Wall clock time and date at job start Tue Mar 9 2021 18:24:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42900 * 109.47362 * 2 1 4 4 C 1.35986 * 117.00043 * 180.02562 * 3 2 1 5 5 C 1.38673 * 119.99827 * 179.72979 * 4 3 2 6 6 C 1.38155 * 119.99969 * 179.74027 * 5 4 3 7 7 C 1.50697 * 120.00219 * 180.22993 * 6 5 4 8 8 O 1.42901 * 109.46917 * 255.27463 * 7 6 5 9 9 Si 1.86299 * 109.47229 * 15.27233 * 7 6 5 10 10 C 1.38679 * 119.99633 * 0.50118 * 6 5 4 11 11 O 1.35986 * 119.99916 * 179.74717 * 10 6 5 12 12 C 1.42901 * 116.99807 * 180.02562 * 11 10 6 13 13 C 1.53002 * 109.46995 * 180.02562 * 12 11 10 14 14 H 1.09000 * 112.84885 * 316.19494 * 13 12 11 15 15 C 1.53785 * 113.61507 * 87.50079 * 13 12 11 16 16 C 1.53776 * 87.07765 * 89.11589 * 15 13 12 17 17 O 1.42897 * 113.61591 * 270.88315 * 16 15 13 18 18 C 1.42905 * 114.00086 * 162.82778 * 17 16 15 19 19 C 1.53007 * 113.68983 * 139.99116 * 16 15 13 20 20 F 1.39901 * 109.47078 * 327.01968 * 19 16 15 21 21 F 1.39902 * 109.46923 * 87.01541 * 19 16 15 22 22 F 1.39894 * 109.47429 * 207.01671 * 19 16 15 23 23 C 1.53781 * 113.61462 * 185.00132 * 13 12 11 24 24 C 1.38718 * 120.00189 * 359.77174 * 10 6 5 25 25 C 1.38108 * 120.00024 * 359.97438 * 24 10 6 26 26 H 1.09006 * 109.47052 * 59.99909 * 1 2 3 27 27 H 1.08994 * 109.47334 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47206 * 300.00058 * 1 2 3 29 29 H 1.09000 * 109.47206 * 239.99942 * 2 1 3 30 30 H 1.08994 * 109.47254 * 120.00493 * 2 1 3 31 31 H 1.08005 * 120.00288 * 359.97438 * 5 4 3 32 32 H 1.09005 * 109.47018 * 135.27481 * 7 6 5 33 33 H 0.96698 * 114.00073 * 59.99709 * 8 7 6 34 34 H 1.48506 * 109.99623 * 58.68199 * 9 7 6 35 35 H 1.48500 * 110.00021 * 179.97438 * 9 7 6 36 36 H 1.08991 * 109.47233 * 299.99937 * 12 11 10 37 37 H 1.08995 * 109.47106 * 60.00041 * 12 11 10 38 38 H 1.08993 * 113.61242 * 203.66601 * 15 13 12 39 39 H 1.08997 * 113.61443 * 334.56933 * 15 13 12 40 40 H 1.09010 * 109.46789 * 303.09048 * 18 17 16 41 41 H 1.08997 * 109.47550 * 63.08725 * 18 17 16 42 42 H 1.08999 * 109.47185 * 183.09518 * 18 17 16 43 43 H 1.08995 * 113.61256 * 25.42769 * 23 13 12 44 44 H 1.08997 * 113.61001 * 156.33635 * 23 13 12 45 45 H 1.08003 * 120.00172 * 179.97438 * 24 10 6 46 46 H 1.07995 * 120.00484 * 180.02562 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.3545 1.5254 -0.0005 5 6 3.8845 2.8068 -0.0062 6 6 5.2542 2.9878 -0.0014 7 6 5.8302 4.3804 -0.0023 8 8 6.3337 4.6866 -1.3041 9 14 4.5001 5.6030 0.4524 10 6 6.0989 1.8880 -0.0013 11 8 7.4470 2.0661 -0.0017 12 6 8.2570 0.8888 -0.0021 13 6 9.7345 1.2862 -0.0019 14 1 9.9549 2.0965 -0.6968 15 6 10.3133 1.5050 1.4059 16 6 10.6612 0.0071 1.4100 17 8 9.6135 -0.8226 1.9158 18 6 9.7507 -2.2039 1.5764 19 6 12.0219 -0.3063 2.0358 20 9 12.9068 0.7463 1.7790 21 9 11.8741 -0.4647 3.4179 22 9 12.5287 -1.4871 1.4827 23 6 10.6939 0.0908 -0.1252 24 6 5.5687 0.6062 -0.0013 25 6 4.1995 0.4252 -0.0009 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 1.8933 -0.5138 -0.8900 30 1 1.8933 -0.5139 0.8899 31 1 3.2267 3.6634 -0.0107 32 1 6.6410 4.4387 0.7239 33 1 5.6653 4.6538 -2.0021 34 1 3.9461 5.2762 1.7909 35 1 5.0556 6.9801 0.4556 36 1 8.0399 0.2981 0.8877 37 1 8.0393 0.2984 -0.8921 38 1 11.1871 2.1562 1.4223 39 1 9.5643 1.7812 2.1480 40 1 9.8075 -2.3079 0.4928 41 1 10.6603 -2.6004 2.0276 42 1 8.8890 -2.7572 1.9498 43 1 10.2521 -0.7745 -0.6191 44 1 11.6718 0.3556 -0.5273 45 1 6.2265 -0.2504 -0.0017 46 1 3.7866 -0.5727 -0.0005 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_508406_17321600.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:24:04 Heat of formation + Delta-G solvation = -238.104549 kcal Electronic energy + Delta-G solvation = -34275.835593 eV Core-core repulsion = 29105.706296 eV Total energy + Delta-G solvation = -5170.129297 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.142 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -51.18395 -48.73021 -48.61728 -41.88805 -41.31254 -39.93314 -38.25033 -37.23650 -36.79431 -32.85508 -32.68678 -30.90614 -29.59212 -28.34340 -27.33423 -26.94697 -26.81625 -24.47840 -23.90351 -22.91929 -22.04386 -20.60839 -19.87193 -19.49487 -19.39152 -19.23978 -18.67595 -17.87981 -17.39652 -17.21514 -17.03820 -16.73101 -16.59368 -16.04167 -15.94799 -15.75490 -15.64183 -15.52456 -15.48991 -15.16846 -15.09612 -14.85406 -14.81171 -14.70315 -14.42443 -14.26738 -14.19317 -14.00253 -13.77955 -13.54893 -13.37949 -13.35100 -13.02166 -12.86529 -12.78750 -12.41420 -12.21797 -12.13336 -11.99779 -11.91964 -11.77230 -11.60655 -11.30797 -10.88312 -10.29880 -10.05795 -8.69889 -4.94591 0.11465 0.45728 1.37365 1.53391 1.73762 1.94720 2.05375 2.06268 2.21767 2.52168 2.60476 2.62642 2.84492 3.23867 3.33612 3.44773 3.53095 3.59480 3.73217 3.75950 3.91961 3.99995 4.02406 4.05659 4.07893 4.12452 4.19892 4.23076 4.24647 4.29735 4.33015 4.38799 4.46137 4.52197 4.55462 4.62502 4.66407 4.70768 4.72927 4.80442 4.91450 5.05486 5.08165 5.23306 5.27888 5.50474 5.57147 6.31243 6.50374 6.69836 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.054 3.946 3 O -0.314 6.314 4 C 0.100 3.900 5 C -0.109 4.109 6 C -0.115 4.115 7 C -0.053 4.053 8 O -0.533 6.533 9 Si 0.679 3.321 10 C 0.122 3.878 11 O -0.300 6.300 12 C 0.069 3.931 13 C -0.097 4.097 14 H 0.108 0.892 15 C -0.112 4.112 16 C 0.039 3.961 17 O -0.333 6.333 18 C 0.009 3.991 19 C 0.437 3.563 20 F -0.174 7.174 21 F -0.174 7.174 22 F -0.182 7.182 23 C -0.143 4.143 24 C -0.168 4.168 25 C -0.162 4.162 26 H 0.068 0.932 27 H 0.079 0.921 28 H 0.067 0.933 29 H 0.062 0.938 30 H 0.061 0.939 31 H 0.143 0.857 32 H 0.115 0.885 33 H 0.376 0.624 34 H -0.256 1.256 35 H -0.253 1.253 36 H 0.081 0.919 37 H 0.065 0.935 38 H 0.116 0.884 39 H 0.098 0.902 40 H 0.055 0.945 41 H 0.054 0.946 42 H 0.101 0.899 43 H 0.094 0.906 44 H 0.113 0.887 45 H 0.132 0.868 46 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.484 -3.405 -3.364 5.919 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.021 4.021 3 O -0.229 6.229 4 C 0.055 3.945 5 C -0.127 4.127 6 C -0.116 4.116 7 C -0.164 4.164 8 O -0.338 6.338 9 Si 0.580 3.420 10 C 0.077 3.923 11 O -0.214 6.214 12 C -0.006 4.006 13 C -0.115 4.115 14 H 0.126 0.874 15 C -0.149 4.149 16 C -0.004 4.004 17 O -0.250 6.250 18 C -0.086 4.086 19 C 0.382 3.618 20 F -0.156 7.156 21 F -0.156 7.156 22 F -0.163 7.163 23 C -0.180 4.180 24 C -0.187 4.187 25 C -0.181 4.181 26 H 0.087 0.913 27 H 0.097 0.903 28 H 0.086 0.914 29 H 0.080 0.920 30 H 0.079 0.921 31 H 0.160 0.840 32 H 0.133 0.867 33 H 0.222 0.778 34 H -0.180 1.180 35 H -0.178 1.178 36 H 0.099 0.901 37 H 0.083 0.917 38 H 0.135 0.865 39 H 0.117 0.883 40 H 0.074 0.926 41 H 0.073 0.927 42 H 0.120 0.880 43 H 0.112 0.888 44 H 0.131 0.869 45 H 0.150 0.850 46 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -3.355 -2.354 -2.320 4.710 hybrid contribution 1.064 -1.473 0.301 1.842 sum -2.291 -3.827 -2.019 4.896 Atomic orbital electron populations 1.21785 0.92448 1.03068 1.03746 1.22803 0.96146 0.81776 1.01338 1.86097 1.18390 1.29398 1.88992 1.18708 0.82730 0.93521 0.99564 1.20034 0.93071 0.95213 1.04400 1.19452 0.91409 0.95206 1.05520 1.24871 1.06199 0.95987 0.89293 1.86547 1.39330 1.91923 1.16006 0.94993 0.82763 0.78229 0.85980 1.18561 0.82901 0.92637 0.98236 1.86110 1.13633 1.33092 1.88553 1.22710 0.88622 0.86762 1.02476 1.22057 0.92272 0.99070 0.98126 0.87408 1.23261 1.03454 0.89648 0.98512 1.24058 0.84294 0.96359 0.95646 1.88088 1.42472 1.18869 1.75596 1.23150 1.03728 0.80881 1.00880 1.21178 0.88765 0.74481 0.77347 1.93184 1.71232 1.57313 1.93846 1.93221 1.95828 1.95300 1.31201 1.93188 1.89241 1.48582 1.85316 1.23598 1.02042 0.99929 0.92437 1.21084 0.95684 0.96112 1.05789 1.21093 0.93405 0.98403 1.05160 0.91315 0.90259 0.91388 0.91999 0.92077 0.83994 0.86716 0.77773 1.18033 1.17758 0.90054 0.91707 0.86539 0.88341 0.92622 0.92733 0.88023 0.88763 0.86904 0.84995 0.84987 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.32 10.28 37.16 0.38 0.71 16 2 C 0.05 -0.07 5.46 37.16 0.20 0.14 16 3 O -0.31 -0.45 10.14 -19.70 -0.20 -0.65 16 4 C 0.10 0.15 6.69 -39.24 -0.26 -0.12 16 5 C -0.11 -0.11 8.59 -39.45 -0.34 -0.45 16 6 C -0.11 -0.18 5.27 -104.49 -0.55 -0.73 16 7 C -0.05 -0.07 2.37 36.00 0.09 0.02 16 8 O -0.53 -0.76 12.88 -35.23 -0.45 -1.21 16 9 Si 0.68 0.09 29.92 -169.99 -5.09 -5.00 16 10 C 0.12 0.25 6.66 -39.24 -0.26 -0.02 16 11 O -0.30 -0.61 9.46 -19.70 -0.19 -0.80 16 12 C 0.07 -0.04 4.32 37.16 0.16 0.12 16 13 C -0.10 0.13 4.20 -89.80 -0.38 -0.24 16 14 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 15 C -0.11 0.09 6.89 -25.92 -0.18 -0.09 16 16 C 0.04 -0.02 0.84 -89.81 -0.08 -0.09 16 17 O -0.33 -0.03 8.36 -35.23 -0.29 -0.32 16 18 C 0.01 -0.02 10.33 101.05 1.04 1.03 16 19 C 0.44 0.53 2.52 37.16 0.09 0.63 16 20 F -0.17 -0.25 15.82 2.25 0.04 -0.21 16 21 F -0.17 -0.52 17.11 2.25 0.04 -0.48 16 22 F -0.18 -0.25 15.34 2.25 0.03 -0.22 16 23 C -0.14 0.32 6.52 -25.92 -0.17 0.15 16 24 C -0.17 -0.12 9.03 -39.45 -0.36 -0.48 16 25 C -0.16 -0.09 9.03 -39.45 -0.36 -0.44 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 30 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 31 H 0.14 -0.12 5.14 -52.48 -0.27 -0.39 16 32 H 0.12 0.26 7.82 -51.93 -0.41 -0.15 16 33 H 0.38 -0.94 8.70 45.56 0.40 -0.55 16 34 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 35 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 36 H 0.08 -0.03 5.64 -51.93 -0.29 -0.32 16 37 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 38 H 0.12 -0.18 7.03 -51.93 -0.37 -0.55 16 39 H 0.10 -0.01 8.10 -51.93 -0.42 -0.43 16 40 H 0.06 -0.18 6.60 -51.92 -0.34 -0.52 16 41 H 0.05 -0.06 6.56 -51.93 -0.34 -0.40 16 42 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 43 H 0.09 -0.31 6.64 -51.93 -0.34 -0.65 16 44 H 0.11 -0.33 8.04 -51.93 -0.42 -0.75 16 45 H 0.13 -0.14 6.29 -52.48 -0.33 -0.47 16 46 H 0.13 -0.19 6.29 -52.49 -0.33 -0.52 16 LS Contribution 378.79 15.07 5.71 5.71 Total: 0.00 -6.71 378.79 -7.33 -14.04 By element: Atomic # 1 Polarization: -5.03 SS G_CDS: -5.97 Total: -11.00 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: -0.96 Total: 0.13 kcal Atomic # 8 Polarization: -1.84 SS G_CDS: -1.13 Total: -2.98 kcal Atomic # 9 Polarization: -1.02 SS G_CDS: 0.11 Total: -0.91 kcal Atomic # 14 Polarization: 0.09 SS G_CDS: -5.09 Total: -5.00 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -6.71 -7.33 -14.04 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_508406_17321600.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -224.062 kcal (2) G-P(sol) polarization free energy of solvation -6.713 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -230.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.330 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.043 kcal (6) G-S(sol) free energy of system = (1) + (5) -238.105 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds