Wall clock time and date at job start Sun Mar 29 2020 21:46:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.34512 * 125.79398 * 2 1 4 4 C 1.41377 * 106.84362 * 180.02562 * 3 2 1 5 5 C 1.34505 * 106.84292 * 359.97438 * 4 3 2 6 6 C 1.50702 * 125.79250 * 180.02562 * 5 4 3 7 7 N 1.46902 * 109.47267 * 89.99801 * 6 5 4 8 8 C 1.47961 * 111.00005 * 189.99947 * 7 6 5 9 9 C 1.53934 * 86.17939 * 137.58072 * 8 7 6 10 10 C 1.50703 * 113.73399 * 221.81705 * 9 8 7 11 11 H 1.07999 * 119.99920 * 358.09577 * 10 9 8 12 12 C 1.37877 * 119.99669 * 178.10223 * 10 9 8 13 13 N 1.31510 * 120.00506 * 0.02562 * 12 10 9 14 14 Si 1.86803 * 119.99624 * 179.97438 * 12 10 9 15 15 H 1.48501 * 109.47293 * 359.97438 * 14 12 10 16 16 H 1.48498 * 109.47387 * 119.99775 * 14 12 10 17 17 H 1.48498 * 109.47096 * 240.00236 * 14 12 10 18 18 C 1.48296 * 111.00409 * 289.35248 * 7 6 5 19 19 O 1.34303 * 108.41983 * 0.26286 * 5 4 3 20 20 H 1.08996 * 109.47097 * 90.00366 * 1 2 3 21 21 H 1.09001 * 109.47618 * 210.00688 * 1 2 3 22 22 H 1.09006 * 109.46893 * 330.00294 * 1 2 3 23 23 H 1.08008 * 126.57862 * 0.02562 * 3 2 1 24 24 H 1.08006 * 126.57918 * 180.02562 * 4 3 2 25 25 H 1.08997 * 109.47111 * 329.99567 * 6 5 4 26 26 H 1.09007 * 109.47191 * 209.99730 * 6 5 4 27 27 H 1.09007 * 113.75652 * 23.26342 * 8 7 6 28 28 H 1.08993 * 113.76177 * 251.90248 * 8 7 6 29 29 H 1.09002 * 113.73279 * 90.64057 * 9 8 7 30 30 H 0.96995 * 120.00309 * 180.02562 * 13 12 10 31 31 H 1.09001 * 113.86054 * 108.14174 * 18 7 6 32 32 H 1.09000 * 113.76062 * 336.68481 * 18 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2937 1.0911 0.0000 4 6 3.6308 0.6319 -0.0006 5 6 3.5814 -0.7122 -0.0004 6 6 4.7705 -1.6379 -0.0003 7 7 5.1571 -1.9385 1.3848 8 6 6.4559 -2.6456 1.4312 9 6 6.7963 -1.7277 2.6192 10 6 8.2075 -1.1995 2.5926 11 1 8.8817 -1.4997 1.8042 12 6 8.6378 -0.3330 3.5750 13 7 7.8170 0.0321 4.5355 14 14 10.3872 0.3212 3.5426 15 1 11.1034 -0.2387 2.3684 16 1 10.3599 1.8028 3.4459 17 1 11.0892 -0.0809 4.7878 18 6 5.7580 -0.7508 2.0385 19 8 2.2924 -1.0894 -0.0055 20 1 -0.3633 -0.0001 -1.0276 21 1 -0.3634 -0.8899 0.5139 22 1 -0.3633 0.8901 0.5138 23 1 1.9666 2.1204 0.0004 24 1 4.5213 1.2432 -0.0004 25 1 5.6039 -1.1590 -0.5143 26 1 4.5105 -2.5636 -0.5139 27 1 7.0794 -2.4770 0.5531 28 1 6.3733 -3.6988 1.6995 29 1 6.5158 -2.1415 3.5878 30 1 8.1196 0.6419 5.2264 31 1 5.1182 -0.2911 2.7918 32 1 6.1778 -0.0291 1.3378 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000597194327.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:46:23 Heat of formation + Delta-G solvation = 42.245918 kcal Electronic energy + Delta-G solvation = -14676.623059 eV Core-core repulsion = 12218.820208 eV Total energy + Delta-G solvation = -2457.802851 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.116 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -42.27328 -38.66147 -33.06256 -32.89368 -32.03903 -29.77426 -26.70435 -25.06557 -24.47273 -22.14152 -21.39385 -19.81254 -18.56527 -16.73371 -16.22647 -15.88578 -14.84863 -14.56712 -14.30227 -13.96108 -13.29497 -12.95939 -12.82813 -12.57581 -12.48014 -11.94433 -11.87046 -11.46601 -11.16578 -10.99533 -10.62108 -10.34026 -9.81169 -9.59969 -9.25864 -9.02967 -8.47190 -8.04170 -7.85803 -6.05744 -4.10809 1.98572 2.89937 3.17321 3.27258 3.35703 3.38930 4.39606 4.81775 4.94850 5.14909 5.25300 5.30608 5.39411 5.42530 5.61747 5.68474 5.79630 6.05111 6.10035 6.26008 6.34105 6.43848 6.46432 6.62365 6.74116 6.83188 7.15212 7.16468 7.49822 7.71674 7.88479 8.02596 8.34994 8.92031 9.54402 11.03739 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.046705 B = 0.006200 C = 0.005870 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 599.361673 B = 4514.705968 C = 4769.269885 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 C -0.030 4.030 3 C -0.209 4.209 4 C -0.207 4.207 5 C 0.013 3.987 6 C 0.097 3.903 7 N -0.489 5.489 8 C -0.001 4.001 9 C 0.038 3.962 10 C -0.519 4.519 11 H 0.058 0.942 12 C 0.066 3.934 13 N -0.885 5.885 14 Si 0.890 3.110 15 H -0.273 1.273 16 H -0.284 1.284 17 H -0.283 1.283 18 C 0.018 3.982 19 O -0.171 6.171 20 H 0.075 0.925 21 H 0.073 0.927 22 H 0.084 0.916 23 H 0.143 0.857 24 H 0.145 0.855 25 H 0.068 0.932 26 H 0.080 0.920 27 H 0.058 0.942 28 H 0.069 0.931 29 H 0.059 0.941 30 H 0.261 0.739 31 H 0.067 0.933 32 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.076 0.564 -8.940 13.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.080 4.080 3 C -0.228 4.228 4 C -0.227 4.227 5 C -0.037 4.037 6 C -0.031 4.031 7 N -0.213 5.213 8 C -0.129 4.129 9 C 0.019 3.981 10 C -0.557 4.557 11 H 0.077 0.923 12 C -0.136 4.136 13 N -0.523 5.523 14 Si 0.718 3.282 15 H -0.197 1.197 16 H -0.210 1.210 17 H -0.209 1.209 18 C -0.111 4.111 19 O -0.068 6.068 20 H 0.094 0.906 21 H 0.092 0.908 22 H 0.103 0.897 23 H 0.161 0.839 24 H 0.163 0.837 25 H 0.085 0.915 26 H 0.099 0.901 27 H 0.076 0.924 28 H 0.087 0.913 29 H 0.077 0.923 30 H 0.071 0.929 31 H 0.086 0.914 32 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -10.787 0.061 -8.521 13.747 hybrid contribution 1.635 1.177 -0.393 2.053 sum -9.151 1.238 -8.914 12.835 Atomic orbital electron populations 1.20220 0.85560 1.03772 1.02940 1.22324 0.93839 0.84486 1.07370 1.21497 0.92848 0.99055 1.09422 1.21573 0.98073 0.94040 1.09024 1.22334 0.82696 0.94355 1.04324 1.21085 0.90444 0.96688 0.94873 1.68752 1.26651 1.15192 1.10682 1.24114 0.88753 0.99118 1.00953 1.20328 0.94088 0.90473 0.93216 1.21120 0.96637 1.27444 1.10506 0.92332 1.25014 0.97275 0.96247 0.95091 1.69977 1.35168 1.33838 1.13302 0.86571 0.84913 0.78691 0.78039 1.19716 1.21001 1.20905 1.24110 0.96639 0.92953 0.97375 1.83943 1.16531 1.34876 1.71425 0.90609 0.90768 0.89686 0.83919 0.83692 0.91451 0.90137 0.92400 0.91295 0.92258 0.92906 0.91440 0.92634 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.68 10.42 36.00 0.38 -0.31 16 2 C -0.03 -0.45 7.32 -35.63 -0.26 -0.71 16 3 C -0.21 -3.18 10.81 -39.71 -0.43 -3.61 16 4 C -0.21 -3.56 10.42 -39.71 -0.41 -3.98 16 5 C 0.01 0.24 6.48 -35.63 -0.23 0.01 16 6 C 0.10 1.74 5.36 -4.97 -0.03 1.71 16 7 N -0.49 -10.28 6.26 -239.48 -1.50 -11.78 16 8 C 0.00 -0.02 7.53 -2.76 -0.02 -0.05 16 9 C 0.04 0.96 3.60 -90.84 -0.33 0.63 16 10 C -0.52 -14.06 8.77 -34.44 -0.30 -14.36 16 11 H 0.06 1.55 7.81 -52.49 -0.41 1.14 16 12 C 0.07 1.83 5.46 -17.82 -0.10 1.74 16 13 N -0.89 -25.61 13.29 55.43 0.74 -24.87 16 14 Si 0.89 20.98 29.54 -169.99 -5.02 15.96 16 15 H -0.27 -6.30 7.11 56.52 0.40 -5.90 16 16 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 17 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 18 C 0.02 0.42 6.74 -2.57 -0.02 0.40 16 19 O -0.17 -3.03 10.65 5.70 0.06 -2.97 16 20 H 0.08 0.62 8.14 -51.93 -0.42 0.20 16 21 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 22 H 0.08 0.69 8.14 -51.93 -0.42 0.27 16 23 H 0.14 1.78 8.06 -52.48 -0.42 1.36 16 24 H 0.15 2.40 8.06 -52.48 -0.42 1.97 16 25 H 0.07 1.15 7.69 -51.93 -0.40 0.75 16 26 H 0.08 1.30 8.14 -51.92 -0.42 0.88 16 27 H 0.06 1.16 7.74 -51.92 -0.40 0.75 16 28 H 0.07 1.35 8.14 -51.93 -0.42 0.93 16 29 H 0.06 1.64 8.14 -51.93 -0.42 1.22 16 30 H 0.26 7.16 8.31 -40.82 -0.34 6.82 16 31 H 0.07 1.69 8.14 -51.93 -0.42 1.27 16 32 H 0.06 1.30 7.74 -51.93 -0.40 0.90 16 LS Contribution 276.35 15.07 4.16 4.16 Total: -1.00 -29.82 276.35 -7.86 -37.68 By element: Atomic # 1 Polarization: 4.89 SS G_CDS: -4.55 Total: 0.34 kcal Atomic # 6 Polarization: -16.77 SS G_CDS: -1.75 Total: -18.52 kcal Atomic # 7 Polarization: -35.89 SS G_CDS: -0.76 Total: -36.65 kcal Atomic # 8 Polarization: -3.03 SS G_CDS: 0.06 Total: -2.97 kcal Atomic # 14 Polarization: 20.98 SS G_CDS: -5.02 Total: 15.96 kcal Total LS contribution 4.16 Total: 4.16 kcal Total: -29.82 -7.86 -37.68 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000597194327.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.930 kcal (2) G-P(sol) polarization free energy of solvation -29.823 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.107 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.862 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.684 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds