corina     4.2.0 0026  27.09.2018  xiaobo    26. 03. 2020 16:11  n-0-136.cluster.ucsf.bkslab.org

Input file type  SMILES
Output file type SYBYL MOL2

INFORMATION corina(): Annual license expires on August 9, 2022

Options:
   Writing added hydrogen atoms
   Generating multiple ring conformations
      Generating a maximum of 1 ring conformations
      Inverting flippy ring nitrogen atoms
      Applying an energy window of 6.0 kJ/mol
      Setting RMS for similar conformations set to 0.30 A
   Canonicalizing molecules before 3D generation
   Max. atoms per fragment: 999

Standard values, version 3.4 January, 2006 
Ring templates, version 3.0 March, 2001 
Torsion angle library version December, 1999 (1088 patterns), all rights CCDC, Cambridge, UK
International Chemical Identifier (InChI) Software version 1.05 (January 2017), copyright (C) IUPAC and InChI Trust Limited

*** RECORD no.:  1 read ***********************
   Name ZINC001142695708
   31 atoms
INFORMATION gen3d(): 0 flexible ring system(s)
INFORMATION gen3d(): 1 possible conformation(s)
INFORMATION gen3d(): 1 conformation(s) cached

WARNING rrefine(): 25 pair(s) of crowded atoms
ERROR quality(): Bad contacts detected
ERROR gen3d(): 3D structure didn't pass the quality check
WARNING gen3d(): Re-ordering CT to build 3D structure (2).
INFORMATION gen3d(): 0 flexible ring system(s)
INFORMATION gen3d(): 1 possible conformation(s)
INFORMATION gen3d(): 1 conformation(s) cached

WARNING rrefine(): 25 pair(s) of crowded atoms
ERROR quality(): Bad contacts detected
ERROR gen3d(): 3D structure didn't pass the quality check
WARNING gen3d(): Re-ordering CT to build 3D structure (3).
INFORMATION gen3d(): 0 flexible ring system(s)
INFORMATION gen3d(): 1 possible conformation(s)
INFORMATION gen3d(): 1 conformation(s) cached

WARNING rrefine(): 23 pair(s) of crowded atoms
ERROR quality(): Bad contacts detected
ERROR gen3d(): 3D structure didn't pass the quality check
WARNING gen3d(): Re-ordering CT to build 3D structure (4).
INFORMATION gen3d(): 0 flexible ring system(s)
INFORMATION gen3d(): 1 possible conformation(s)
INFORMATION gen3d(): 1 conformation(s) cached

WARNING rrefine(): 22 pair(s) of crowded atoms
ERROR quality(): Bad contacts detected
ERROR gen3d(): 3D structure didn't pass the quality check
WARNING gen3d(): Re-ordering CT to build 3D structure (5).
INFORMATION gen3d(): 0 flexible ring system(s)
INFORMATION gen3d(): 1 possible conformation(s)
INFORMATION gen3d(): 1 conformation(s) cached

WARNING rrefine(): 26 pair(s) of crowded atoms
ERROR quality(): Bad contacts detected
ERROR gen3d(): 3D structure didn't pass the quality check
WARNING gen3d(): Re-ordering CT to build 3D structure (6).
INFORMATION gen3d(): 0 flexible ring system(s)
INFORMATION gen3d(): 1 possible conformation(s)
INFORMATION gen3d(): 1 conformation(s) cached

WARNING rrefine(): 25 pair(s) of crowded atoms
ERROR quality(): Bad contacts detected
ERROR gen3d(): 3D structure didn't pass the quality check
WARNING gen3d(): Re-ordering CT to build 3D structure (7).
INFORMATION gen3d(): 0 flexible ring system(s)
INFORMATION gen3d(): 1 possible conformation(s)
INFORMATION gen3d(): 1 conformation(s) cached

WARNING rrefine(): 22 pair(s) of crowded atoms
ERROR quality(): Bad contacts detected
ERROR gen3d(): 3D structure didn't pass the quality check
WARNING gen3d(): Re-ordering CT to build 3D structure (8).
INFORMATION gen3d(): 0 flexible ring system(s)
INFORMATION gen3d(): 1 possible conformation(s)
INFORMATION gen3d(): 1 conformation(s) cached

WARNING rrefine(): 25 pair(s) of crowded atoms
ERROR quality(): Bad contacts detected
ERROR gen3d(): 3D structure didn't pass the quality check
WARNING gen3d(): Re-ordering CT to build 3D structure (9).
INFORMATION gen3d(): 0 flexible ring system(s)
INFORMATION gen3d(): 1 possible conformation(s)
INFORMATION gen3d(): 1 conformation(s) cached

WARNING rrefine(): 26 pair(s) of crowded atoms
ERROR quality(): Bad contacts detected
ERROR gen3d(): 3D structure didn't pass the quality check
WARNING gen3d(): Re-ordering CT to build 3D structure (10).
INFORMATION gen3d(): 0 flexible ring system(s)
INFORMATION gen3d(): 1 possible conformation(s)
INFORMATION gen3d(): 1 conformation(s) cached

WARNING rrefine(): 25 pair(s) of crowded atoms
ERROR quality(): Bad contacts detected
ERROR gen3d(): 3D structure didn't pass the quality check
   Elapsed time: 140 ms

1 record(s) read, 0 converted
   1 corina error(s)
   Totally elapsed time: 0 s
INFORMATION corina: Statistics over multiple ring conformer generation