Wall clock time and date at job start Sun Mar 29 2020 22:02:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17394 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 N 1.46505 * 109.46764 * 174.79408 * 3 2 1 5 5 C 1.37098 * 119.99674 * 83.26609 * 4 3 2 6 6 H 1.08001 * 119.99824 * 166.31404 * 5 4 3 7 7 C 1.38944 * 120.00255 * 346.31480 * 5 4 3 8 8 N 1.31414 * 120.00246 * 359.66160 * 7 5 4 9 9 Si 1.86811 * 120.00096 * 179.65676 * 7 5 4 10 10 H 1.48503 * 109.46963 * 90.00091 * 9 7 5 11 11 H 1.48491 * 109.47271 * 210.00152 * 9 7 5 12 12 H 1.48496 * 109.46887 * 330.00445 * 9 7 5 13 13 C 1.34768 * 119.99795 * 263.26613 * 4 3 2 14 14 O 1.21299 * 119.99750 * 184.54841 * 13 4 3 15 15 C 1.50694 * 120.00378 * 4.55220 * 13 4 3 16 16 H 1.08995 * 109.47248 * 31.31683 * 15 13 4 17 17 C 1.53006 * 109.47004 * 271.31532 * 15 13 4 18 18 C 1.53004 * 109.47340 * 151.31766 * 15 13 4 19 19 C 1.53000 * 117.49903 * 180.02562 * 18 15 13 20 20 C 1.52998 * 60.03164 * 107.47268 * 19 18 15 21 21 H 4.40645 * 5.51407 * 179.97438 * 4 1 2 22 22 H 1.09000 * 109.47295 * 54.79454 * 3 2 1 23 23 H 1.09003 * 109.47032 * 294.78859 * 3 2 1 24 24 H 0.97001 * 120.00176 * 180.02562 * 8 7 5 25 25 H 1.09005 * 109.47140 * 294.61305 * 17 15 13 26 26 H 1.09000 * 109.46754 * 54.60977 * 17 15 13 27 27 H 1.08999 * 109.47084 * 174.60871 * 17 15 13 28 28 H 1.08994 * 115.56253 * 34.30894 * 18 15 13 29 29 H 1.09000 * 117.49804 * 214.97843 * 19 18 15 30 30 H 1.09003 * 117.49640 * 359.96953 * 19 18 15 31 31 H 1.09006 * 117.49491 * 107.49879 * 20 19 18 32 32 H 1.08993 * 117.49985 * 252.51952 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1336 1.3765 -0.1253 5 6 3.2305 2.1733 0.9861 6 1 3.7881 3.0971 0.9413 7 6 2.6113 1.7923 2.1702 8 7 1.9272 0.6715 2.2229 9 14 2.7512 2.8734 3.6873 10 1 1.6310 3.8481 3.7055 11 1 2.6906 2.0267 4.9057 12 1 4.0432 3.6047 3.6564 13 6 3.4870 1.8587 -1.3332 14 8 3.9680 2.9684 -1.4261 15 6 3.2846 1.0194 -2.5683 16 1 2.4131 0.3789 -2.4334 17 6 4.5231 0.1526 -2.8045 18 6 3.0639 1.9333 -3.7754 19 6 2.8372 1.2670 -5.1339 20 6 1.6708 1.9421 -4.4097 21 1 -1.0503 -0.0005 -0.0001 22 1 3.0096 -0.5916 -0.8397 23 1 3.0095 -0.4301 0.9330 24 1 1.4946 0.4057 3.0495 25 1 5.3756 0.7920 -3.0341 26 1 4.7361 -0.4288 -1.9075 27 1 4.3399 -0.5227 -3.6402 28 1 3.6164 2.8727 -3.7613 29 1 3.2410 1.7678 -6.0138 30 1 2.8458 0.1775 -5.1677 31 1 1.3072 2.8872 -4.8132 32 1 0.9122 1.2969 -3.9668 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000300785376.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:02:28 Heat of formation + Delta-G solvation = 56.146215 kcal Electronic energy + Delta-G solvation = -15261.073514 eV Core-core repulsion = 12803.873425 eV Total energy + Delta-G solvation = -2457.200089 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.116 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.12568 -36.84559 -35.09001 -32.20312 -31.36299 -30.91404 -26.41988 -25.14768 -23.83249 -21.97246 -20.64957 -18.41425 -17.85275 -16.68207 -16.28118 -15.22396 -14.45178 -14.12650 -13.94389 -13.66114 -13.03999 -12.74713 -12.38075 -12.02852 -11.54496 -11.44088 -11.25909 -11.09702 -11.03389 -10.48012 -10.44288 -10.25538 -9.96158 -9.58839 -9.47419 -9.16298 -8.66201 -8.29920 -7.87481 -6.21166 -3.84575 3.17175 3.25817 3.30673 3.74143 3.95939 4.13374 4.22063 4.28060 4.81964 5.11203 5.13438 5.30371 5.40204 5.58109 5.67116 5.74827 5.86330 5.91867 6.02331 6.16720 6.23060 6.29948 6.38955 6.45187 6.59519 6.80773 7.02277 7.19505 7.57138 8.06499 8.47569 8.97049 9.17052 9.40377 9.93934 10.71454 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.034163 B = 0.009391 C = 0.008464 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 819.403874 B = 2981.009758 C = 3307.172929 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.288 4.288 2 C -0.087 4.087 3 C 0.231 3.769 4 N -0.447 5.447 5 C -0.302 4.302 6 H 0.104 0.896 7 C 0.026 3.974 8 N -0.880 5.880 9 Si 0.931 3.069 10 H -0.279 1.279 11 H -0.284 1.284 12 H -0.270 1.270 13 C 0.461 3.539 14 O -0.585 6.585 15 C -0.077 4.077 16 H 0.081 0.919 17 C -0.135 4.135 18 C -0.124 4.124 19 C -0.183 4.183 20 C -0.183 4.183 21 H 0.195 0.805 22 H 0.056 0.944 23 H 0.123 0.877 24 H 0.267 0.733 25 H 0.060 0.940 26 H 0.058 0.942 27 H 0.056 0.944 28 H 0.115 0.885 29 H 0.089 0.911 30 H 0.091 0.909 31 H 0.089 0.911 32 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.071 -4.123 -7.479 8.541 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.307 4.307 2 C -0.090 4.090 3 C 0.108 3.892 4 N -0.165 5.165 5 C -0.429 4.429 6 H 0.122 0.878 7 C -0.176 4.176 8 N -0.520 5.520 9 Si 0.758 3.242 10 H -0.205 1.205 11 H -0.209 1.209 12 H -0.195 1.195 13 C 0.249 3.751 14 O -0.469 6.469 15 C -0.098 4.098 16 H 0.099 0.901 17 C -0.193 4.193 18 C -0.143 4.143 19 C -0.220 4.220 20 C -0.220 4.220 21 H 0.212 0.788 22 H 0.074 0.926 23 H 0.140 0.860 24 H 0.079 0.921 25 H 0.079 0.921 26 H 0.077 0.923 27 H 0.075 0.925 28 H 0.133 0.867 29 H 0.108 0.892 30 H 0.109 0.891 31 H 0.108 0.892 32 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 0.251 -3.664 -7.315 8.185 hybrid contribution -0.544 0.407 0.956 1.173 sum -0.293 -3.257 -6.359 7.151 Atomic orbital electron populations 1.24161 0.95308 1.02705 1.08556 1.23083 0.94234 0.97794 0.93844 1.18607 0.84406 0.84300 1.01893 1.43729 1.55813 1.10864 1.06071 1.19764 1.30991 1.04789 0.87402 0.87824 1.25303 0.95661 0.97064 0.99543 1.69901 1.33129 1.21687 1.27287 0.85842 0.78816 0.79365 0.80168 1.20512 1.20921 1.19515 1.19902 0.83969 0.87423 0.83783 1.90489 1.48983 1.21614 1.85856 1.20748 0.99484 0.96404 0.93200 0.90125 1.21691 0.97255 0.98955 1.01362 1.22120 0.99350 1.01077 0.91715 1.22916 1.03592 0.99724 0.95786 1.22991 0.92023 1.02306 1.04643 0.78783 0.92574 0.85995 0.92134 0.92132 0.92288 0.92504 0.86711 0.89237 0.89094 0.89220 0.88989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.29 -6.25 19.24 29.55 0.57 -5.68 16 2 C -0.09 -2.03 10.71 -37.12 -0.40 -2.42 16 3 C 0.23 5.23 4.86 -6.82 -0.03 5.20 16 4 N -0.45 -11.42 2.60 -117.93 -0.31 -11.73 16 5 C -0.30 -8.40 9.47 -14.94 -0.14 -8.54 16 6 H 0.10 3.03 7.23 -52.49 -0.38 2.65 16 7 C 0.03 0.67 5.36 -17.47 -0.09 0.58 16 8 N -0.88 -22.94 7.99 55.50 0.44 -22.50 16 9 Si 0.93 21.04 29.55 -169.99 -5.02 16.02 16 10 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 11 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 12 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 13 C 0.46 11.26 6.69 -10.99 -0.07 11.19 16 14 O -0.59 -16.23 15.49 5.54 0.09 -16.14 16 15 C -0.08 -1.45 2.02 -91.77 -0.19 -1.63 16 16 H 0.08 1.50 6.31 -51.93 -0.33 1.17 16 17 C -0.13 -2.14 8.66 37.16 0.32 -1.81 16 18 C -0.12 -2.16 4.99 -90.58 -0.45 -2.61 16 19 C -0.18 -2.48 9.79 -26.73 -0.26 -2.74 16 20 C -0.18 -2.78 10.18 -26.70 -0.27 -3.06 16 21 H 0.20 3.49 7.80 -54.08 -0.42 3.07 16 22 H 0.06 1.08 5.18 -51.93 -0.27 0.81 16 23 H 0.12 2.93 6.35 -51.93 -0.33 2.60 16 24 H 0.27 6.74 8.31 -40.82 -0.34 6.41 16 25 H 0.06 0.97 8.14 -51.93 -0.42 0.55 16 26 H 0.06 0.92 7.14 -51.93 -0.37 0.55 16 27 H 0.06 0.74 7.49 -51.93 -0.39 0.35 16 28 H 0.11 2.21 7.35 -51.93 -0.38 1.83 16 29 H 0.09 1.07 8.14 -51.93 -0.42 0.65 16 30 H 0.09 1.12 7.67 -51.93 -0.40 0.72 16 31 H 0.09 1.27 8.14 -51.93 -0.42 0.85 16 32 H 0.09 1.41 8.05 -51.93 -0.42 0.99 16 LS Contribution 272.23 15.07 4.10 4.10 Total: -1.00 -30.30 272.23 -5.81 -36.11 By element: Atomic # 1 Polarization: 9.76 SS G_CDS: -4.09 Total: 5.67 kcal Atomic # 6 Polarization: -10.51 SS G_CDS: -1.02 Total: -11.53 kcal Atomic # 7 Polarization: -34.36 SS G_CDS: 0.14 Total: -34.23 kcal Atomic # 8 Polarization: -16.23 SS G_CDS: 0.09 Total: -16.14 kcal Atomic # 14 Polarization: 21.04 SS G_CDS: -5.02 Total: 16.02 kcal Total LS contribution 4.10 Total: 4.10 kcal Total: -30.30 -5.81 -36.11 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000300785376.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.251 kcal (2) G-P(sol) polarization free energy of solvation -30.299 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.953 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.807 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.105 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.146 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds