Wall clock time and date at job start Tue Mar 9 2021 19:13:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35994 * 116.99606 * 2 1 4 4 C 1.39149 * 120.06307 * 179.72378 * 3 2 1 5 5 O 1.36009 * 120.06421 * 0.02562 * 4 3 2 6 6 C 1.42908 * 117.00100 * 179.97438 * 5 4 3 7 7 C 1.53000 * 109.46941 * 180.02562 * 6 5 4 8 8 H 1.08994 * 112.84999 * 45.33671 * 7 6 5 9 9 C 1.53785 * 113.61131 * 176.53109 * 7 6 5 10 10 C 1.53782 * 87.08131 * 139.98325 * 9 7 6 11 11 H 1.08999 * 113.61505 * 89.11044 * 10 9 7 12 12 O 1.42900 * 113.61183 * 219.93667 * 10 9 7 13 13 C 1.53779 * 113.61643 * 274.13729 * 7 6 5 14 14 C 1.38560 * 119.87403 * 179.74697 * 4 3 2 15 15 C 1.38240 * 120.00654 * 0.52900 * 14 4 3 16 16 C 1.50697 * 119.93223 * 179.76334 * 15 14 4 17 17 O 1.42900 * 109.47087 * 15.74031 * 16 15 14 18 18 Si 1.86298 * 109.47418 * 255.73884 * 16 15 14 19 19 C 1.38332 * 120.13782 * 359.74651 * 15 14 4 20 20 Br 1.89102 * 119.93870 * 179.97438 * 19 15 14 21 21 C 1.38317 * 120.12465 * 359.97425 * 19 15 14 22 22 H 1.09002 * 109.47462 * 179.97438 * 1 2 3 23 23 H 1.09006 * 109.47027 * 59.99832 * 1 2 3 24 24 H 1.09004 * 109.47180 * 300.00095 * 1 2 3 25 25 H 1.08995 * 109.47036 * 300.00388 * 6 5 4 26 26 H 1.09001 * 109.46637 * 60.00663 * 6 5 4 27 27 H 1.09004 * 113.61223 * 254.53197 * 9 7 6 28 28 H 1.09000 * 113.61128 * 25.43132 * 9 7 6 29 29 H 0.96705 * 113.99689 * 179.97438 * 12 10 9 30 30 H 1.08998 * 113.61280 * 334.57015 * 13 7 6 31 31 H 1.09001 * 113.61317 * 105.47324 * 13 7 6 32 32 H 1.07997 * 120.00113 * 180.26875 * 14 4 3 33 33 H 1.08999 * 109.47117 * 135.74000 * 16 15 14 34 34 H 0.96700 * 113.99902 * 179.97438 * 17 16 15 35 35 H 1.48497 * 110.00295 * 65.14579 * 18 16 15 36 36 H 1.48505 * 110.00033 * 186.46916 * 18 16 15 37 37 H 1.08002 * 120.00699 * 179.97438 * 21 19 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 3.4358 1.2862 0.0058 5 8 4.1792 0.1472 0.0110 6 6 5.6001 0.2999 0.0162 7 6 6.2612 -1.0799 0.0209 8 1 5.8101 -1.7678 -0.6942 9 6 7.7961 -1.0278 -0.0586 10 6 7.8095 -2.1782 0.9619 11 1 7.7816 -3.1675 0.5050 12 8 8.8319 -2.0529 1.9523 13 6 6.4303 -1.6773 1.4278 14 6 4.0607 2.5229 0.0005 15 6 3.3041 3.6798 0.0005 16 6 3.9855 5.0239 0.0001 17 8 5.3574 4.8624 -0.3657 18 14 3.8808 5.7738 1.7022 19 6 1.9227 3.6063 0.0005 20 35 0.8932 5.1925 0.0012 21 6 1.2931 2.3747 0.0000 22 1 -0.3634 -1.0277 -0.0005 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 0.5139 0.8900 25 1 5.9099 0.8478 -0.8736 26 1 5.9029 0.8512 0.9064 27 1 8.1924 -1.3058 -1.0352 28 1 8.2218 -0.1000 0.3237 29 1 8.8451 -2.7733 2.5973 30 1 6.4819 -0.9274 2.2172 31 1 5.7256 -2.4788 1.6494 32 1 5.1390 2.5830 0.0006 33 1 3.4932 5.6807 -0.7171 34 1 5.8587 5.6890 -0.3871 35 1 4.6540 4.9521 2.6677 36 1 4.4090 7.1616 1.6792 37 1 0.2145 2.3195 0.0004 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_8663_11354858.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 19:13:16 Heat of formation + Delta-G solvation = -96.203525 kcal Electronic energy + Delta-G solvation = -22491.656385 eV Core-core repulsion = 18862.837159 eV Total energy + Delta-G solvation = -3628.819226 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.034 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.77739 -40.52050 -39.32094 -38.87150 -37.26159 -36.02772 -32.99674 -32.09611 -30.42538 -29.09921 -28.60180 -26.77831 -26.11977 -24.20886 -22.70310 -22.34978 -20.61801 -19.47616 -18.91026 -18.44190 -18.10646 -17.33132 -17.19153 -16.58562 -16.25396 -16.21727 -16.10514 -15.78562 -15.55024 -14.96667 -14.55486 -14.13242 -14.05136 -13.96403 -13.54544 -13.49284 -13.02202 -12.82240 -12.71734 -12.67707 -12.33429 -12.28566 -12.17077 -11.94482 -11.78355 -11.38595 -11.25424 -11.19929 -10.78165 -10.73726 -9.66346 -8.76684 -4.93814 0.01724 0.10692 0.53653 1.24340 1.57841 1.92968 2.04985 2.22865 2.49505 2.95726 3.20016 3.41994 3.50289 3.55680 3.69257 3.78855 3.87012 3.96105 4.10687 4.18463 4.19943 4.21590 4.22148 4.32039 4.40605 4.55383 4.56787 4.61665 4.73033 4.73915 4.75064 4.83281 4.93850 5.07892 5.18588 5.32114 5.42955 6.01102 6.33613 6.49939 6.67371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.300 6.300 3 C 0.104 3.896 4 C 0.123 3.877 5 O -0.296 6.296 6 C 0.068 3.932 7 C -0.108 4.108 8 H 0.106 0.894 9 C -0.120 4.120 10 C 0.076 3.924 11 H 0.085 0.915 12 O -0.560 6.560 13 C -0.163 4.163 14 C -0.152 4.152 15 C -0.040 4.040 16 C -0.071 4.071 17 O -0.536 6.536 18 Si 0.663 3.337 19 C -0.091 4.091 20 Br -0.024 7.024 21 C -0.139 4.139 22 H 0.104 0.896 23 H 0.057 0.943 24 H 0.058 0.942 25 H 0.068 0.932 26 H 0.066 0.934 27 H 0.081 0.919 28 H 0.093 0.907 29 H 0.380 0.620 30 H 0.090 0.910 31 H 0.075 0.925 32 H 0.152 0.848 33 H 0.088 0.912 34 H 0.385 0.615 35 H -0.247 1.247 36 H -0.246 1.246 37 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.111 -0.384 0.087 2.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.214 6.214 3 C 0.057 3.943 4 C 0.077 3.923 5 O -0.209 6.209 6 C -0.007 4.007 7 C -0.126 4.126 8 H 0.125 0.875 9 C -0.157 4.157 10 C 0.017 3.983 11 H 0.103 0.897 12 O -0.366 6.366 13 C -0.201 4.201 14 C -0.171 4.171 15 C -0.043 4.043 16 C -0.179 4.179 17 O -0.344 6.344 18 Si 0.560 3.440 19 C -0.171 4.171 20 Br 0.062 6.938 21 C -0.160 4.160 22 H 0.122 0.878 23 H 0.076 0.924 24 H 0.077 0.923 25 H 0.086 0.914 26 H 0.084 0.916 27 H 0.099 0.901 28 H 0.112 0.888 29 H 0.228 0.772 30 H 0.109 0.891 31 H 0.093 0.907 32 H 0.169 0.831 33 H 0.105 0.895 34 H 0.233 0.767 35 H -0.171 1.171 36 H -0.170 1.170 37 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -2.075 0.076 0.387 2.113 hybrid contribution 0.876 -0.178 -0.436 0.994 sum -1.200 -0.102 -0.049 1.205 Atomic orbital electron populations 1.23168 0.78023 1.04546 1.01529 1.86221 1.21414 1.25003 1.88730 1.18110 0.88996 0.85227 1.01954 1.18310 0.88277 0.86233 0.99506 1.86191 1.18762 1.27804 1.88185 1.22889 0.77909 0.98017 1.01874 1.22309 0.95185 0.95958 0.99170 0.87546 1.23066 0.93881 0.99556 0.99234 1.23329 0.86790 0.98248 0.89942 0.89740 1.86524 1.54977 1.51700 1.43380 1.23794 0.97773 1.01654 0.96848 1.20838 1.01323 0.89441 1.05518 1.18749 0.90970 0.94310 1.00246 1.24769 0.84143 0.98111 1.10922 1.86450 1.20629 1.36460 1.90846 0.94398 0.93157 0.79668 0.76746 1.20969 0.92645 0.92116 1.11369 1.96689 1.69384 1.30833 1.96917 1.20892 1.00536 0.89494 1.05069 0.87776 0.92405 0.92328 0.91375 0.91555 0.90077 0.88811 0.77218 0.89124 0.90669 0.83079 0.89463 0.76700 1.17087 1.16976 0.83270 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.30 -0.83 10.28 -34.24 -0.35 -1.19 16 3 C 0.10 0.29 6.70 -39.13 -0.26 0.03 16 4 C 0.12 0.42 6.70 -39.12 -0.26 0.16 16 5 O -0.30 -1.03 9.92 -34.29 -0.34 -1.37 16 6 C 0.07 0.07 4.57 37.16 0.17 0.24 16 7 C -0.11 0.00 4.00 -89.81 -0.36 -0.36 16 8 H 0.11 -0.01 8.14 -51.93 -0.42 -0.44 16 9 C -0.12 0.02 7.47 -25.92 -0.19 -0.17 16 10 C 0.08 -0.01 5.21 -25.82 -0.13 -0.14 16 11 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 12 O -0.56 -0.61 13.68 -35.23 -0.48 -1.09 16 13 C -0.16 -0.02 7.48 -25.83 -0.19 -0.21 16 14 C -0.15 -0.41 8.35 -39.46 -0.33 -0.74 16 15 C -0.04 -0.08 4.51 -104.59 -0.47 -0.55 16 16 C -0.07 -0.05 2.43 36.00 0.09 0.04 16 17 O -0.54 -0.35 11.49 -35.23 -0.40 -0.76 16 18 Si 0.66 0.41 30.91 -169.99 -5.25 -4.85 16 19 C -0.09 -0.12 5.95 -39.52 -0.24 -0.36 16 20 Br -0.02 0.00 30.30 -68.01 -2.06 -2.06 16 21 C -0.14 -0.16 8.77 -39.43 -0.35 -0.51 16 22 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 23 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 24 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 25 H 0.07 0.02 7.65 -51.93 -0.40 -0.38 16 26 H 0.07 0.05 7.41 -51.93 -0.38 -0.34 16 27 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 28 H 0.09 0.03 8.10 -51.93 -0.42 -0.39 16 29 H 0.38 -1.11 9.12 45.56 0.42 -0.69 16 30 H 0.09 0.08 7.92 -51.93 -0.41 -0.33 16 31 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.15 0.33 5.38 -52.49 -0.28 0.05 16 33 H 0.09 -0.03 7.18 -51.93 -0.37 -0.40 16 34 H 0.38 -1.23 8.74 45.56 0.40 -0.84 16 35 H -0.25 -0.89 7.11 56.52 0.40 -0.49 16 36 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 37 H 0.15 -0.16 6.30 -52.49 -0.33 -0.49 16 LS Contribution 326.58 15.07 4.92 4.92 Total: 0.00 -6.61 326.58 -9.40 -16.02 By element: Atomic # 1 Polarization: -4.12 SS G_CDS: -3.89 Total: -8.01 kcal Atomic # 6 Polarization: -0.08 SS G_CDS: -1.54 Total: -1.61 kcal Atomic # 8 Polarization: -2.83 SS G_CDS: -1.58 Total: -4.41 kcal Atomic # 14 Polarization: 0.41 SS G_CDS: -5.25 Total: -4.85 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -2.06 Total: -2.06 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -6.61 -9.40 -16.02 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_8663_11354858.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.187 kcal (2) G-P(sol) polarization free energy of solvation -6.613 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.800 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.404 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.017 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds