Wall clock time and date at job start Sun Mar 29 2020 22:31:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38386 * 120.00028 * 2 1 4 4 N 1.32124 * 119.99728 * 179.97438 * 3 2 1 5 5 C 1.32149 * 120.00306 * 0.02562 * 4 3 2 6 6 C 1.50706 * 120.00392 * 179.97438 * 5 4 3 7 7 N 1.46901 * 109.46940 * 275.00321 * 6 5 4 8 8 C 1.46903 * 110.99799 * 179.97438 * 7 6 5 9 9 H 1.08994 * 109.46835 * 34.99594 * 8 7 6 10 10 C 1.53004 * 109.46805 * 274.99566 * 8 7 6 11 11 C 1.50705 * 109.46803 * 154.99862 * 8 7 6 12 12 H 1.07994 * 119.99985 * 359.97438 * 11 8 7 13 13 C 1.37883 * 119.99705 * 179.97438 * 11 8 7 14 14 N 1.31510 * 119.99684 * 0.02562 * 13 11 8 15 15 Si 1.86798 * 119.99956 * 179.97438 * 13 11 8 16 16 H 1.48498 * 109.46906 * 90.00155 * 15 13 11 17 17 H 1.48500 * 109.47265 * 210.00322 * 15 13 11 18 18 H 1.48503 * 109.46952 * 330.00479 * 15 13 11 19 19 C 1.38341 * 119.99880 * 0.02562 * 5 4 3 20 20 N 1.32127 * 120.00078 * 179.97438 * 2 1 3 21 21 H 1.09001 * 109.47037 * 90.00035 * 1 2 3 22 22 H 1.09006 * 109.46818 * 209.99333 * 1 2 3 23 23 H 1.09000 * 109.47469 * 329.99759 * 1 2 3 24 24 H 1.08005 * 120.00221 * 0.02562 * 3 2 1 25 25 H 1.09005 * 109.46577 * 34.99680 * 6 5 4 26 26 H 1.08993 * 109.47521 * 154.99893 * 6 5 4 27 27 H 1.00907 * 111.00133 * 303.94720 * 7 6 5 28 28 H 1.08997 * 109.47201 * 300.00103 * 10 8 7 29 29 H 1.08994 * 109.47184 * 60.00171 * 10 8 7 30 30 H 1.08999 * 109.46881 * 180.02562 * 10 8 7 31 31 H 0.97000 * 119.99554 * 179.97438 * 14 13 11 32 32 H 1.08010 * 119.99675 * 179.97438 * 19 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1989 1.1985 0.0000 4 7 3.5201 1.1984 0.0005 5 6 4.1809 0.0539 0.0005 6 6 5.6879 0.0538 0.0005 7 7 6.1776 0.1746 -1.3792 8 6 7.6461 0.1785 -1.4182 9 1 8.0319 -0.4809 -0.6408 10 6 8.1587 1.6006 -1.1815 11 6 8.1140 -0.3063 -2.7662 12 1 7.3928 -0.5894 -3.5185 13 6 9.4631 -0.3884 -3.0391 14 7 10.3414 -0.0441 -2.1227 15 14 10.0432 -0.9900 -4.7096 16 1 10.1800 0.1659 -5.6318 17 1 11.3578 -1.6650 -4.5636 18 1 9.0529 -1.9491 -5.2616 19 6 3.4892 -1.1441 -0.0006 20 7 2.1676 -1.1442 0.0005 21 1 -0.3633 0.0000 -1.0277 22 1 -0.3633 -0.8901 0.5138 23 1 -0.3634 0.8899 0.5139 24 1 1.6589 2.1338 0.0004 25 1 6.0512 0.8957 0.5900 26 1 6.0513 -0.8775 0.4348 27 1 5.8021 -0.5588 -1.9617 28 1 7.7728 2.2600 -1.9589 29 1 7.8202 1.9513 -0.2066 30 1 9.2483 1.6036 -1.2109 31 1 11.2904 -0.1022 -2.3146 32 1 4.0292 -2.0795 -0.0010 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000061321185.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:31:34 Heat of formation + Delta-G solvation = 39.735364 kcal Electronic energy + Delta-G solvation = -14369.188281 eV Core-core repulsion = 11943.569316 eV Total energy + Delta-G solvation = -2425.618965 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.122 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -40.98958 -36.23501 -34.39243 -33.17086 -32.14601 -29.60952 -27.34629 -25.31959 -24.53970 -24.12657 -21.62660 -19.81932 -17.65158 -16.81854 -15.94628 -15.50084 -15.13909 -14.78367 -14.07875 -13.67725 -13.36144 -12.77673 -12.68894 -12.62256 -12.13772 -11.88915 -11.39104 -11.21509 -10.95371 -10.90981 -10.74767 -10.32662 -10.14996 -10.06918 -8.98695 -8.87793 -8.80764 -8.49338 -7.35087 -6.04720 -4.11425 0.87192 1.28230 3.29340 3.35703 3.38617 3.76651 4.08652 4.32334 4.39699 4.56558 4.79727 5.12895 5.25144 5.27115 5.38713 5.45256 5.55813 5.60415 5.82390 5.99726 6.19531 6.50313 6.86799 7.14084 7.20506 7.42062 7.47378 7.75318 7.85598 7.96110 8.24294 8.31790 8.59633 8.97636 9.54552 11.01568 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.051655 B = 0.005481 C = 0.005228 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 541.924203 B = 5107.109111 C = 5354.265936 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.059 3.941 3 C 0.051 3.949 4 N -0.418 5.418 5 C 0.095 3.905 6 C 0.109 3.891 7 N -0.678 5.678 8 C 0.213 3.787 9 H 0.004 0.996 10 C -0.125 4.125 11 C -0.519 4.519 12 H 0.060 0.940 13 C 0.063 3.937 14 N -0.889 5.889 15 Si 0.898 3.102 16 H -0.280 1.280 17 H -0.287 1.287 18 H -0.274 1.274 19 C 0.055 3.945 20 N -0.441 5.441 21 H 0.079 0.921 22 H 0.076 0.924 23 H 0.076 0.924 24 H 0.165 0.835 25 H 0.086 0.914 26 H 0.042 0.958 27 H 0.330 0.670 28 H 0.032 0.968 29 H 0.006 0.994 30 H 0.081 0.919 31 H 0.261 0.739 32 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.765 -0.241 5.093 15.621 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.081 4.081 3 C -0.109 4.109 4 N -0.132 5.132 5 C -0.046 4.046 6 C -0.021 4.021 7 N -0.310 5.310 8 C 0.106 3.894 9 H 0.022 0.978 10 C -0.183 4.183 11 C -0.558 4.558 12 H 0.078 0.922 13 C -0.139 4.139 14 N -0.528 5.528 15 Si 0.726 3.274 16 H -0.206 1.206 17 H -0.212 1.212 18 H -0.199 1.199 19 C -0.105 4.105 20 N -0.157 5.157 21 H 0.097 0.903 22 H 0.095 0.905 23 H 0.095 0.905 24 H 0.182 0.818 25 H 0.104 0.896 26 H 0.060 0.940 27 H 0.147 0.853 28 H 0.051 0.949 29 H 0.025 0.975 30 H 0.100 0.900 31 H 0.071 0.929 32 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -14.578 0.461 5.122 15.459 hybrid contribution 0.605 -1.189 -0.755 1.533 sum -13.974 -0.728 4.367 14.658 Atomic orbital electron populations 1.20624 0.88096 1.03509 1.03219 1.22259 0.98254 0.89997 0.97618 1.23631 0.90975 0.98912 0.97411 1.68345 1.08005 1.29682 1.07179 1.22483 0.98648 0.89093 0.94349 1.20802 0.85715 1.01185 0.94447 1.60752 1.12521 1.52193 1.05555 1.19154 0.80034 0.93823 0.96425 0.97849 1.21714 1.03040 0.97261 0.96277 1.21234 0.91858 1.43809 0.98903 0.92224 1.24908 0.96675 0.95231 0.97096 1.69896 1.01535 1.47942 1.33398 0.86506 0.77994 0.78899 0.84043 1.20595 1.21236 1.19943 1.23631 0.90385 0.99565 0.96937 1.68254 1.08820 1.29352 1.09256 0.90266 0.90496 0.90480 0.81830 0.89620 0.93987 0.85276 0.94897 0.97533 0.90034 0.92870 0.81546 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.80 10.19 36.00 0.37 -0.44 16 2 C 0.06 0.75 6.79 -82.41 -0.56 0.19 16 3 C 0.05 0.68 10.88 -17.37 -0.19 0.49 16 4 N -0.42 -6.98 10.42 -9.29 -0.10 -7.08 16 5 C 0.09 1.57 6.30 -82.41 -0.52 1.05 16 6 C 0.11 1.99 5.81 -4.97 -0.03 1.96 16 7 N -0.68 -14.68 6.29 -109.21 -0.69 -15.37 16 8 C 0.21 5.37 2.60 -68.86 -0.18 5.19 16 9 H 0.00 0.10 7.80 -51.93 -0.40 -0.30 16 10 C -0.12 -3.14 9.19 37.16 0.34 -2.80 16 11 C -0.52 -14.21 8.59 -34.44 -0.30 -14.51 16 12 H 0.06 1.62 7.62 -52.49 -0.40 1.22 16 13 C 0.06 1.73 5.30 -17.82 -0.09 1.64 16 14 N -0.89 -25.25 11.32 55.43 0.63 -24.63 16 15 Si 0.90 21.21 29.54 -169.99 -5.02 16.19 16 16 H -0.28 -6.61 7.11 56.52 0.40 -6.20 16 17 H -0.29 -6.71 7.11 56.52 0.40 -6.30 16 18 H -0.27 -6.39 7.11 56.52 0.40 -5.99 16 19 C 0.06 0.82 10.86 -17.37 -0.19 0.63 16 20 N -0.44 -6.43 10.42 -9.29 -0.10 -6.53 16 21 H 0.08 0.59 8.14 -51.93 -0.42 0.17 16 22 H 0.08 0.63 8.14 -51.93 -0.42 0.21 16 23 H 0.08 0.46 8.09 -51.93 -0.42 0.04 16 24 H 0.16 1.59 8.06 -52.48 -0.42 1.16 16 25 H 0.09 1.63 7.44 -51.93 -0.39 1.24 16 26 H 0.04 0.71 7.97 -51.93 -0.41 0.30 16 27 H 0.33 6.97 8.22 -39.29 -0.32 6.64 16 28 H 0.03 0.83 8.14 -51.93 -0.42 0.40 16 29 H 0.01 0.13 7.45 -51.93 -0.39 -0.26 16 30 H 0.08 2.21 6.07 -51.93 -0.32 1.90 16 31 H 0.26 7.07 8.31 -40.82 -0.34 6.73 16 32 H 0.17 2.11 8.06 -52.48 -0.42 1.68 16 LS Contribution 275.33 15.07 4.15 4.15 Total: -1.00 -30.44 275.33 -6.77 -37.21 By element: Atomic # 1 Polarization: 6.94 SS G_CDS: -4.30 Total: 2.64 kcal Atomic # 6 Polarization: -5.24 SS G_CDS: -1.35 Total: -6.59 kcal Atomic # 7 Polarization: -53.35 SS G_CDS: -0.25 Total: -53.60 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -5.02 Total: 16.19 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -30.44 -6.77 -37.21 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000061321185.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.945 kcal (2) G-P(sol) polarization free energy of solvation -30.440 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.504 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.209 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.735 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds