Wall clock time and date at job start Sun Mar 29 2020 21:42:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 N 1.28704 * 126.04129 * 2 1 4 4 N 1.28516 * 110.66514 * 179.72963 * 3 2 1 5 5 C 1.33302 * 109.45508 * 0.41824 * 4 3 2 6 6 C 1.37079 * 126.03590 * 179.97438 * 2 1 3 7 7 C 1.47099 * 127.20099 * 0.03004 * 6 2 1 8 8 O 1.21667 * 119.99810 * 354.43825 * 7 6 2 9 9 N 1.34771 * 120.00006 * 174.43284 * 7 6 2 10 10 C 1.36845 * 120.00354 * 185.18730 * 9 7 6 11 11 H 1.08005 * 119.99576 * 359.97438 * 10 9 7 12 12 C 1.39049 * 120.00553 * 180.02562 * 10 9 7 13 13 N 1.31368 * 119.99851 * 0.02562 * 12 10 9 14 14 Si 1.86796 * 120.00187 * 179.97438 * 12 10 9 15 15 H 1.48499 * 109.47302 * 60.00159 * 14 12 10 16 16 H 1.48502 * 109.47192 * 180.02562 * 14 12 10 17 17 H 1.48493 * 109.47582 * 299.99889 * 14 12 10 18 18 H 1.09002 * 109.47126 * 274.18354 * 1 2 3 19 19 H 1.08998 * 109.47328 * 34.18084 * 1 2 3 20 20 H 1.08994 * 109.47518 * 154.18760 * 1 2 3 21 21 H 1.08002 * 126.82146 * 179.86629 * 5 4 3 22 22 H 0.97004 * 119.99843 * 5.19074 * 9 7 6 23 23 H 0.96997 * 120.00161 * 180.02562 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2222 1.0407 0.0000 4 7 3.4614 0.6999 0.0057 5 6 3.5562 -0.6297 0.0006 6 6 2.2714 -1.1085 0.0005 7 6 1.8472 -2.5170 0.0005 8 8 0.6675 -2.7969 0.1022 9 7 2.7651 -3.4972 -0.1122 10 6 2.3641 -4.8013 -0.2191 11 1 1.3119 -5.0449 -0.2127 12 6 3.3112 -5.8127 -0.3348 13 7 4.5911 -5.5165 -0.3411 14 14 2.7638 -7.5928 -0.4800 15 1 1.9178 -7.7534 -1.6898 16 1 3.9568 -8.4702 -0.5896 17 1 1.9816 -7.9700 0.7246 18 1 -0.3633 0.0750 1.0249 19 1 -0.3634 0.8501 -0.5773 20 1 -0.3634 -0.9250 -0.4474 21 1 4.4647 -1.2138 0.0013 22 1 3.7102 -3.2785 -0.1175 23 1 5.2518 -6.2221 -0.4222 RHF calculation, no. of doubly occupied orbitals= 35 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000307518170.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:42:17 Heat of formation + Delta-G solvation = 57.150473 kcal Electronic energy + Delta-G solvation = -11953.502188 eV Core-core repulsion = 9611.143152 eV Total energy + Delta-G solvation = -2342.359036 eV No. of doubly occupied orbitals = 35 Molecular weight (most abundant/longest-lived isotopes) = 196.070 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -42.67213 -38.14946 -34.61650 -33.81024 -31.75985 -30.50182 -27.62615 -25.48620 -22.94471 -21.68018 -19.65239 -18.30900 -16.92753 -16.23363 -15.97927 -14.83869 -14.30064 -13.77758 -13.51908 -13.09590 -12.92963 -12.55709 -11.83170 -11.49379 -11.25118 -10.63687 -10.61800 -10.45527 -9.81435 -9.71989 -8.87154 -8.82194 -8.28159 -6.72062 -4.07091 1.58750 2.68802 2.82460 3.10582 3.13343 3.16881 3.94692 4.01430 4.55619 4.91694 5.08208 5.17180 5.36366 5.49571 5.71994 5.86092 6.20017 6.50845 6.93049 7.27320 7.73157 8.27026 8.82685 8.87602 9.18747 9.69779 10.43758 Molecular weight = 196.07amu Principal moments of inertia in cm(-1) A = 0.066614 B = 0.009563 C = 0.008411 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 420.230976 B = 2927.332852 C = 3328.344307 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.271 5.271 3 N -0.094 5.094 4 N -0.278 5.278 5 C -0.035 4.035 6 C -0.020 4.020 7 C 0.489 3.511 8 O -0.599 6.599 9 N -0.520 5.520 10 C -0.299 4.299 11 H 0.111 0.889 12 C 0.029 3.971 13 N -0.880 5.880 14 Si 0.939 3.061 15 H -0.270 1.270 16 H -0.281 1.281 17 H -0.270 1.270 18 H 0.087 0.913 19 H 0.090 0.910 20 H 0.118 0.882 21 H 0.193 0.807 22 H 0.398 0.602 23 H 0.280 0.720 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.056 3.936 -0.073 4.984 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.067 5.067 3 N -0.074 5.074 4 N -0.143 5.143 5 C -0.195 4.195 6 C -0.155 4.155 7 C 0.274 3.726 8 O -0.487 6.487 9 N -0.154 5.154 10 C -0.429 4.429 11 H 0.129 0.871 12 C -0.176 4.176 13 N -0.519 5.519 14 Si 0.765 3.235 15 H -0.195 1.195 16 H -0.206 1.206 17 H -0.195 1.195 18 H 0.105 0.895 19 H 0.109 0.891 20 H 0.137 0.863 21 H 0.210 0.790 22 H 0.232 0.768 23 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -3.645 5.176 -0.035 6.331 hybrid contribution 0.287 -1.866 -0.042 1.888 sum -3.358 3.310 -0.077 4.716 Atomic orbital electron populations 1.22390 0.72228 1.06334 1.04762 1.47400 1.09419 1.03688 1.46185 1.78079 0.96741 1.12055 1.20521 1.74703 1.09370 1.13037 1.17141 1.23804 0.97134 0.91622 1.06962 1.22504 0.90795 0.91878 1.10319 1.16229 0.86556 0.81751 0.88043 1.90603 1.16751 1.82794 1.58508 1.41606 1.08426 1.05779 1.59558 1.19793 0.95331 0.80695 1.47092 0.87141 1.25450 0.94735 1.01257 0.96207 1.69580 1.00339 1.35364 1.46586 0.85775 0.78108 0.80207 0.79411 1.19499 1.20607 1.19489 0.89498 0.89090 0.86348 0.78965 0.76760 0.90999 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.20 10.98 59.85 0.66 1.86 14 2 N -0.27 -5.05 3.79 -64.13 -0.24 -5.29 14 3 N -0.09 -1.81 13.14 60.35 0.79 -1.02 14 4 N -0.28 -5.50 12.35 30.49 0.38 -5.12 14 5 C -0.04 -0.67 11.55 -17.32 -0.20 -0.87 14 6 C -0.02 -0.41 6.98 -82.33 -0.57 -0.99 14 7 C 0.49 11.42 7.74 -12.67 -0.10 11.32 14 8 O -0.60 -15.17 14.42 5.22 0.08 -15.10 14 9 N -0.52 -12.59 5.27 -12.05 -0.06 -12.65 14 10 C -0.30 -7.74 9.67 -15.01 -0.15 -7.89 14 11 H 0.11 2.95 7.16 -52.48 -0.38 2.57 14 12 C 0.03 0.71 5.50 -17.45 -0.10 0.62 14 13 N -0.88 -22.16 13.05 55.50 0.72 -21.43 14 14 Si 0.94 19.39 29.55 -169.99 -5.02 14.36 14 15 H -0.27 -5.53 7.11 56.52 0.40 -5.13 14 16 H -0.28 -5.67 7.11 56.52 0.40 -5.27 14 17 H -0.27 -5.55 7.11 56.52 0.40 -5.15 14 18 H 0.09 1.10 8.14 -51.93 -0.42 0.68 14 19 H 0.09 1.01 8.14 -51.93 -0.42 0.59 14 20 H 0.12 1.86 6.35 -51.93 -0.33 1.53 14 21 H 0.19 3.15 7.56 -52.49 -0.40 2.76 14 22 H 0.40 9.13 6.93 -40.82 -0.28 8.85 14 23 H 0.28 6.63 8.31 -40.82 -0.34 6.29 14 LS Contribution 217.91 15.07 3.28 3.28 Total: -1.00 -29.29 217.91 -1.90 -31.19 By element: Atomic # 1 Polarization: 9.09 SS G_CDS: -1.37 Total: 7.73 kcal Atomic # 6 Polarization: 4.51 SS G_CDS: -0.46 Total: 4.05 kcal Atomic # 7 Polarization: -47.11 SS G_CDS: 1.59 Total: -45.52 kcal Atomic # 8 Polarization: -15.17 SS G_CDS: 0.08 Total: -15.10 kcal Atomic # 14 Polarization: 19.39 SS G_CDS: -5.02 Total: 14.36 kcal Total LS contribution 3.28 Total: 3.28 kcal Total: -29.29 -1.90 -31.19 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000307518170.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.340 kcal (2) G-P(sol) polarization free energy of solvation -29.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.900 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.190 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.150 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds