Wall clock time and date at job start Thu Mar 26 2020 14:59:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.52999 * 108.93780 * 2 1 4 4 C 1.53235 * 108.96567 * 241.35845 * 2 1 3 5 5 S 1.81961 * 104.47471 * 239.07979 * 4 2 1 6 6 C 1.76675 * 96.21271 * 0.31154 * 5 4 2 7 7 N 1.30279 * 125.35452 * 179.97438 * 6 5 4 8 8 C 1.46498 * 120.00186 * 156.71403 * 7 6 5 9 9 C 1.50693 * 109.47139 * 237.67444 * 8 7 6 10 10 C 1.38236 * 120.00064 * 91.84118 * 9 8 7 11 11 C 1.38237 * 120.00148 * 180.25236 * 10 9 8 12 12 C 1.38233 * 119.99782 * 359.51000 * 11 10 9 13 13 C 1.38240 * 120.00064 * 0.46573 * 12 11 10 14 14 C 1.38235 * 120.00045 * 271.81423 * 9 8 7 15 15 N 1.36618 * 109.28933 * 359.67385 * 6 5 4 16 16 C 1.34773 * 121.03255 * 180.26621 * 15 6 5 17 17 O 1.21263 * 119.99933 * 175.54842 * 16 15 6 18 18 C 1.50695 * 120.00352 * 355.54372 * 16 15 6 19 19 O 1.42894 * 109.47476 * 199.57133 * 18 16 15 20 20 Si 1.50088 * 142.49768 * 320.89231 * 8 7 6 21 21 H 1.48495 * 167.99185 * 98.67771 * 20 8 7 22 22 H 1.28486 * 81.93213 * 194.42244 * 9 8 7 23 23 H 1.38085 * 78.50240 * 351.63226 * 10 9 8 24 24 C 1.50703 * 109.47017 * 319.57562 * 18 16 15 25 25 C 1.33353 * 125.19047 * 108.62021 * 24 18 16 26 26 C 1.38471 * 114.92670 * 179.97438 * 25 24 18 27 27 C 1.33495 * 114.88948 * 0.02562 * 26 25 24 28 28 Cl 1.73593 * 125.21213 * 180.02562 * 27 26 25 29 29 S 1.75881 * 125.18699 * 288.31679 * 24 18 16 30 30 H 1.08998 * 109.47363 * 301.22734 * 1 2 3 31 31 H 1.09003 * 109.47087 * 61.22906 * 1 2 3 32 32 H 1.09006 * 109.47183 * 181.22579 * 1 2 3 33 33 H 1.09004 * 109.47345 * 178.76891 * 3 2 1 34 34 H 1.08995 * 109.47627 * 298.76931 * 3 2 1 35 35 H 1.09000 * 109.47021 * 58.77320 * 3 2 1 36 36 H 1.08993 * 110.43722 * 358.05816 * 4 2 1 37 37 H 1.09001 * 110.43571 * 120.44060 * 4 2 1 38 38 H 1.09001 * 109.47175 * 117.66646 * 8 7 6 39 39 H 1.03516 * 46.57513 * 54.94616 * 20 8 7 40 40 H 0.93053 * 51.31569 * 169.22857 * 23 10 9 41 41 H 1.07998 * 120.00414 * 179.71890 * 11 10 9 42 42 H 1.07997 * 120.00042 * 180.25635 * 12 11 10 43 43 H 1.08001 * 119.99812 * 179.78490 * 13 12 11 44 44 H 1.07996 * 120.00190 * 0.02562 * 14 9 8 45 45 H 1.07993 * 122.53583 * 0.02562 * 25 24 18 46 46 H 1.08002 * 122.55537 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0265 1.4472 0.0000 4 6 2.0280 -0.6946 -1.2718 5 16 3.0319 -2.0863 -0.6666 6 6 2.7903 -1.7626 1.0533 7 7 3.2924 -2.4634 2.0301 8 6 3.4672 -1.8571 3.3523 9 6 4.9160 -1.9445 3.7574 10 6 5.7799 -0.9064 3.4627 11 6 7.1101 -0.9888 3.8297 12 6 7.5742 -2.1049 4.5004 13 6 6.7101 -3.1429 4.7956 14 6 5.3810 -3.0625 4.4242 15 7 1.9997 -0.6579 1.1979 16 6 1.6685 -0.1956 2.4198 17 8 1.0335 0.8318 2.5278 18 6 2.0873 -0.9554 3.6520 19 8 1.2715 -0.5593 4.7562 20 14 3.8721 -0.5827 4.0337 21 1 3.9666 0.7258 4.7294 22 1 4.4247 -1.6489 4.9072 23 1 4.6478 -0.5278 2.7685 24 6 1.9226 -2.4338 3.4106 25 6 2.9218 -3.3023 3.2499 26 6 2.5277 -4.6131 3.0407 27 6 1.2071 -4.8081 3.0311 28 17 0.4229 -6.3384 2.7931 29 16 0.3834 -3.2783 3.3052 30 1 -0.3634 0.5328 0.8787 31 1 -0.3633 0.4946 -0.9008 32 1 -0.3634 -1.0275 0.0220 33 1 3.1163 1.4574 0.0221 34 1 1.6766 1.9514 -0.9007 35 1 1.6405 1.9637 0.8788 36 1 1.1863 -1.0565 -1.8623 37 1 2.6410 -0.0137 -1.8622 38 1 2.8537 -2.3887 4.0797 39 1 3.1625 -0.8112 3.3155 40 1 5.4166 -0.0329 2.9417 41 1 7.7861 -0.1798 3.5954 42 1 8.6125 -2.1675 4.7908 43 1 7.0735 -4.0164 5.3165 44 1 4.7061 -3.8736 4.6545 45 1 3.9597 -3.0058 3.2815 46 1 3.2348 -5.4165 2.8955 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000757799694.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 26 2020 14:59:32 Heat of formation + Delta-G solvation = 1209.433206 kcal Electronic energy + Delta-G solvation = -38277.802954 eV Core-core repulsion = 33850.702191 eV Total energy + Delta-G solvation = -4427.100763 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 423.052 amu Computer time = 8.51 seconds Orbital eigenvalues (eV) -50.57627 -40.76677 -39.73890 -36.97811 -36.60115 -35.30614 -34.03936 -33.05315 -31.79281 -30.83229 -29.27340 -27.83821 -27.44150 -27.22864 -25.35646 -24.27485 -23.09371 -22.56018 -21.50260 -20.37371 -19.05284 -18.64650 -18.10180 -17.42108 -16.94961 -16.29354 -16.00953 -15.81681 -15.25960 -14.83157 -14.58615 -14.24768 -14.13969 -13.86377 -13.71997 -13.69958 -13.54162 -13.04262 -12.86207 -12.80402 -12.57738 -12.38474 -12.35322 -12.11808 -11.80220 -11.58959 -11.56357 -11.44954 -11.14125 -10.98298 -10.64896 -10.55028 -10.39578 -10.21932 -10.16902 -10.03508 -9.40744 -9.21438 -8.75969 -8.56968 -8.32293 -8.04607 -7.83463 -7.56337 -6.77391 -6.32986 -5.97107 -5.88565 -5.66762 1.18452 1.40572 1.47987 1.68118 1.77733 1.97879 2.19622 2.24461 2.54190 2.65405 2.83845 3.14229 3.33036 3.41737 3.54644 3.82975 4.06236 4.20912 4.29096 4.37304 4.71151 4.86727 5.07139 5.26303 5.36070 5.40207 5.41680 5.46484 5.55643 5.69759 5.71670 5.77326 5.83502 5.86944 5.88867 5.98114 5.98641 6.00916 6.06075 6.25935 6.35953 6.43277 6.46053 6.55498 6.61424 6.67552 6.84303 6.86543 7.15753 7.26049 7.38207 7.65324 8.14420 8.65019 9.07234 Molecular weight = 423.05amu Principal moments of inertia in cm(-1) A = 0.006569 B = 0.005920 C = 0.004235 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4261.418347 B = 4728.277975 C = 6609.446810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C 0.152 3.848 3 C -0.165 4.165 4 C -0.105 4.105 5 S -0.079 6.079 6 C 0.257 3.743 7 N -0.390 5.390 8 C -0.745 4.745 9 C 0.017 3.983 10 C -0.438 4.438 11 C 0.000 4.000 12 C -0.261 4.261 13 C -0.059 4.059 14 C -0.235 4.235 15 N -0.540 5.540 16 C 0.449 3.551 17 O -0.504 6.504 18 C -0.081 4.081 19 O -0.750 6.750 20 Si 1.424 2.576 21 H -0.243 1.243 22 H -0.181 1.181 23 H -0.149 1.149 24 C -0.262 4.262 25 C 0.027 3.973 26 C -0.163 4.163 27 C -0.120 4.120 28 Cl -0.041 7.041 29 S 0.103 5.897 30 H 0.083 0.917 31 H 0.067 0.933 32 H 0.055 0.945 33 H 0.063 0.937 34 H 0.065 0.935 35 H 0.090 0.910 36 H 0.107 0.893 37 H 0.114 0.886 38 H 0.305 0.695 39 H 0.268 0.732 40 H 0.192 0.808 41 H 0.112 0.888 42 H 0.104 0.896 43 H 0.106 0.894 44 H 0.120 0.880 45 H 0.252 0.748 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.491 -0.304 -7.435 9.247 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C 0.065 3.935 3 C -0.223 4.223 4 C -0.254 4.254 5 S 0.154 5.846 6 C -0.106 4.106 7 N -0.106 5.106 8 C -0.855 4.855 9 C 0.011 3.989 10 C -0.455 4.455 11 C -0.018 4.018 12 C -0.279 4.279 13 C -0.077 4.077 14 C -0.253 4.253 15 N -0.273 5.273 16 C 0.239 3.761 17 O -0.376 6.376 18 C -0.145 4.145 19 O -0.694 6.694 20 Si 1.295 2.705 21 H -0.175 1.175 22 H -0.161 1.161 23 H -0.096 1.096 24 C -0.388 4.388 25 C -0.029 4.029 26 C -0.199 4.199 27 C -0.263 4.263 28 Cl -0.013 7.013 29 S 0.368 5.632 30 H 0.102 0.898 31 H 0.086 0.914 32 H 0.074 0.926 33 H 0.082 0.918 34 H 0.084 0.916 35 H 0.109 0.891 36 H 0.125 0.875 37 H 0.132 0.868 38 H 0.313 0.687 39 H 0.274 0.726 40 H 0.207 0.793 41 H 0.130 0.870 42 H 0.122 0.878 43 H 0.124 0.876 44 H 0.138 0.862 45 H 0.264 0.736 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 4.528 -0.434 -7.763 8.997 hybrid contribution -0.925 -2.021 -0.482 2.274 sum 3.603 -2.455 -8.245 9.326 Atomic orbital electron populations 1.22264 0.92955 1.02692 1.03794 1.20329 0.95880 0.94037 0.83258 1.22399 1.01731 0.93966 1.04197 1.24488 1.02776 0.98456 0.99696 1.85981 1.62456 1.39961 0.96216 1.23460 1.04068 0.87478 0.95609 1.68781 1.26957 1.18611 0.96223 1.35430 0.94461 1.46315 1.09298 1.16952 0.97924 0.95531 0.88484 1.21931 0.98880 1.04199 1.20443 1.20825 0.94156 0.95495 0.91327 1.20490 0.99117 0.96591 1.11752 1.20803 0.93007 0.97340 0.96559 1.20850 0.97282 1.02443 1.04716 1.46493 1.45747 1.27613 1.07440 1.25714 0.78663 0.87160 0.84523 1.90430 1.37081 1.24489 1.85576 1.25580 1.10794 0.84820 0.93262 1.95308 1.55764 1.83264 1.35099 0.66180 0.40125 0.72835 0.91391 1.17464 1.16129 1.09636 1.27997 0.90224 1.02317 1.18306 1.22441 1.05476 0.88171 0.86790 1.20819 0.93604 0.99620 1.05838 1.25847 0.97132 0.92179 1.11163 1.98315 1.80323 1.27319 1.95355 1.84638 1.11783 0.94536 1.72204 0.89795 0.91412 0.92560 0.91814 0.91628 0.89128 0.87507 0.86768 0.68698 0.72638 0.79259 0.86981 0.87814 0.87635 0.86177 0.73611 0.84276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 162. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.56 8.01 37.15 0.30 -2.26 16 2 C 0.15 2.44 1.02 -132.76 -0.14 2.31 16 3 C -0.16 -2.37 8.00 37.16 0.30 -2.07 16 4 C -0.10 -1.35 6.59 37.28 0.25 -1.11 16 5 S -0.08 -1.28 23.23 -107.50 -2.50 -3.78 16 6 C 0.26 5.07 7.15 -89.10 -0.64 4.43 16 7 N -0.39 -7.97 5.54 ******* -6.24 -14.21 16 8 C -0.74 -15.42 0.01 -179.57 0.00 -15.42 16 9 C 0.02 0.31 2.26 -104.63 -0.24 0.07 16 10 C -0.44 -7.52 6.07 -39.58 -0.24 -7.76 16 11 C 0.00 0.00 10.05 -39.58 -0.40 -0.40 16 12 C -0.26 -4.13 10.05 -39.58 -0.40 -4.53 16 13 C -0.06 -0.98 10.05 -39.58 -0.40 -1.37 16 14 C -0.23 -4.28 7.84 -39.58 -0.31 -4.60 16 15 N -0.54 -10.75 2.47 -103.49 -0.26 -11.01 16 16 C 0.45 10.66 5.17 -10.99 -0.06 10.61 16 17 O -0.50 -13.01 12.83 -13.54 -0.17 -13.19 16 18 C -0.08 -2.00 0.72 -83.81 -0.06 -2.06 16 19 O -0.75 -23.13 17.21 -54.34 -0.94 -24.07 16 20 Si 1.42 28.31 15.26 -169.99 -2.59 25.71 16 21 H -0.24 -4.50 7.11 56.52 0.40 -4.10 16 22 H -0.18 -3.53 3.22 -41.28 -0.13 -3.66 16 23 H -0.15 -2.62 2.86 -36.80 -0.11 -2.73 16 24 C -0.26 -6.08 2.74 -97.30 -0.27 -6.35 16 25 C 0.03 0.56 2.73 -141.85 -0.39 0.17 16 26 C -0.16 -3.17 9.99 -41.16 -0.41 -3.58 16 27 C -0.12 -2.35 7.10 29.07 0.21 -2.15 16 28 Cl -0.04 -0.69 29.29 -51.86 -1.52 -2.21 16 29 S 0.10 2.34 23.27 -107.50 -2.50 -0.16 16 30 H 0.08 1.63 6.27 -51.93 -0.33 1.30 16 31 H 0.07 0.84 8.14 -51.93 -0.42 0.41 16 32 H 0.06 0.95 8.14 -51.93 -0.42 0.53 16 33 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 34 H 0.06 0.73 8.14 -51.93 -0.42 0.30 16 35 H 0.09 1.56 5.98 -51.93 -0.31 1.25 16 36 H 0.11 1.18 7.63 -51.93 -0.40 0.79 16 37 H 0.11 1.16 7.63 -51.93 -0.40 0.77 16 38 H 0.30 6.86 1.78 -283.03 -0.50 6.36 16 39 H 0.27 5.70 0.00 0.00 0.00 5.70 16 40 H 0.19 2.92 4.75 -52.49 -0.25 2.67 16 41 H 0.11 1.39 8.06 -52.49 -0.42 0.97 16 42 H 0.10 1.41 8.06 -52.49 -0.42 0.98 16 43 H 0.11 1.49 8.06 -52.49 -0.42 1.07 16 44 H 0.12 2.14 6.68 -52.49 -0.35 1.79 16 45 H 0.25 4.96 0.85 -272.68 -0.23 4.73 16 46 H 0.14 2.41 8.06 -52.49 -0.42 1.98 16 LS Contribution 354.23 15.07 5.34 5.34 Total: -1.00 -31.82 354.23 -20.26 -52.08 By element: Atomic # 1 Polarization: 27.54 SS G_CDS: -5.99 Total: 21.55 kcal Atomic # 6 Polarization: -33.17 SS G_CDS: -2.89 Total: -36.07 kcal Atomic # 7 Polarization: -18.72 SS G_CDS: -6.50 Total: -25.22 kcal Atomic # 8 Polarization: -36.14 SS G_CDS: -1.11 Total: -37.25 kcal Atomic # 14 Polarization: 28.31 SS G_CDS: -2.59 Total: 25.71 kcal Atomic # 16 Polarization: 1.06 SS G_CDS: -5.00 Total: -3.93 kcal Atomic # 17 Polarization: -0.69 SS G_CDS: -1.52 Total: -2.21 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -31.82 -20.26 -52.08 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000757799694.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1261.509 kcal (2) G-P(sol) polarization free energy of solvation -31.820 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1229.689 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -20.256 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -52.076 kcal (6) G-S(sol) free energy of system = (1) + (5) 1209.433 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 8.51 seconds