12.14095 -12.04444 -11.87515 -11.21928 -11.07244 -10.83055 -10.76071 -10.60657 -10.09122 -9.01452 0.03376 0.08636 1.11447 1.16231 1.45495 1.47827 1.59007 1.77657 1.86573 1.91013 2.39336 2.43568 2.60450 3.47158 3.63582 3.88834 3.98648 4.06824 4.25368 4.27296 4.48575 4.64944 4.75265 4.79263 4.80462 4.83603 4.85163 4.85809 4.90228 4.96966 5.08611 5.12687 5.41768 5.56742 5.65194 5.65973 6.25760 6.65165 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.465 4.465 2 Si 1.063 2.937 3 C -0.460 4.460 4 C -0.469 4.469 5 C -0.265 4.265 6 O -0.296 6.296 7 C 0.141 3.859 8 C -0.185 4.185 9 C -0.068 4.068 10 C -0.079 4.079 11 Cl -0.075 7.075 12 C -0.092 4.092 13 C -0.149 4.149 14 C -0.081 4.081 15 O -0.548 6.548 16 Si 1.020 2.980 17 H -0.242 1.242 18 H -0.263 1.263 19 H -0.266 1.266 20 H 0.073 0.927 21 H 0.067 0.933 22 H 0.068 0.932 23 H 0.076 0.924 24 H 0.071 0.929 25 H 0.075 0.925 26 H 0.059 0.941 27 H 0.068 0.932 28 H 0.079 0.921 29 H 0.126 0.874 30 H 0.087 0.913 31 H 0.169 0.831 32 H 0.156 0.844 33 H 0.138 0.862 34 H 0.091 0.909 35 H 0.377 0.623 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.180 5.063 1.820 5.509 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.572 4.572 2 Si 1.255 2.745 3 C -0.568 4.568 4 C -0.575 4.575 5 C -0.384 4.384 6 O -0.209 6.209 7 C 0.094 3.906 8 C -0.204 4.204 9 C -0.086 4.086 10 C -0.106 4.106 11 Cl -0.047 7.047 12 C -0.110 4.110 13 C -0.150 4.150 14 C -0.189 4.189 15 O -0.356 6.356 16 Si 0.841 3.159 17 H -0.165 1.165 18 H -0.188 1.188 19 H -0.191 1.191 20 H 0.092 0.908 21 H 0.086 0.914 22 H 0.088 0.912 23 H 0.095 0.905 24 H 0.090 0.910 25 H 0.094 0.906 26 H 0.078 0.922 27 H 0.087 0.913 28 H 0.098 0.902 29 H 0.144 0.856 30 H 0.105 0.895 31 H 0.186 0.814 32 H 0.173 0.827 33 H 0.155 0.845 34 H 0.109 0.891 35 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges 1.026 3.392 1.746 3.951 hybrid contribution 0.326 1.058 -0.164 1.119 sum 1.351 4.450 1.582 4.912 Atomic orbital electron populations 1.26281 1.21653 1.04611 1.04620 0.78721 0.66413 0.65565 0.63835 1.26194 1.06886 1.18671 1.05028 1.26706 1.06898 1.07716 1.16197 1.28573 1.07174 0.83342 1.19294 1.86000 1.52851 1.20969 1.61085 1.18898 0.90701 0.90288 0.90664 1.21529 0.95542 1.02509 1.00804 1.21119 0.99979 0.90836 0.96690 1.20825 0.96079 0.93348 1.00369 1.98379 1.70790 1.69028 1.66457 1.20922 0.93720 1.00524 0.95843 1.19574 0.99897 0.92720 1.02833 1.25145 0.83172 1.12405 0.98209 1.86674 1.41953 1.27743 1.79185 0.84388 0.80292 0.71002 0.80175 1.16461 1.18776 1.19111 0.90814 0.91357 0.91239 0.90451 0.90990 0.90601 0.92194 0.91307 0.90206 0.85608 0.89460 0.81376 0.82673 0.84487 0.89075 0.77324 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.46 2.37 8.65 113.37 0.98 3.35 16 2 Si 1.06 -9.33 11.68 68.60 0.80 -8.53 16 3 C -0.46 3.60 8.65 113.37 0.98 4.58 16 4 C -0.47 2.16 7.03 113.37 0.80 2.96 16 5 C -0.26 2.01 5.31 113.37 0.60 2.61 16 6 O -0.30 0.59 8.70 -92.67 -0.81 -0.22 16 7 C 0.14 0.03 5.09 22.50 0.11 0.15 16 8 C -0.19 0.44 5.61 22.36 0.13 0.56 16 9 C -0.07 0.03 9.82 22.28 0.22 0.25 16 10 C -0.08 -0.27 6.32 22.33 0.14 -0.13 16 11 Cl -0.08 -0.32 28.95 -2.72 -0.08 -0.40 16 12 C -0.09 -0.39 8.44 22.28 0.19 -0.20 16 13 C -0.15 -0.45 5.28 -19.77 -0.10 -0.55 16 14 C -0.08 -0.19 2.33 71.23 0.17 -0.03 16 15 O -0.55 -2.05 12.65 -148.98 -1.89 -3.94 16 16 Si 1.02 3.13 25.74 68.60 1.77 4.89 16 17 H -0.24 -0.48 7.11 99.48 0.71 0.23 16 18 H -0.26 -1.31 6.74 99.48 0.67 -0.64 16 19 H -0.27 -1.33 7.11 99.48 0.71 -0.63 16 20 H 0.07 -0.41 7.96 -2.39 -0.02 -0.43 16 21 H 0.07 -0.29 7.96 -2.39 -0.02 -0.30 16 22 H 0.07 -0.29 7.96 -2.39 -0.02 -0.31 16 23 H 0.08 -0.67 7.96 -2.39 -0.02 -0.69 16 24 H 0.07 -0.47 7.96 -2.39 -0.02 -0.49 16 25 H 0.07 -0.61 7.96 -2.38 -0.02 -0.63 16 26 H 0.06 -0.07 6.25 -2.39 -0.01 -0.09 16 27 H 0.07 -0.26 7.96 -2.39 -0.02 -0.28 16 28 H 0.08 -0.49 6.54 -2.39 -0.02 -0.50 16 29 H 0.13 -1.26 7.96 -2.39 -0.02 -1.28 16 30 H 0.09 -0.86 6.08 -2.38 -0.01 -0.88 16 31 H 0.17 -1.39 4.74 -2.91 -0.01 -1.40 16 32 H 0.16 -0.68 8.06 -2.91 -0.02 -0.70 16 33 H 0.14 0.51 4.89 -2.91 -0.01 0.49 16 34 H 0.09 -0.01 7.83 -2.39 -0.02 -0.03 16 35 H 0.38 -0.50 8.61 -74.06 -0.64 -1.13 16 Total: 0.00 -9.52 297.90 5.19 -4.33 By element: Atomic # 1 Polarization: -10.86 SS G_CDS: 1.18 Total: -9.68 kcal Atomic # 6 Polarization: 9.34 SS G_CDS: 4.21 Total: 13.55 kcal Atomic # 8 Polarization: -1.46 SS G_CDS: -2.69 Total: -4.15 kcal Atomic # 14 Polarization: -6.21 SS G_CDS: 2.57 Total: -3.64 kcal Atomic # 17 Polarization: -0.32 SS G_CDS: -0.08 Total: -0.40 kcal Total: -9.52 5.19 -4.33 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_508404_3095236.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.047 kcal (2) G-P(sol) polarization free energy of solvation -9.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.564 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -4.330 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.377 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds