Wall clock time and date at job start Tue Mar 9 2021 19:15:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35994 * 117.00214 * 2 1 4 4 C 1.39155 * 120.06541 * 180.30297 * 3 2 1 5 5 O 1.36007 * 120.06805 * 359.97438 * 4 3 2 6 6 C 1.42893 * 117.00038 * 180.27349 * 5 4 3 7 7 C 1.53003 * 109.46942 * 179.97438 * 6 5 4 8 8 H 1.09000 * 112.84873 * 316.19561 * 7 6 5 9 9 C 1.53775 * 113.61568 * 87.50320 * 7 6 5 10 10 C 1.53777 * 87.08196 * 139.97810 * 9 7 6 11 11 H 1.09002 * 113.68744 * 89.13282 * 10 9 7 12 12 O 1.42905 * 113.61844 * 220.01906 * 10 9 7 13 13 C 1.42903 * 114.00167 * 247.50424 * 12 10 9 14 14 C 1.52999 * 109.47111 * 59.99266 * 13 12 10 15 15 C 1.52999 * 109.46971 * 179.97438 * 13 12 10 16 16 C 1.53002 * 109.46770 * 299.99670 * 13 12 10 17 17 C 1.53780 * 87.08369 * 334.56925 * 10 9 7 18 18 C 1.38560 * 119.86869 * 180.25025 * 4 3 2 19 19 C 1.38238 * 120.01046 * 359.44771 * 18 4 3 20 20 C 1.50699 * 119.93328 * 180.29753 * 19 18 4 21 21 O 1.42903 * 109.47038 * 255.00099 * 20 19 18 22 22 Si 1.86303 * 109.47261 * 135.00239 * 20 19 18 23 23 C 1.38340 * 120.13798 * 0.27992 * 19 18 4 24 24 Br 1.89097 * 119.93975 * 180.02562 * 23 19 18 25 25 C 1.38315 * 120.12315 * 359.97438 * 23 19 18 26 26 H 1.08998 * 109.47255 * 180.02562 * 1 2 3 27 27 H 1.09003 * 109.46966 * 300.00054 * 1 2 3 28 28 H 1.09000 * 109.47585 * 59.99267 * 1 2 3 29 29 H 1.09002 * 109.47252 * 299.99707 * 6 5 4 30 30 H 1.09006 * 109.47230 * 60.00094 * 6 5 4 31 31 H 1.08998 * 113.61960 * 254.53171 * 9 7 6 32 32 H 1.09007 * 113.61161 * 25.43303 * 9 7 6 33 33 H 1.08996 * 109.46654 * 60.00622 * 14 13 12 34 34 H 1.09007 * 109.46866 * 180.02562 * 14 13 12 35 35 H 1.08998 * 109.47683 * 299.99967 * 14 13 12 36 36 H 1.08996 * 109.47306 * 59.99970 * 15 13 12 37 37 H 1.09004 * 109.46501 * 180.02562 * 15 13 12 38 38 H 1.08994 * 109.46913 * 299.99105 * 15 13 12 39 39 H 1.09003 * 109.47391 * 59.99700 * 16 13 12 40 40 H 1.08998 * 109.46992 * 180.02562 * 16 13 12 41 41 H 1.09000 * 109.47036 * 300.00239 * 16 13 12 42 42 H 1.08996 * 113.61316 * 270.88201 * 17 10 9 43 43 H 1.08999 * 113.61678 * 139.98181 * 17 10 9 44 44 H 1.08002 * 119.99717 * 179.73012 * 18 4 3 45 45 H 1.08995 * 109.47189 * 15.00591 * 20 19 18 46 46 H 0.96702 * 114.00361 * 300.00103 * 21 20 19 47 47 H 1.48498 * 110.00021 * 179.97438 * 22 20 19 48 48 H 1.48499 * 110.00239 * 301.32235 * 22 20 19 49 49 H 1.07996 * 120.00393 * 180.02562 * 25 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2861 -0.0064 5 8 4.1793 0.1471 -0.0121 6 6 5.6001 0.2997 -0.0124 7 6 6.2612 -1.0801 -0.0185 8 1 5.7907 -1.7779 0.6743 9 6 6.4711 -1.6564 -1.4286 10 6 7.8346 -2.1654 -0.9323 11 1 7.7959 -3.1611 -0.4904 12 8 8.8826 -2.0254 -1.8937 13 6 9.3805 -3.2673 -2.3957 14 6 8.2445 -4.0352 -3.0745 15 6 10.4919 -2.9976 -3.4121 16 6 9.9378 -4.0985 -1.2384 17 6 7.7933 -1.0296 0.1036 18 6 4.0609 2.5227 -0.0011 19 6 3.3043 3.6797 -0.0011 20 6 3.9857 5.0238 -0.0021 21 8 3.8910 5.6069 1.2991 22 14 3.1579 6.1389 -1.2440 23 6 1.9228 3.6062 -0.0005 24 35 0.8934 5.1924 -0.0012 25 6 1.2932 2.3747 -0.0004 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3634 0.5139 -0.8899 29 1 5.9059 0.8534 -0.9001 30 1 5.9071 0.8454 0.8800 31 1 5.7733 -2.4542 -1.6827 32 1 6.5456 -0.8947 -2.2049 33 1 7.8476 -3.4431 -3.8990 34 1 8.6243 -4.9827 -3.4570 35 1 7.4525 -4.2274 -2.3507 36 1 11.3012 -2.4504 -2.9289 37 1 10.8713 -3.9449 -3.7953 38 1 10.0944 -2.4057 -4.2365 39 1 9.1457 -4.2905 -0.5145 40 1 10.3180 -5.0455 -1.6213 41 1 10.7470 -3.5514 -0.7548 42 1 8.2293 -0.0967 -0.2537 43 1 8.1629 -1.3215 1.0866 44 1 5.1392 2.5829 -0.0016 45 1 5.0351 4.8989 -0.2688 46 1 2.9835 5.7473 1.6021 47 1 3.8203 7.4679 -1.2542 48 1 3.2215 5.5286 -2.5963 49 1 0.2146 2.3196 -0.0003 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_8663_14598384.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 19:15:48 Heat of formation + Delta-G solvation = -106.280667 kcal Electronic energy + Delta-G solvation = -30045.610820 eV Core-core repulsion = 25794.204141 eV Total energy + Delta-G solvation = -4251.406680 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.097 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.94822 -40.97207 -39.66290 -39.23018 -38.15638 -36.98948 -33.96063 -33.48083 -32.23281 -30.74691 -29.29339 -28.63647 -28.42224 -28.29802 -26.67652 -26.21903 -24.45697 -22.92094 -22.62755 -20.87332 -20.68915 -19.61571 -18.59349 -18.32319 -17.70052 -17.63087 -17.30732 -16.67406 -16.50353 -16.24572 -16.02377 -15.88451 -15.74753 -15.57774 -15.13952 -14.81081 -14.56871 -14.45533 -14.09697 -13.96212 -13.81243 -13.49614 -13.40817 -13.38370 -13.28892 -13.01352 -12.92314 -12.82117 -12.69068 -12.53697 -12.50913 -12.27763 -12.19697 -12.12846 -11.99568 -11.84720 -11.74546 -11.60846 -11.37991 -11.22288 -10.45228 -10.37384 -9.93477 -8.99036 -4.55045 -0.16984 -0.03367 0.10760 1.29372 1.73895 1.92702 2.09738 2.14434 2.29545 2.70129 3.33057 3.38888 3.46611 3.50181 3.56609 3.69921 3.72260 3.82427 3.84555 3.88144 3.93159 4.02385 4.05920 4.10845 4.13251 4.15432 4.28529 4.30411 4.39642 4.46616 4.48056 4.53557 4.56558 4.61739 4.66822 4.71146 4.72940 4.74493 4.78636 4.86005 4.88723 4.96691 5.02751 5.07168 5.11040 5.23434 5.26620 5.28212 5.33983 5.88904 6.36137 6.39036 6.47589 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.298 6.298 3 C 0.108 3.892 4 C 0.132 3.868 5 O -0.294 6.294 6 C 0.067 3.933 7 C -0.108 4.108 8 H 0.106 0.894 9 C -0.148 4.148 10 C 0.062 3.938 11 H 0.093 0.907 12 O -0.362 6.362 13 C 0.105 3.895 14 C -0.176 4.176 15 C -0.139 4.139 16 C -0.179 4.179 17 C -0.127 4.127 18 C -0.154 4.154 19 C -0.071 4.071 20 C -0.057 4.057 21 O -0.530 6.530 22 Si 0.532 3.468 23 C -0.100 4.100 24 Br 0.066 6.934 25 C -0.135 4.135 26 H 0.106 0.894 27 H 0.059 0.941 28 H 0.059 0.941 29 H 0.068 0.932 30 H 0.069 0.931 31 H 0.073 0.927 32 H 0.090 0.910 33 H 0.064 0.936 34 H 0.066 0.934 35 H 0.058 0.942 36 H 0.063 0.937 37 H 0.071 0.929 38 H 0.063 0.937 39 H 0.059 0.941 40 H 0.068 0.932 41 H 0.065 0.935 42 H 0.094 0.906 43 H 0.078 0.922 44 H 0.147 0.853 45 H 0.114 0.886 46 H 0.373 0.627 47 H -0.228 1.228 48 H -0.242 1.242 49 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.769 -3.344 0.901 4.434 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.211 6.211 3 C 0.061 3.939 4 C 0.085 3.915 5 O -0.207 6.207 6 C -0.008 4.008 7 C -0.127 4.127 8 H 0.124 0.876 9 C -0.185 4.185 10 C 0.004 3.996 11 H 0.111 0.889 12 O -0.281 6.281 13 C 0.066 3.934 14 C -0.234 4.234 15 C -0.196 4.196 16 C -0.237 4.237 17 C -0.164 4.164 18 C -0.173 4.173 19 C -0.073 4.073 20 C -0.168 4.168 21 O -0.336 6.336 22 Si 0.429 3.571 23 C -0.179 4.179 24 Br 0.151 6.849 25 C -0.155 4.155 26 H 0.124 0.876 27 H 0.077 0.923 28 H 0.077 0.923 29 H 0.086 0.914 30 H 0.087 0.913 31 H 0.092 0.908 32 H 0.109 0.891 33 H 0.083 0.917 34 H 0.085 0.915 35 H 0.077 0.923 36 H 0.082 0.918 37 H 0.090 0.910 38 H 0.082 0.918 39 H 0.078 0.922 40 H 0.087 0.913 41 H 0.084 0.916 42 H 0.112 0.888 43 H 0.097 0.903 44 H 0.165 0.835 45 H 0.131 0.869 46 H 0.221 0.779 47 H -0.151 1.151 48 H -0.165 1.165 49 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -2.295 -2.527 0.044 3.414 hybrid contribution 0.501 -0.717 0.168 0.891 sum -1.794 -3.244 0.213 3.713 Atomic orbital electron populations 1.23197 0.77832 1.04759 1.01582 1.86237 1.21564 1.24754 1.88567 1.18085 0.89021 0.85248 1.01542 1.18345 0.88392 0.86269 0.98485 1.86215 1.18969 1.27633 1.87847 1.22946 0.77645 0.98371 1.01852 1.22306 0.95261 0.95815 0.99298 0.87601 1.23617 0.96961 1.01502 0.96450 1.23567 0.87218 0.98641 0.90152 0.88946 1.88036 1.52620 1.29146 1.58281 1.21542 0.93787 0.84522 0.93574 1.22471 0.98593 1.00825 1.01502 1.21770 0.97261 1.02410 0.98186 1.22472 1.01780 1.00713 0.98685 1.23237 0.93713 1.00107 0.99386 1.20913 1.00732 0.89611 1.06077 1.19877 0.91445 0.96813 0.99208 1.24847 1.04991 0.93288 0.93670 1.86531 1.32481 1.82981 1.31627 0.93603 1.00691 0.82164 0.80656 1.21111 0.93046 0.91166 1.12614 1.96269 1.64956 1.29136 1.94577 1.20897 1.00713 0.89393 1.04543 0.87608 0.92275 0.92272 0.91406 0.91328 0.90837 0.89116 0.91675 0.91520 0.92263 0.91757 0.91049 0.91774 0.92211 0.91337 0.91599 0.88790 0.90303 0.83535 0.86853 0.77895 1.15091 1.16524 0.83040 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.30 -0.54 10.28 -34.23 -0.35 -0.89 16 3 C 0.11 0.19 6.70 -39.12 -0.26 -0.07 16 4 C 0.13 0.29 6.70 -39.12 -0.26 0.03 16 5 O -0.29 -0.69 9.92 -34.27 -0.34 -1.03 16 6 C 0.07 -0.01 4.58 37.16 0.17 0.16 16 7 C -0.11 0.07 4.01 -89.81 -0.36 -0.29 16 8 H 0.11 -0.07 8.14 -51.93 -0.42 -0.49 16 9 C -0.15 0.00 7.46 -25.92 -0.19 -0.19 16 10 C 0.06 0.00 2.82 -25.92 -0.07 -0.08 16 11 H 0.09 -0.08 5.54 -51.93 -0.29 -0.36 16 12 O -0.36 -0.63 10.00 -35.23 -0.35 -0.99 16 13 C 0.10 0.03 1.11 -90.62 -0.10 -0.07 16 14 C -0.18 0.07 8.38 37.16 0.31 0.38 16 15 C -0.14 0.02 8.84 37.16 0.33 0.35 16 16 C -0.18 0.11 8.38 37.16 0.31 0.42 16 17 C -0.13 0.11 7.47 -25.92 -0.19 -0.08 16 18 C -0.15 -0.20 8.65 -39.46 -0.34 -0.55 16 19 C -0.07 -0.10 4.78 -104.58 -0.50 -0.60 16 20 C -0.06 -0.11 2.79 36.01 0.10 -0.01 16 21 O -0.53 -1.25 12.88 -35.23 -0.45 -1.70 16 22 Si 0.53 1.28 26.93 -169.99 -4.58 -3.30 16 23 C -0.10 -0.05 5.78 -39.52 -0.23 -0.27 16 24 Br 0.07 -0.09 26.04 -68.01 -1.77 -1.86 16 25 C -0.14 0.00 8.77 -39.43 -0.35 -0.35 16 26 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 27 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 28 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 29 H 0.07 -0.05 7.37 -51.93 -0.38 -0.43 16 30 H 0.07 -0.08 7.66 -51.93 -0.40 -0.47 16 31 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.09 0.06 7.90 -51.93 -0.41 -0.35 16 33 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.07 -0.08 8.14 -51.92 -0.42 -0.50 16 35 H 0.06 -0.03 7.02 -51.93 -0.36 -0.40 16 36 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 38 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 39 H 0.06 -0.06 6.24 -51.93 -0.32 -0.38 16 40 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 41 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 42 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 43 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 44 H 0.15 -0.05 6.24 -52.49 -0.33 -0.38 16 45 H 0.11 0.17 7.77 -51.93 -0.40 -0.24 16 46 H 0.37 -0.14 7.30 45.56 0.33 0.20 16 47 H -0.23 -1.14 7.11 56.52 0.40 -0.74 16 48 H -0.24 -1.18 7.11 56.52 0.40 -0.78 16 49 H 0.15 -0.37 6.30 -52.49 -0.33 -0.70 16 LS Contribution 399.64 15.07 6.02 6.02 Total: 0.00 -5.74 399.64 -10.43 -16.17 By element: Atomic # 1 Polarization: -4.19 SS G_CDS: -7.96 Total: -12.15 kcal Atomic # 6 Polarization: 0.37 SS G_CDS: -0.65 Total: -0.28 kcal Atomic # 8 Polarization: -3.12 SS G_CDS: -1.50 Total: -4.61 kcal Atomic # 14 Polarization: 1.28 SS G_CDS: -4.58 Total: -3.30 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -1.77 Total: -1.86 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -5.74 -10.43 -16.17 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_8663_14598384.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.110 kcal (2) G-P(sol) polarization free energy of solvation -5.738 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.848 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.432 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.171 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.281 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds