Wall clock time and date at job start Tue Mar 9 2021 19:16:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35994 * 116.99818 * 2 1 4 4 C 1.39147 * 120.06999 * 180.02562 * 3 2 1 5 5 O 1.36018 * 120.06234 * 359.97438 * 4 3 2 6 6 C 1.42900 * 116.99911 * 179.97438 * 5 4 3 7 7 C 1.53006 * 109.46750 * 179.97438 * 6 5 4 8 8 H 1.09003 * 109.46662 * 55.00520 * 7 6 5 9 9 C 1.52996 * 109.46876 * 175.00221 * 7 6 5 10 10 C 1.52999 * 109.47182 * 180.02562 * 9 7 6 11 11 C 1.53001 * 109.46906 * 300.00001 * 10 9 7 12 12 H 1.08996 * 109.47072 * 299.99687 * 11 10 9 13 13 O 1.42905 * 109.46821 * 179.97438 * 11 10 9 14 14 C 1.52996 * 109.47201 * 60.00011 * 11 10 9 15 15 C 1.52992 * 109.47427 * 295.00493 * 7 6 5 16 16 C 1.38553 * 119.87675 * 179.97438 * 4 3 2 17 17 C 1.38234 * 120.00858 * 359.97186 * 16 4 3 18 18 C 1.50708 * 119.93307 * 180.02562 * 17 16 4 19 19 O 1.42901 * 109.47305 * 255.37241 * 18 17 16 20 20 Si 1.86293 * 109.47017 * 15.37421 * 18 17 16 21 21 C 1.38338 * 120.13723 * 0.30471 * 17 16 4 22 22 Br 1.89097 * 119.93763 * 179.70033 * 21 17 16 23 23 C 1.38318 * 120.12341 * 359.44266 * 21 17 16 24 24 H 1.08994 * 109.47231 * 60.00633 * 1 2 3 25 25 H 1.09008 * 109.46833 * 180.02562 * 1 2 3 26 26 H 1.08996 * 109.47437 * 300.00077 * 1 2 3 27 27 H 1.08998 * 109.47545 * 300.00006 * 6 5 4 28 28 H 1.08998 * 109.46473 * 60.00474 * 6 5 4 29 29 H 1.09006 * 109.47419 * 300.00524 * 9 7 6 30 30 H 1.08996 * 109.47372 * 60.00319 * 9 7 6 31 31 H 1.09003 * 109.46802 * 60.00026 * 10 9 7 32 32 H 1.08998 * 109.47425 * 180.02562 * 10 9 7 33 33 H 0.96703 * 113.99764 * 179.97438 * 13 11 10 34 34 H 1.09003 * 109.47231 * 59.99531 * 14 11 10 35 35 H 1.08997 * 109.47580 * 179.97438 * 14 11 10 36 36 H 1.09004 * 109.47263 * 300.00240 * 15 7 6 37 37 H 1.08998 * 109.47490 * 59.99661 * 15 7 6 38 38 H 1.08002 * 119.99688 * 180.02562 * 16 4 3 39 39 H 1.09000 * 109.46555 * 135.37512 * 18 17 16 40 40 H 0.96695 * 113.99843 * 59.99446 * 19 18 17 41 41 H 1.48500 * 109.99993 * 65.27118 * 20 18 17 42 42 H 1.48496 * 109.99936 * 186.59451 * 20 18 17 43 43 H 1.07999 * 120.00685 * 180.25803 * 23 21 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1793 0.1473 -0.0005 6 6 5.6001 0.3000 -0.0017 7 6 6.2613 -1.0798 -0.0009 8 1 5.8862 -1.6629 -0.8420 9 6 7.7775 -0.9188 -0.1277 10 6 8.4387 -2.2986 -0.1276 11 6 8.1102 -3.0213 1.1804 12 1 8.4854 -2.4385 2.0216 13 8 8.7273 -4.3102 1.1803 14 6 6.5940 -3.1823 1.3073 15 6 5.9328 -1.8020 1.3073 16 6 4.0607 2.5230 -0.0011 17 6 3.3040 3.6798 -0.0017 18 6 3.9854 5.0241 -0.0028 19 8 3.8977 5.6037 1.3004 20 14 5.7766 4.8119 -0.4689 21 6 1.9226 3.6063 0.0046 22 35 0.8931 5.1924 0.0124 23 6 1.2930 2.3747 -0.0001 24 1 -0.3633 0.5137 -0.8900 25 1 -0.3633 -1.0278 0.0005 26 1 -0.3634 0.5138 0.8899 27 1 5.9059 0.8493 -0.8921 28 1 5.9070 0.8501 0.8879 29 1 8.0116 -0.4042 -1.0597 30 1 8.1526 -0.3357 0.7133 31 1 8.0635 -2.8813 -0.9689 32 1 9.5189 -2.1839 -0.2175 33 1 8.5614 -4.8258 1.9815 34 1 6.2188 -3.7650 0.4660 35 1 6.3600 -3.6975 2.2388 36 1 6.3079 -1.2189 2.1484 37 1 4.8527 -1.9167 1.3977 38 1 5.1390 2.5831 -0.0019 39 1 3.4970 5.6782 -0.7251 40 1 4.3124 5.0742 1.9951 41 1 5.8833 4.3293 -1.8692 42 1 6.4964 6.1022 -0.3200 43 1 0.2144 2.3194 0.0007 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_8663_16737254.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 19:16:59 Heat of formation + Delta-G solvation = -134.764468 kcal Electronic energy + Delta-G solvation = -26487.939413 eV Core-core repulsion = 22546.372821 eV Total energy + Delta-G solvation = -3941.566592 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.066 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.91239 -40.41437 -39.43455 -39.00921 -37.13117 -36.63859 -33.02106 -32.35905 -31.88546 -31.70536 -29.93572 -28.63433 -26.95142 -26.01302 -23.90095 -23.61959 -22.60619 -22.08603 -20.94006 -19.70085 -18.55566 -18.21314 -18.08685 -17.51582 -17.28526 -16.71195 -16.34408 -16.27041 -15.92617 -15.85970 -15.55930 -15.51368 -14.83089 -14.79190 -14.37192 -14.24791 -13.99954 -13.68915 -13.64633 -13.38204 -13.27883 -12.96512 -12.81381 -12.50019 -12.36444 -12.27356 -12.21006 -12.11174 -12.06639 -11.68171 -11.66785 -11.22484 -11.15060 -11.05187 -10.74285 -10.50318 -9.91623 -8.92316 -5.16003 -0.07797 -0.00428 0.64325 1.17369 1.55310 1.90299 1.95882 2.11641 2.30120 3.12528 3.33224 3.42861 3.53960 3.56643 3.64255 3.69643 3.86470 3.93218 4.00534 4.03900 4.12064 4.15194 4.18931 4.25522 4.27066 4.27292 4.37248 4.38816 4.41373 4.49184 4.51795 4.66298 4.69384 4.74579 4.89260 4.98948 5.01463 5.03442 5.09763 5.10484 5.22524 5.29448 5.36516 5.90229 6.38436 6.52828 6.68932 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.299 6.299 3 C 0.112 3.888 4 C 0.127 3.873 5 O -0.294 6.294 6 C 0.055 3.945 7 C -0.087 4.087 8 H 0.086 0.914 9 C -0.111 4.111 10 C -0.112 4.112 11 C 0.103 3.897 12 H 0.055 0.945 13 O -0.570 6.570 14 C -0.152 4.152 15 C -0.111 4.111 16 C -0.165 4.165 17 C -0.088 4.088 18 C -0.068 4.068 19 O -0.526 6.526 20 Si 0.671 3.329 21 C -0.067 4.067 22 Br -0.032 7.032 23 C -0.147 4.147 24 H 0.058 0.942 25 H 0.105 0.895 26 H 0.058 0.942 27 H 0.067 0.933 28 H 0.069 0.931 29 H 0.074 0.926 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.073 0.927 33 H 0.379 0.621 34 H 0.072 0.928 35 H 0.066 0.934 36 H 0.065 0.935 37 H 0.076 0.924 38 H 0.147 0.853 39 H 0.120 0.880 40 H 0.377 0.623 41 H -0.251 1.251 42 H -0.246 1.246 43 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.928 -2.296 2.165 3.289 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.212 6.212 3 C 0.065 3.935 4 C 0.080 3.920 5 O -0.207 6.207 6 C -0.020 4.020 7 C -0.105 4.105 8 H 0.104 0.896 9 C -0.148 4.148 10 C -0.149 4.149 11 C 0.044 3.956 12 H 0.073 0.927 13 O -0.375 6.375 14 C -0.190 4.190 15 C -0.149 4.149 16 C -0.184 4.184 17 C -0.091 4.091 18 C -0.179 4.179 19 O -0.331 6.331 20 Si 0.572 3.428 21 C -0.147 4.147 22 Br 0.054 6.946 23 C -0.167 4.167 24 H 0.076 0.924 25 H 0.124 0.876 26 H 0.077 0.923 27 H 0.085 0.915 28 H 0.087 0.913 29 H 0.093 0.907 30 H 0.089 0.911 31 H 0.090 0.910 32 H 0.092 0.908 33 H 0.226 0.774 34 H 0.090 0.910 35 H 0.085 0.915 36 H 0.083 0.917 37 H 0.094 0.906 38 H 0.164 0.836 39 H 0.137 0.863 40 H 0.223 0.777 41 H -0.176 1.176 42 H -0.170 1.170 43 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 1.105 -1.178 0.701 1.761 hybrid contribution -0.851 -0.069 0.393 0.940 sum 0.254 -1.247 1.094 1.679 Atomic orbital electron populations 1.23182 0.77863 1.04663 1.01573 1.86221 1.21535 1.24921 1.88513 1.18144 0.89070 0.85235 1.01024 1.18149 0.88241 0.86018 0.99554 1.86213 1.18789 1.27549 1.88129 1.23059 0.77996 0.99068 1.01893 1.21219 0.94949 0.94319 1.00052 0.89589 1.21490 0.93151 0.97163 1.03023 1.21440 1.01319 0.95082 0.97068 1.21853 0.91382 0.84314 0.98066 0.92685 1.86520 1.76132 1.29458 1.45432 1.22285 0.95953 0.97966 1.02802 1.21522 1.01545 0.95243 0.96566 1.20791 0.99575 0.90387 1.07670 1.19926 0.92159 0.95805 1.01217 1.25111 1.10530 0.92334 0.89960 1.86589 1.82029 1.48733 1.15733 0.95332 0.77033 0.85515 0.84960 1.21310 0.93509 0.92192 1.07724 1.96773 1.69449 1.30935 1.97462 1.21046 1.00683 0.89848 1.05156 0.92373 0.87618 0.92328 0.91510 0.91252 0.90691 0.91060 0.90959 0.90812 0.77385 0.90961 0.91541 0.91675 0.90564 0.83579 0.86266 0.77653 1.17573 1.17035 0.83495 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.30 -0.56 10.28 -34.24 -0.35 -0.91 16 3 C 0.11 0.19 6.70 -39.12 -0.26 -0.07 16 4 C 0.13 0.14 6.70 -39.13 -0.26 -0.12 16 5 O -0.29 -0.27 9.46 -34.31 -0.32 -0.60 16 6 C 0.05 -0.12 4.12 37.16 0.15 0.04 16 7 C -0.09 0.18 2.43 -90.62 -0.22 -0.04 16 8 H 0.09 -0.08 8.14 -51.93 -0.42 -0.51 16 9 C -0.11 0.32 5.20 -26.73 -0.14 0.18 16 10 C -0.11 0.12 5.57 -26.73 -0.15 -0.03 16 11 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 12 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 13 O -0.57 -0.35 13.32 -35.23 -0.47 -0.82 16 14 C -0.15 0.21 5.55 -26.71 -0.15 0.06 16 15 C -0.11 0.18 5.10 -26.71 -0.14 0.05 16 16 C -0.17 0.09 7.64 -39.47 -0.30 -0.21 16 17 C -0.09 -0.05 5.26 -104.58 -0.55 -0.60 16 18 C -0.07 -0.01 2.02 36.01 0.07 0.06 16 19 O -0.53 -0.15 12.70 -35.23 -0.45 -0.60 16 20 Si 0.67 -0.81 29.92 -169.99 -5.09 -5.90 16 21 C -0.07 -0.11 6.22 -39.52 -0.25 -0.35 16 22 Br -0.03 -0.07 31.96 -68.01 -2.17 -2.24 16 23 C -0.15 -0.15 8.77 -39.43 -0.35 -0.49 16 24 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 25 H 0.11 -0.33 8.14 -51.92 -0.42 -0.75 16 26 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 27 H 0.07 -0.21 7.66 -51.93 -0.40 -0.61 16 28 H 0.07 -0.27 7.66 -51.93 -0.40 -0.67 16 29 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 30 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 31 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.38 -1.20 9.08 45.56 0.41 -0.78 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.06 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.08 -0.02 7.82 -51.93 -0.41 -0.43 16 38 H 0.15 -0.47 3.37 -52.49 -0.18 -0.65 16 39 H 0.12 0.15 7.21 -51.93 -0.37 -0.22 16 40 H 0.38 -1.36 8.70 45.56 0.40 -0.97 16 41 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 42 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 43 H 0.15 -0.09 6.30 -52.49 -0.33 -0.42 16 LS Contribution 360.96 15.07 5.44 5.44 Total: 0.00 -7.23 360.96 -10.54 -17.77 By element: Atomic # 1 Polarization: -5.89 SS G_CDS: -5.49 Total: -11.38 kcal Atomic # 6 Polarization: 0.88 SS G_CDS: -1.64 Total: -0.76 kcal Atomic # 8 Polarization: -1.34 SS G_CDS: -1.59 Total: -2.93 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.09 Total: -5.90 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.17 Total: -2.24 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -7.23 -10.54 -17.77 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_8663_16737254.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.996 kcal (2) G-P(sol) polarization free energy of solvation -7.227 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.222 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.542 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.769 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.764 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds