Wall clock time and date at job start Tue Mar 9 2021 19:16:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35997 * 117.00250 * 2 1 4 4 C 1.39144 * 120.07008 * 179.97438 * 3 2 1 5 5 O 1.36013 * 120.06255 * 359.95354 * 4 3 2 6 6 C 1.42906 * 117.00011 * 179.97438 * 5 4 3 7 7 C 1.53002 * 109.47035 * 179.97438 * 6 5 4 8 8 H 1.08995 * 112.90605 * 316.25601 * 7 6 5 9 9 C 1.53776 * 113.61151 * 87.50641 * 7 6 5 10 10 C 1.53775 * 87.08252 * 139.97896 * 9 7 6 11 11 H 1.09001 * 113.61311 * 220.01661 * 10 9 7 12 12 N 1.46505 * 113.68959 * 89.12603 * 10 9 7 13 13 C 1.34775 * 119.99729 * 107.46649 * 12 10 9 14 14 O 1.21501 * 120.00421 * 359.97438 * 13 12 10 15 15 O 1.34638 * 119.99735 * 179.97438 * 13 12 10 16 16 C 1.45197 * 117.00010 * 180.02562 * 15 13 12 17 17 C 1.52997 * 109.47085 * 59.99960 * 16 15 13 18 18 C 1.53008 * 109.47197 * 179.97438 * 16 15 13 19 19 C 1.53002 * 109.47173 * 299.99666 * 16 15 13 20 20 C 1.53778 * 113.61176 * 185.00326 * 7 6 5 21 21 C 1.38558 * 119.87686 * 180.23098 * 4 3 2 22 22 C 1.38245 * 120.00595 * 359.51181 * 21 4 3 23 23 C 1.50693 * 119.93397 * 180.23326 * 22 21 4 24 24 O 1.42904 * 109.47257 * 343.69203 * 23 22 21 25 25 Si 1.86307 * 109.47229 * 103.69043 * 23 22 21 26 26 C 1.38330 * 120.13288 * 0.46595 * 22 21 4 27 27 Br 1.89106 * 119.93362 * 179.76655 * 26 22 21 28 28 C 1.38315 * 120.13233 * 359.79010 * 26 22 21 29 29 H 1.09004 * 109.47099 * 60.00271 * 1 2 3 30 30 H 1.08998 * 109.47481 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.47438 * 300.00670 * 1 2 3 32 32 H 1.09001 * 109.46804 * 59.99961 * 6 5 4 33 33 H 1.08993 * 109.47088 * 299.99950 * 6 5 4 34 34 H 1.09002 * 113.61790 * 25.42631 * 9 7 6 35 35 H 1.09001 * 113.69111 * 254.54424 * 9 7 6 36 36 H 0.97003 * 119.99626 * 287.46438 * 12 10 9 37 37 H 1.09001 * 109.47591 * 60.00231 * 17 16 15 38 38 H 1.09008 * 109.46931 * 179.97438 * 17 16 15 39 39 H 1.08994 * 109.47387 * 299.99735 * 17 16 15 40 40 H 1.09004 * 109.46917 * 60.00199 * 18 16 15 41 41 H 1.08994 * 109.47085 * 179.97438 * 18 16 15 42 42 H 1.08996 * 109.47321 * 300.00055 * 18 16 15 43 43 H 1.09006 * 109.46658 * 60.00221 * 19 16 15 44 44 H 1.08998 * 109.47217 * 179.97438 * 19 16 15 45 45 H 1.08994 * 109.47002 * 300.00409 * 19 16 15 46 46 H 1.08994 * 113.61815 * 105.47292 * 20 7 6 47 47 H 1.08999 * 113.61297 * 334.56321 * 20 7 6 48 48 H 1.08001 * 119.99808 * 179.74744 * 21 4 3 49 49 H 1.09001 * 109.47781 * 223.69192 * 23 22 21 50 50 H 0.96701 * 114.00075 * 179.97438 * 24 23 22 51 51 H 1.48497 * 109.99860 * 305.31586 * 25 23 22 52 52 H 1.48497 * 109.99917 * 66.63435 * 25 23 22 53 53 H 1.08002 * 120.01085 * 179.97438 * 28 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2862 0.0005 5 8 4.1792 0.1472 0.0020 6 6 5.6001 0.2998 0.0019 7 6 6.2612 -1.0801 0.0043 8 1 5.7903 -1.7749 0.6997 9 6 6.4722 -1.6644 -1.4023 10 6 7.8354 -2.1706 -0.9020 11 1 8.6352 -2.0680 -1.6354 12 7 7.7829 -3.5053 -0.3003 13 6 8.2994 -4.5619 -0.9585 14 8 8.8082 -4.4077 -2.0510 15 8 8.2517 -5.7885 -0.4053 16 6 8.8278 -6.8797 -1.1706 17 6 10.3108 -6.5993 -1.4215 18 6 8.6817 -8.1854 -0.3865 19 6 8.0986 -7.0041 -2.5099 20 6 7.7932 -1.0288 0.1273 21 6 4.0608 2.5228 0.0054 22 6 3.3041 3.6798 -0.0005 23 6 3.9855 5.0239 -0.0006 24 8 5.3526 4.8650 0.3841 25 14 3.9030 5.7620 -1.7092 26 6 1.9228 3.6062 -0.0016 27 35 0.8933 5.1925 -0.0030 28 6 1.2931 2.3747 -0.0011 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3634 0.5139 0.8899 32 1 5.9064 0.8506 0.8913 33 1 5.9065 0.8483 -0.8887 34 1 6.5473 -0.9073 -2.1830 35 1 5.7750 -2.4637 -1.6537 36 1 7.3764 -3.6285 0.5718 37 1 10.8304 -6.5107 -0.4674 38 1 10.7434 -7.4187 -1.9957 39 1 10.4154 -5.6691 -1.9799 40 1 7.6252 -8.3854 -0.2075 41 1 9.1138 -9.0046 -0.9612 42 1 9.2015 -8.0966 0.5674 43 1 8.2031 -6.0738 -3.0683 44 1 8.5314 -7.8229 -3.0846 45 1 7.0421 -7.2038 -2.3311 46 1 8.1620 -1.3150 1.1122 47 1 8.2294 -0.0980 -0.2352 48 1 5.1391 2.5829 0.0099 49 1 3.4840 5.6856 0.7056 50 1 5.8538 5.6916 0.4055 51 1 4.4689 4.8122 -2.7006 52 1 2.4950 6.0806 -2.0574 53 1 0.2145 2.3195 -0.0014 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_8663_15734082.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 19:16:51 Heat of formation + Delta-G solvation = -123.634591 kcal Electronic energy + Delta-G solvation = -35651.429068 eV Core-core repulsion = 30731.398003 eV Total energy + Delta-G solvation = -4920.031065 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 444.107 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.06494 -41.86626 -40.61330 -39.49868 -38.97115 -37.88782 -37.15609 -35.40542 -34.18065 -33.13344 -32.21955 -30.55761 -29.24557 -28.65445 -28.40207 -28.33257 -26.77839 -26.20884 -24.91563 -23.66065 -22.84650 -22.44343 -21.20448 -20.35994 -19.62331 -19.37423 -18.75413 -18.25052 -17.66154 -17.48853 -17.26743 -17.22418 -16.73283 -16.40094 -16.29189 -16.10653 -16.04564 -15.82573 -15.56204 -15.41285 -15.04507 -14.87874 -14.48217 -14.36905 -14.27465 -13.96793 -13.77565 -13.59782 -13.44873 -13.37962 -13.17179 -12.95958 -12.93603 -12.90295 -12.84708 -12.65235 -12.54308 -12.39020 -12.35403 -12.21554 -12.06134 -11.91697 -11.69418 -11.44479 -11.43159 -11.28542 -11.18639 -11.15936 -10.53067 -10.23751 -9.85359 -8.96581 -5.06332 -0.20407 -0.08916 0.33953 1.08825 1.27524 1.64729 1.67725 1.95877 2.00022 2.11882 2.27439 3.06655 3.09959 3.34784 3.40134 3.45976 3.62721 3.70651 3.71561 3.73477 3.77288 3.87974 3.91026 4.06162 4.16922 4.17904 4.27132 4.29399 4.33755 4.38573 4.41087 4.44104 4.53901 4.57452 4.58245 4.65886 4.68117 4.69700 4.71263 4.73172 4.79513 4.84391 4.85628 4.92978 4.98873 5.01370 5.03382 5.13350 5.23798 5.24216 5.28543 5.43372 5.57097 5.88738 6.32879 6.34088 6.86706 7.28284 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.320 6.320 3 C 0.089 3.911 4 C 0.109 3.891 5 O -0.313 6.313 6 C 0.061 3.939 7 C -0.103 4.103 8 H 0.101 0.899 9 C -0.148 4.148 10 C 0.132 3.868 11 H 0.099 0.901 12 N -0.684 5.684 13 C 0.646 3.354 14 O -0.592 6.592 15 O -0.370 6.370 16 C 0.127 3.873 17 C -0.180 4.180 18 C -0.138 4.138 19 C -0.180 4.180 20 C -0.116 4.116 21 C -0.153 4.153 22 C -0.059 4.059 23 C -0.068 4.068 24 O -0.556 6.556 25 Si 0.750 3.250 26 C -0.109 4.109 27 Br -0.029 7.029 28 C -0.142 4.142 29 H 0.065 0.935 30 H 0.119 0.881 31 H 0.068 0.932 32 H 0.080 0.920 33 H 0.074 0.926 34 H 0.100 0.900 35 H 0.058 0.942 36 H 0.416 0.584 37 H 0.063 0.937 38 H 0.087 0.913 39 H 0.063 0.937 40 H 0.068 0.932 41 H 0.099 0.901 42 H 0.070 0.930 43 H 0.063 0.937 44 H 0.088 0.912 45 H 0.060 0.940 46 H 0.095 0.905 47 H 0.120 0.880 48 H 0.165 0.835 49 H 0.097 0.903 50 H 0.409 0.591 51 H -0.304 1.304 52 H -0.257 1.257 53 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.070 3.054 3.091 4.476 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.234 6.234 3 C 0.042 3.958 4 C 0.062 3.938 5 O -0.227 6.227 6 C -0.014 4.014 7 C -0.122 4.122 8 H 0.119 0.881 9 C -0.186 4.186 10 C 0.028 3.972 11 H 0.117 0.883 12 N -0.344 5.344 13 C 0.400 3.600 14 O -0.483 6.483 15 O -0.284 6.284 16 C 0.091 3.909 17 C -0.237 4.237 18 C -0.195 4.195 19 C -0.238 4.238 20 C -0.153 4.153 21 C -0.172 4.172 22 C -0.062 4.062 23 C -0.177 4.177 24 O -0.366 6.366 25 Si 0.653 3.347 26 C -0.189 4.189 27 Br 0.057 6.943 28 C -0.162 4.162 29 H 0.084 0.916 30 H 0.137 0.863 31 H 0.087 0.913 32 H 0.098 0.902 33 H 0.092 0.908 34 H 0.118 0.882 35 H 0.077 0.923 36 H 0.253 0.747 37 H 0.082 0.918 38 H 0.106 0.894 39 H 0.082 0.918 40 H 0.087 0.913 41 H 0.118 0.882 42 H 0.089 0.911 43 H 0.082 0.918 44 H 0.107 0.893 45 H 0.079 0.921 46 H 0.114 0.886 47 H 0.139 0.861 48 H 0.183 0.817 49 H 0.115 0.885 50 H 0.261 0.739 51 H -0.232 1.232 52 H -0.182 1.182 53 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 0.480 2.535 1.797 3.144 hybrid contribution -0.592 -0.682 0.478 1.022 sum -0.112 1.853 2.275 2.936 Atomic orbital electron populations 1.23414 0.76302 1.05889 1.02390 1.86185 1.23344 1.25187 1.88726 1.18363 0.89475 0.85611 1.02315 1.18553 0.88615 0.86757 0.99849 1.86184 1.20330 1.27969 1.88221 1.23148 0.76555 0.98916 1.02750 1.22605 0.96062 0.95190 0.98311 0.88070 1.23568 0.96868 1.00885 0.97325 1.21824 0.98700 0.79604 0.97066 0.88333 1.44382 1.61980 1.04923 1.23078 1.18303 0.77661 0.81425 0.82627 1.90901 1.50195 1.85536 1.21638 1.86312 1.76155 1.15697 1.50262 1.22374 0.93122 0.84064 0.91387 1.22471 0.94161 1.04105 1.02931 1.21894 1.03713 0.92969 1.00886 1.22476 1.00642 1.04026 0.96614 1.23322 0.93192 0.98507 1.00328 1.21016 1.02006 0.89077 1.05121 1.19233 0.91197 0.95840 0.99908 1.24764 0.85765 0.95406 1.11726 1.86309 1.19763 1.38756 1.91811 0.95184 0.82567 0.84540 0.72459 1.21279 0.93324 0.92724 1.11532 1.96715 1.69940 1.30185 1.97506 1.21098 1.01349 0.89227 1.04552 0.91633 0.86274 0.91336 0.90171 0.90814 0.88178 0.92305 0.74670 0.91812 0.89399 0.91768 0.91305 0.88222 0.91067 0.91847 0.89346 0.92123 0.88597 0.86131 0.81728 0.88537 0.73909 1.23209 1.18151 0.81867 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.32 -2.43 10.28 -79.63 -0.82 -3.25 16 3 C 0.09 0.70 6.70 22.57 0.15 0.85 16 4 C 0.11 0.86 6.70 22.56 0.15 1.01 16 5 O -0.31 -2.23 9.92 -79.82 -0.79 -3.03 16 6 C 0.06 -0.02 4.58 71.98 0.33 0.31 16 7 C -0.10 0.25 3.89 -10.27 -0.04 0.21 16 8 H 0.10 -0.17 8.14 -2.39 -0.02 -0.19 16 9 C -0.15 -0.04 7.43 31.12 0.23 0.19 16 10 C 0.13 -0.04 4.32 45.52 0.20 0.15 16 11 H 0.10 0.26 7.46 -2.39 -0.02 0.24 16 12 N -0.68 -1.14 5.27 -567.61 -2.99 -4.13 16 13 C 0.65 5.09 8.06 129.79 1.05 6.14 16 14 O -0.59 -7.74 11.48 19.84 0.23 -7.51 16 15 O -0.37 -2.45 9.94 -55.47 -0.55 -3.00 16 16 C 0.13 0.49 1.13 -10.79 -0.01 0.48 16 17 C -0.18 -0.68 8.37 71.98 0.60 -0.07 16 18 C -0.14 0.18 8.85 71.98 0.64 0.82 16 19 C -0.18 -0.80 8.37 71.98 0.60 -0.20 16 20 C -0.12 0.69 7.39 31.12 0.23 0.92 16 21 C -0.15 -0.85 8.35 22.35 0.19 -0.66 16 22 C -0.06 -0.30 4.49 -19.84 -0.09 -0.39 16 23 C -0.07 0.03 2.43 71.23 0.17 0.21 16 24 O -0.56 1.79 11.50 -148.98 -1.71 0.07 16 25 Si 0.75 -0.71 31.38 68.60 2.15 1.44 16 26 C -0.11 -0.59 5.96 22.31 0.13 -0.45 16 27 Br -0.03 -0.09 29.83 -20.37 -0.61 -0.70 16 28 C -0.14 -0.70 8.77 22.37 0.20 -0.51 16 29 H 0.07 -0.19 7.66 -2.38 -0.02 -0.21 16 30 H 0.12 -0.52 8.14 -2.39 -0.02 -0.54 16 31 H 0.07 -0.23 7.66 -2.39 -0.02 -0.25 16 32 H 0.08 -0.21 7.65 -2.39 -0.02 -0.23 16 33 H 0.07 -0.13 7.38 -2.39 -0.02 -0.15 16 34 H 0.10 -0.07 7.90 -2.39 -0.02 -0.09 16 35 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 36 H 0.42 -1.03 8.81 -92.71 -0.82 -1.85 16 37 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 38 H 0.09 0.02 8.14 -2.38 -0.02 0.00 16 39 H 0.06 0.58 5.88 -2.39 -0.01 0.57 16 40 H 0.07 -0.09 8.14 -2.38 -0.02 -0.11 16 41 H 0.10 -0.47 8.14 -2.39 -0.02 -0.49 16 42 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 43 H 0.06 0.63 5.88 -2.38 -0.01 0.61 16 44 H 0.09 0.07 8.14 -2.39 -0.02 0.05 16 45 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 46 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 47 H 0.12 -1.06 8.10 -2.39 -0.02 -1.08 16 48 H 0.17 0.42 5.39 -2.91 -0.02 0.41 16 49 H 0.10 -0.25 7.13 -2.39 -0.02 -0.27 16 50 H 0.41 -5.48 8.74 -74.06 -0.65 -6.13 16 51 H -0.30 -2.27 7.11 99.48 0.71 -1.57 16 52 H -0.26 -0.82 6.28 99.48 0.63 -0.19 16 53 H 0.16 0.10 6.30 -2.91 -0.02 0.08 16 Total: 0.00 -21.87 440.11 0.19 -21.68 By element: Atomic # 1 Polarization: -11.12 SS G_CDS: -0.55 Total: -11.67 kcal Atomic # 6 Polarization: 4.26 SS G_CDS: 5.84 Total: 10.09 kcal Atomic # 7 Polarization: -1.14 SS G_CDS: -2.99 Total: -4.13 kcal Atomic # 8 Polarization: -13.07 SS G_CDS: -3.65 Total: -16.72 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: 2.15 Total: 1.44 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -0.61 Total: -0.70 kcal Total: -21.87 0.19 -21.68 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_8663_15734082.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.956 kcal (2) G-P(sol) polarization free energy of solvation -21.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.824 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.189 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.679 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.635 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds