Wall clock time and date at job start Sun Mar 29 2020 22:02:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17394 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 N 1.46497 * 109.47371 * 353.49943 * 3 2 1 5 5 C 1.37105 * 119.99933 * 87.78025 * 4 3 2 6 6 H 1.07996 * 119.99870 * 310.92992 * 5 4 3 7 7 C 1.38953 * 120.00215 * 130.93231 * 5 4 3 8 8 N 1.31401 * 120.00238 * 161.30085 * 7 5 4 9 9 Si 1.86800 * 119.99762 * 341.30531 * 7 5 4 10 10 H 1.48496 * 109.47269 * 94.45909 * 9 7 5 11 11 H 1.48505 * 109.47275 * 214.46154 * 9 7 5 12 12 H 1.48502 * 109.47073 * 334.45915 * 9 7 5 13 13 C 1.34768 * 120.00229 * 267.78088 * 4 3 2 14 14 O 1.21302 * 120.00228 * 183.34652 * 13 4 3 15 15 C 1.50702 * 120.00268 * 3.33950 * 13 4 3 16 16 H 1.09000 * 109.47039 * 324.96064 * 15 13 4 17 17 C 1.53001 * 109.46628 * 84.95532 * 15 13 4 18 18 C 1.52992 * 109.47746 * 204.95455 * 15 13 4 19 19 C 1.52999 * 117.49906 * 180.02562 * 18 15 13 20 20 C 1.53002 * 60.00243 * 252.51332 * 19 18 15 21 21 H 4.40638 * 5.51447 * 179.97438 * 4 1 2 22 22 H 1.09002 * 109.47333 * 233.49745 * 3 2 1 23 23 H 1.09002 * 109.46961 * 113.50071 * 3 2 1 24 24 H 0.96998 * 120.00192 * 179.97438 * 8 7 5 25 25 H 1.09002 * 109.47012 * 182.81211 * 17 15 13 26 26 H 1.09008 * 109.47234 * 302.80944 * 17 15 13 27 27 H 1.08999 * 109.47349 * 62.80958 * 17 15 13 28 28 H 1.09003 * 115.56259 * 325.69645 * 18 15 13 29 29 H 1.09003 * 117.49822 * 145.02834 * 19 18 15 30 30 H 1.08993 * 117.50101 * 359.97438 * 19 18 15 31 31 H 1.08995 * 117.50189 * 107.48898 * 20 19 18 32 32 H 1.09003 * 117.49810 * 252.49504 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1349 -1.3714 0.1564 5 6 3.3205 -2.1630 -0.9476 6 1 2.5396 -2.2475 -1.6889 7 6 4.5131 -2.8567 -1.1126 8 7 4.5708 -3.8770 -1.9386 9 14 6.0343 -2.3388 -0.1602 10 1 6.1369 -3.1430 1.0840 11 1 7.2415 -2.5629 -0.9955 12 1 5.9338 -0.8987 0.1881 13 6 3.4024 -1.8555 1.3853 14 8 3.8646 -2.9700 1.5108 15 6 3.1275 -1.0123 2.6037 16 1 3.3253 0.0345 2.3732 17 6 1.6635 -1.1757 3.0171 18 6 4.0345 -1.4622 3.7507 19 6 3.9058 -0.7237 5.0845 20 6 5.1345 -0.4987 4.2010 21 1 -1.0498 -0.0004 0.0002 22 1 3.0091 0.6121 0.8261 23 1 3.0091 0.4106 -0.9425 24 1 5.4035 -4.3610 -2.0541 25 1 1.4517 -0.5279 3.8678 26 1 1.0176 -0.9024 2.1826 27 1 1.4781 -2.2131 3.2954 28 1 4.2545 -2.5292 3.7856 29 1 4.0414 -1.3048 5.9966 30 1 3.1752 0.0829 5.1447 31 1 5.2120 0.4556 3.6801 32 1 6.0785 -0.9316 4.5321 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000300785377.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:02:30 Heat of formation + Delta-G solvation = 56.326965 kcal Electronic energy + Delta-G solvation = -15430.467919 eV Core-core repulsion = 12973.275668 eV Total energy + Delta-G solvation = -2457.192251 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.116 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.40911 -36.96032 -35.03348 -32.79406 -31.67905 -31.23320 -26.79202 -25.19669 -23.70347 -22.07873 -20.70235 -18.86877 -18.02632 -17.16965 -16.08824 -15.31903 -14.95057 -14.30803 -14.02820 -13.55284 -13.21253 -12.80903 -12.69220 -12.32235 -11.99428 -11.75789 -11.56432 -11.22045 -10.93537 -10.58828 -10.37393 -10.11614 -9.96455 -9.93485 -9.64731 -9.56631 -8.59303 -8.40887 -7.64673 -6.19440 -4.01935 3.17910 3.29797 3.32261 3.44792 3.61384 3.80755 4.05679 4.48264 4.53092 4.89758 4.97304 5.16966 5.19725 5.23779 5.45348 5.56353 5.76254 5.77262 5.86168 5.96098 6.05532 6.15113 6.19969 6.27638 6.30523 6.40185 6.52429 6.70450 7.85996 8.04720 8.08415 8.78360 8.93530 9.42397 9.82010 10.87563 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.021269 B = 0.014922 C = 0.009995 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1316.171122 B = 1875.948224 C = 2800.747660 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C -0.170 4.170 3 C 0.199 3.801 4 N -0.466 5.466 5 C -0.350 4.350 6 H 0.091 0.909 7 C 0.097 3.903 8 N -0.866 5.866 9 Si 0.897 3.103 10 H -0.257 1.257 11 H -0.302 1.302 12 H -0.276 1.276 13 C 0.473 3.527 14 O -0.536 6.536 15 C -0.082 4.082 16 H 0.080 0.920 17 C -0.136 4.136 18 C -0.131 4.131 19 C -0.180 4.180 20 C -0.185 4.185 21 H 0.211 0.789 22 H 0.083 0.917 23 H 0.099 0.901 24 H 0.272 0.728 25 H 0.056 0.944 26 H 0.066 0.934 27 H 0.059 0.941 28 H 0.117 0.883 29 H 0.091 0.909 30 H 0.092 0.908 31 H 0.091 0.909 32 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.975 9.823 9.597 14.051 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.245 4.245 2 C -0.171 4.171 3 C 0.076 3.924 4 N -0.188 5.188 5 C -0.476 4.476 6 H 0.108 0.892 7 C -0.112 4.112 8 N -0.500 5.500 9 Si 0.726 3.274 10 H -0.183 1.183 11 H -0.230 1.230 12 H -0.201 1.201 13 C 0.262 3.738 14 O -0.416 6.416 15 C -0.104 4.104 16 H 0.098 0.902 17 C -0.194 4.194 18 C -0.150 4.150 19 C -0.217 4.217 20 C -0.222 4.222 21 H 0.228 0.772 22 H 0.101 0.899 23 H 0.117 0.883 24 H 0.082 0.918 25 H 0.075 0.925 26 H 0.084 0.916 27 H 0.078 0.922 28 H 0.135 0.865 29 H 0.109 0.891 30 H 0.110 0.890 31 H 0.109 0.891 32 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -2.608 9.075 9.545 13.426 hybrid contribution 0.538 0.252 0.286 0.659 sum -2.070 9.327 9.831 13.708 Atomic orbital electron populations 1.24709 0.95725 1.01183 1.02864 1.23952 0.95178 0.99402 0.98607 1.18722 0.83524 0.87306 1.02823 1.43578 1.60171 1.09605 1.05486 1.18740 1.01938 1.25820 1.01127 0.89170 1.25316 0.98504 0.93473 0.93957 1.69746 1.27551 1.16324 1.36410 0.86535 0.80812 0.79274 0.80781 1.18262 1.22981 1.20080 1.20374 0.81822 0.87487 0.84128 1.90546 1.45316 1.20574 1.85168 1.20881 0.96395 0.99561 0.93564 0.90178 1.21703 0.93959 1.02351 1.01378 1.22201 0.99755 0.99162 0.93840 1.22912 1.00756 1.03473 0.94535 1.23005 0.93680 1.01169 1.04368 0.77215 0.89882 0.88264 0.91823 0.92515 0.91555 0.92185 0.86458 0.89082 0.89005 0.89066 0.89071 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.23 -3.57 18.65 29.55 0.55 -3.02 16 2 C -0.17 -3.05 11.76 -37.12 -0.44 -3.49 16 3 C 0.20 3.78 5.68 -6.83 -0.04 3.74 16 4 N -0.47 -11.32 1.99 -117.93 -0.23 -11.55 16 5 C -0.35 -10.05 9.58 -14.93 -0.14 -10.19 16 6 H 0.09 2.75 8.06 -52.49 -0.42 2.33 16 7 C 0.10 2.88 4.85 -17.47 -0.08 2.79 16 8 N -0.87 -26.80 13.96 55.50 0.77 -26.02 16 9 Si 0.90 23.87 25.20 -169.99 -4.28 19.59 16 10 H -0.26 -7.19 6.55 56.52 0.37 -6.82 16 11 H -0.30 -7.83 7.11 56.52 0.40 -7.42 16 12 H -0.28 -6.90 7.11 56.52 0.40 -6.50 16 13 C 0.47 11.34 5.15 -10.99 -0.06 11.29 16 14 O -0.54 -15.08 12.06 5.54 0.07 -15.01 16 15 C -0.08 -1.50 2.23 -91.77 -0.20 -1.70 16 16 H 0.08 1.30 5.74 -51.93 -0.30 1.00 16 17 C -0.14 -2.19 8.97 37.16 0.33 -1.86 16 18 C -0.13 -2.25 4.96 -90.62 -0.45 -2.70 16 19 C -0.18 -2.34 9.77 -26.73 -0.26 -2.60 16 20 C -0.19 -2.70 10.18 -26.73 -0.27 -2.97 16 21 H 0.21 2.46 7.80 -54.10 -0.42 2.04 16 22 H 0.08 1.32 5.81 -51.93 -0.30 1.02 16 23 H 0.10 1.79 8.06 -51.93 -0.42 1.37 16 24 H 0.27 7.90 8.31 -40.82 -0.34 7.56 16 25 H 0.06 0.74 7.39 -51.93 -0.38 0.35 16 26 H 0.07 1.10 5.30 -51.92 -0.28 0.82 16 27 H 0.06 1.02 8.14 -51.93 -0.42 0.59 16 28 H 0.12 2.30 7.33 -51.93 -0.38 1.92 16 29 H 0.09 1.07 8.14 -51.93 -0.42 0.64 16 30 H 0.09 1.06 7.63 -51.93 -0.40 0.67 16 31 H 0.09 1.24 8.05 -51.93 -0.42 0.83 16 32 H 0.09 1.26 8.14 -51.93 -0.42 0.84 16 LS Contribution 269.64 15.07 4.06 4.06 Total: -1.00 -33.57 269.64 -4.83 -38.40 By element: Atomic # 1 Polarization: 5.39 SS G_CDS: -4.15 Total: 1.24 kcal Atomic # 6 Polarization: -9.65 SS G_CDS: -1.06 Total: -10.71 kcal Atomic # 7 Polarization: -38.11 SS G_CDS: 0.54 Total: -37.57 kcal Atomic # 8 Polarization: -15.08 SS G_CDS: 0.07 Total: -15.01 kcal Atomic # 14 Polarization: 23.87 SS G_CDS: -4.28 Total: 19.59 kcal Total LS contribution 4.06 Total: 4.06 kcal Total: -33.57 -4.83 -38.40 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000300785377.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.725 kcal (2) G-P(sol) polarization free energy of solvation -33.572 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.154 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.827 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.398 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.327 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds