Wall clock time and date at job start Tue Mar 9 2021 18:58:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53008 * 109.47008 * 2 1 4 4 C 1.52994 * 109.47286 * 239.99698 * 2 1 3 5 5 O 1.45202 * 109.46964 * 119.99510 * 2 1 3 6 6 C 1.34638 * 116.99776 * 60.00058 * 5 2 1 7 7 O 1.21513 * 119.99956 * 0.02562 * 6 5 2 8 8 N 1.34777 * 119.99672 * 180.27362 * 6 5 2 9 9 C 1.46505 * 119.99722 * 179.72257 * 8 6 5 10 10 H 1.08994 * 112.85028 * 334.67598 * 9 8 6 11 11 C 1.53783 * 113.61033 * 105.86682 * 9 8 6 12 12 C 1.54054 * 86.98425 * 89.16273 * 11 9 8 13 13 H 1.09000 * 113.68585 * 270.87149 * 12 11 9 14 14 C 1.52996 * 113.61853 * 139.98153 * 12 11 9 15 15 O 1.42896 * 109.47721 * 87.50379 * 14 12 11 16 16 C 1.35948 * 117.00279 * 180.02562 * 15 14 12 17 17 C 1.38917 * 120.06378 * 179.72266 * 16 15 14 18 18 F 1.35101 * 120.04210 * 0.02562 * 17 16 15 19 19 C 1.38334 * 119.90353 * 179.76565 * 17 16 15 20 20 C 1.38255 * 120.03143 * 0.48940 * 19 17 16 21 21 C 1.50699 * 119.93675 * 179.77043 * 20 19 17 22 22 O 1.42900 * 109.46688 * 245.01826 * 21 20 19 23 23 Si 1.86300 * 109.47032 * 5.01515 * 21 20 19 24 24 C 1.38266 * 120.12607 * 359.78312 * 20 19 17 25 25 C 1.38185 * 120.09292 * 359.95966 * 24 20 19 26 26 C 1.53775 * 113.61495 * 203.47401 * 9 8 6 27 27 H 1.08997 * 109.47363 * 300.00806 * 1 2 3 28 28 H 1.09005 * 109.46795 * 60.00585 * 1 2 3 29 29 H 1.09001 * 109.46811 * 179.97438 * 1 2 3 30 30 H 1.08996 * 109.46984 * 179.97438 * 3 2 1 31 31 H 1.08996 * 109.46584 * 299.99377 * 3 2 1 32 32 H 1.08998 * 109.47272 * 59.99708 * 3 2 1 33 33 H 1.08995 * 109.47307 * 299.99583 * 4 2 1 34 34 H 1.08999 * 109.47211 * 60.00515 * 4 2 1 35 35 H 1.09010 * 109.46887 * 180.02562 * 4 2 1 36 36 H 0.97000 * 120.00483 * 359.73141 * 8 6 5 37 37 H 1.09005 * 113.61495 * 203.66674 * 11 9 8 38 38 H 1.09001 * 113.61494 * 334.56743 * 11 9 8 39 39 H 1.09000 * 109.47281 * 207.50913 * 14 12 11 40 40 H 1.09005 * 109.47231 * 327.49867 * 14 12 11 41 41 H 1.08000 * 119.97916 * 180.23206 * 19 17 16 42 42 H 1.08996 * 109.47382 * 125.02122 * 21 20 19 43 43 H 0.96696 * 114.00001 * 179.97438 * 22 21 20 44 44 H 1.48502 * 109.99709 * 178.68540 * 23 21 20 45 45 H 1.48500 * 110.00190 * 299.99993 * 23 21 20 46 46 H 1.07997 * 119.95084 * 179.97438 * 24 20 19 47 47 H 1.08000 * 120.00994 * 180.02562 * 25 24 20 48 48 H 1.08997 * 113.61448 * 25.43517 * 26 9 8 49 49 H 1.09004 * 113.61422 * 156.34001 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7213 -1.2491 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9722 1.3385 7 8 0.9516 -2.5096 0.5037 8 7 2.0630 -2.6638 2.4199 9 6 1.6643 -4.0633 2.5893 10 1 0.7361 -4.3046 2.0713 11 6 2.7996 -5.0644 2.3174 12 6 3.1635 -4.9321 3.8085 13 1 3.8700 -4.1288 4.0172 14 6 3.5602 -6.2571 4.4626 15 8 4.9605 -6.4770 4.2820 16 6 5.4787 -7.6190 4.8069 17 6 6.8317 -7.8995 4.6636 18 9 7.6348 -7.0373 4.0026 19 6 7.3564 -9.0601 5.2032 20 6 6.5332 -9.9444 5.8754 21 6 7.1061 -11.2107 6.4580 22 8 6.5443 -12.3403 5.7869 23 14 8.9560 -11.2142 6.2376 24 6 5.1853 -9.6693 6.0139 25 6 4.6567 -8.5089 5.4815 26 6 1.6962 -4.5404 4.0508 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1300 1.4426 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6766 1.9564 0.8899 33 1 1.6768 -1.7489 -1.2491 34 1 1.6768 -0.2075 -2.1392 35 1 3.1301 -0.7216 -1.2488 36 1 2.6225 -2.2349 3.0862 37 1 2.4482 -6.0583 2.0402 38 1 3.5666 -4.6824 1.6437 39 1 3.3328 -6.2189 5.5279 40 1 3.0020 -7.0716 4.0010 41 1 8.4088 -9.2775 5.0957 42 1 6.8665 -11.2629 7.5200 43 1 6.8689 -13.1917 6.1107 44 1 9.5364 -12.4430 6.8362 45 1 9.2956 -11.1434 4.7937 46 1 4.5447 -10.3622 6.5392 47 1 3.6037 -8.2951 5.5909 48 1 1.5731 -3.7357 4.7755 49 1 1.0438 -5.3913 4.2467 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_7834706_15734082.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:58:12 Heat of formation + Delta-G solvation = -138.516075 kcal Electronic energy + Delta-G solvation = -31030.461540 eV Core-core repulsion = 26454.369004 eV Total energy + Delta-G solvation = -4576.092536 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -49.69196 -41.89044 -41.28803 -40.38789 -39.08914 -37.77720 -37.32516 -35.24977 -34.08801 -32.21447 -31.73021 -29.55586 -28.30793 -28.26663 -26.93107 -26.45181 -25.04167 -23.91070 -22.98249 -22.33748 -21.07849 -20.42626 -19.43260 -19.18820 -18.64119 -17.95153 -17.91642 -17.51266 -17.30344 -17.04505 -16.67216 -16.19595 -16.17044 -16.08413 -15.93826 -15.43377 -15.34250 -15.23252 -15.03446 -14.52304 -14.29977 -14.16603 -14.03463 -13.80121 -13.58540 -13.45914 -13.38742 -13.23498 -13.03032 -12.83564 -12.80618 -12.71735 -12.44495 -12.31090 -12.22214 -12.04847 -12.01440 -11.84251 -11.73218 -11.35037 -11.27362 -10.95502 -10.57342 -10.17892 -10.03141 -9.20195 -5.02049 0.03415 0.10512 1.16856 1.20188 1.53445 1.87078 1.89845 1.92579 2.37781 3.05743 3.10614 3.23465 3.30067 3.34276 3.56677 3.63693 3.69381 3.74599 3.79713 3.85426 3.90909 3.99213 4.06351 4.07156 4.20491 4.24047 4.29700 4.45244 4.46958 4.53566 4.55168 4.58708 4.65134 4.75551 4.76428 4.80195 4.85862 4.89265 4.93848 4.95205 4.95289 5.00358 5.04434 5.11172 5.31882 5.35078 5.38709 5.49858 5.53783 5.62470 6.22136 6.35797 6.41422 7.43691 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.653 3.347 7 O -0.564 6.564 8 N -0.695 5.695 9 C 0.138 3.862 10 H 0.111 0.889 11 C -0.147 4.147 12 C -0.111 4.111 13 H 0.104 0.896 14 C 0.067 3.933 15 O -0.303 6.303 16 C 0.106 3.894 17 C 0.075 3.925 18 F -0.128 7.128 19 C -0.112 4.112 20 C -0.084 4.084 21 C -0.070 4.070 22 O -0.536 6.536 23 Si 0.678 3.322 24 C -0.059 4.059 25 C -0.183 4.183 26 C -0.134 4.134 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.407 0.593 37 H 0.096 0.904 38 H 0.078 0.922 39 H 0.069 0.931 40 H 0.069 0.931 41 H 0.145 0.855 42 H 0.080 0.920 43 H 0.381 0.619 44 H -0.258 1.258 45 H -0.253 1.253 46 H 0.135 0.865 47 H 0.141 0.859 48 H 0.083 0.917 49 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.818 0.437 5.191 5.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.407 3.593 7 O -0.453 6.453 8 N -0.354 5.354 9 C 0.034 3.966 10 H 0.129 0.871 11 C -0.185 4.185 12 C -0.130 4.130 13 H 0.123 0.877 14 C -0.008 4.008 15 O -0.216 6.216 16 C 0.059 3.941 17 C 0.055 3.945 18 F -0.107 7.107 19 C -0.130 4.130 20 C -0.085 4.085 21 C -0.180 4.180 22 O -0.343 6.343 23 Si 0.579 3.421 24 C -0.077 4.077 25 C -0.201 4.201 26 C -0.172 4.172 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.242 0.758 37 H 0.115 0.885 38 H 0.097 0.903 39 H 0.087 0.913 40 H 0.087 0.913 41 H 0.163 0.837 42 H 0.098 0.902 43 H 0.229 0.771 44 H -0.183 1.183 45 H -0.178 1.178 46 H 0.153 0.847 47 H 0.159 0.841 48 H 0.102 0.898 49 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -0.683 0.517 3.896 3.989 hybrid contribution -0.258 -0.890 0.207 0.950 sum -0.941 -0.373 4.103 4.226 Atomic orbital electron populations 1.22523 0.93827 1.05041 1.02722 1.22129 0.94450 0.91565 0.81839 1.21879 1.02365 0.92323 1.03335 1.22523 1.01648 1.03450 0.96528 1.86307 1.71484 1.23351 1.46769 1.18057 0.78590 0.80582 0.82097 1.90921 1.40887 1.70493 1.42997 1.44355 1.55552 1.11824 1.23666 1.21739 0.99122 0.78657 0.97120 0.87146 1.23618 0.98771 1.00172 0.95971 1.22723 0.97013 0.96678 0.96561 0.87739 1.22959 0.79097 0.97886 1.00870 1.86155 1.25705 1.36586 1.73183 1.19007 0.91585 0.87765 0.95708 1.16765 0.85804 0.90860 1.01054 1.91534 1.72349 1.68367 1.78401 1.20838 1.00770 0.93083 0.98341 1.18924 0.93957 0.94852 1.00729 1.24676 1.09724 0.85560 0.98002 1.86586 1.68215 1.15980 1.63542 0.95050 0.75122 0.88200 0.83711 1.20865 0.94242 0.95473 0.97150 1.21195 1.00345 0.95803 1.02789 1.23354 0.95422 1.02164 0.96277 0.92108 0.90916 0.89436 0.91374 0.89913 0.91391 0.89421 0.90913 0.92096 0.75781 0.88537 0.90337 0.91305 0.91297 0.83730 0.90192 0.77051 1.18274 1.17781 0.84690 0.84143 0.89811 0.87813 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.27 8.37 37.16 0.31 0.05 16 2 C 0.14 0.21 1.13 -90.62 -0.10 0.11 16 3 C -0.14 0.07 8.85 37.16 0.33 0.40 16 4 C -0.18 -0.31 8.37 37.15 0.31 0.00 16 5 O -0.36 -0.96 9.94 -40.32 -0.40 -1.36 16 6 C 0.65 1.92 8.06 54.06 0.44 2.36 16 7 O -0.56 -2.97 11.50 -19.28 -0.22 -3.19 16 8 N -0.70 0.03 5.27 -57.93 -0.31 -0.28 16 9 C 0.14 -0.15 4.30 -67.12 -0.29 -0.44 16 10 H 0.11 0.01 7.50 -51.93 -0.39 -0.38 16 11 C -0.15 0.16 7.45 -25.77 -0.19 -0.04 16 12 C -0.11 0.25 3.90 -89.66 -0.35 -0.10 16 13 H 0.10 -0.19 8.14 -51.93 -0.42 -0.62 16 14 C 0.07 -0.11 4.58 37.16 0.17 0.06 16 15 O -0.30 -0.56 10.00 -19.58 -0.20 -0.75 16 16 C 0.11 0.21 6.69 -39.17 -0.26 -0.06 16 17 C 0.08 0.21 7.31 -39.29 -0.29 -0.07 16 18 F -0.13 -0.56 17.11 2.25 0.04 -0.52 16 19 C -0.11 -0.15 8.64 -39.54 -0.34 -0.49 16 20 C -0.08 -0.06 5.38 -104.61 -0.56 -0.63 16 21 C -0.07 0.05 2.79 36.01 0.10 0.15 16 22 O -0.54 -0.25 12.81 -35.23 -0.45 -0.70 16 23 Si 0.68 -0.74 29.85 -169.99 -5.07 -5.82 16 24 C -0.06 -0.01 9.68 -39.59 -0.38 -0.39 16 25 C -0.18 0.00 9.04 -39.45 -0.36 -0.35 16 26 C -0.13 0.47 7.38 -25.92 -0.19 0.28 16 27 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 29 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 30 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 33 H 0.09 0.33 5.88 -51.93 -0.31 0.03 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.06 0.09 8.14 -51.92 -0.42 -0.33 16 36 H 0.41 -0.78 8.81 -40.82 -0.36 -1.14 16 37 H 0.10 -0.16 7.90 -51.93 -0.41 -0.57 16 38 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 39 H 0.07 -0.21 7.66 -51.93 -0.40 -0.61 16 40 H 0.07 -0.18 7.37 -51.93 -0.38 -0.57 16 41 H 0.15 -0.01 4.86 -52.49 -0.26 -0.27 16 42 H 0.08 -0.22 7.96 -51.93 -0.41 -0.64 16 43 H 0.38 -1.33 8.74 45.56 0.40 -0.93 16 44 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 45 H -0.25 -0.57 7.05 56.52 0.40 -0.17 16 46 H 0.14 -0.18 8.06 -52.49 -0.42 -0.61 16 47 H 0.14 -0.34 6.30 -52.49 -0.33 -0.67 16 48 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 49 H 0.10 -0.48 8.10 -51.93 -0.42 -0.90 16 LS Contribution 399.00 15.07 6.01 6.01 Total: 0.00 -8.03 399.00 -9.68 -17.71 By element: Atomic # 1 Polarization: -4.52 SS G_CDS: -7.42 Total: -11.94 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: -1.66 Total: 0.83 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.31 Total: -0.28 kcal Atomic # 8 Polarization: -4.73 SS G_CDS: -1.27 Total: -6.00 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.04 Total: -0.52 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: -5.07 Total: -5.82 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -8.03 -9.68 -17.71 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_7834706_15734082.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.807 kcal (2) G-P(sol) polarization free energy of solvation -8.029 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.835 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.681 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.709 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.516 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds