Wall clock time and date at job start Sun Mar 29 2020 22:45:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.43200 * 179.97438 * 2 1 4 4 C 1.39534 * 120.62723 * 123.78923 * 3 2 1 5 5 N 1.31665 * 120.64667 * 180.02562 * 4 3 2 6 6 C 1.32256 * 122.12004 * 359.70475 * 5 4 3 7 7 Cl 1.73599 * 119.40170 * 180.31421 * 6 5 4 8 8 C 1.38027 * 121.20079 * 0.59337 * 6 5 4 9 9 C 1.39449 * 119.19307 * 359.41817 * 8 6 5 10 10 N 1.38439 * 120.95465 * 180.29784 * 9 8 6 11 11 C 1.36817 * 119.99848 * 0.02562 * 10 9 8 12 12 H 1.08000 * 120.00230 * 0.02562 * 11 10 9 13 13 C 1.38891 * 119.99794 * 179.97438 * 11 10 9 14 14 N 1.31513 * 119.99683 * 180.02562 * 13 11 10 15 15 Si 1.86792 * 120.00091 * 359.97438 * 13 11 10 16 16 H 1.48500 * 109.46933 * 90.00018 * 15 13 11 17 17 H 1.48503 * 109.47131 * 210.00223 * 15 13 11 18 18 H 1.48506 * 109.47522 * 330.00216 * 15 13 11 19 19 H 1.07997 * 119.67708 * 0.03985 * 4 3 2 20 20 H 1.08002 * 120.40703 * 179.70270 * 8 6 5 21 21 H 0.97004 * 119.99993 * 180.02562 * 10 9 8 22 22 H 0.97005 * 120.00028 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2785 0.6687 -0.9979 5 7 4.5952 0.6691 -0.9985 6 6 5.2990 0.0510 -0.0649 7 17 7.0330 0.1039 -0.1298 8 6 4.6801 -0.6402 0.9570 9 6 3.2870 -0.6746 1.0086 10 7 2.6284 -1.3517 2.0207 11 6 3.3453 -1.9994 2.9895 12 1 4.4248 -1.9821 2.9650 13 6 2.6846 -2.6783 4.0052 14 7 3.3736 -3.3004 4.9368 15 14 0.8174 -2.7065 4.0490 16 1 0.3220 -3.8778 3.2822 17 1 0.3566 -2.8058 5.4572 18 1 0.2890 -1.4583 3.4422 19 1 2.7433 1.1907 -1.7772 20 1 5.2675 -1.1444 1.7101 21 1 1.6588 -1.3670 2.0430 22 1 2.9122 -3.7749 5.6460 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC001155531357.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:45:14 Heat of formation + Delta-G solvation = 39.252606 kcal Electronic energy + Delta-G solvation = -12156.495388 eV Core-core repulsion = 9736.753891 eV Total energy + Delta-G solvation = -2419.741497 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 223.021 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -41.18897 -38.15008 -37.47141 -37.23307 -34.53556 -32.15313 -31.58039 -26.99356 -25.39168 -23.28280 -20.99064 -19.60102 -18.81829 -17.53282 -16.66382 -15.85670 -15.70177 -15.55632 -14.97889 -14.49362 -14.34381 -14.25203 -13.88710 -13.86444 -13.00132 -12.85979 -12.45910 -12.30749 -12.17352 -12.10675 -11.13229 -10.48153 -9.85143 -9.39381 -8.70064 -6.08568 -0.25217 0.56180 0.93658 1.19148 1.21595 1.22946 1.65311 1.96772 1.97315 2.61342 2.71769 3.09414 3.12081 3.71663 4.10253 4.26459 4.68754 4.73304 5.03709 5.25365 5.55006 5.70142 6.31488 6.51495 6.95681 6.95944 7.01223 8.41809 Molecular weight = 223.02amu Principal moments of inertia in cm(-1) A = 0.025969 B = 0.010249 C = 0.007368 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1077.932904 B = 2731.291265 C = 3799.375282 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.482 5.482 2 C 0.290 3.710 3 C -0.222 4.222 4 C 0.239 3.761 5 N -0.563 5.563 6 C 0.226 3.774 7 Cl -0.034 7.034 8 C -0.236 4.236 9 C 0.257 3.743 10 N -0.549 5.549 11 C -0.324 4.324 12 H 0.113 0.887 13 C 0.015 3.985 14 N -0.888 5.888 15 Si 0.926 3.074 16 H -0.259 1.259 17 H -0.260 1.260 18 H -0.262 1.262 19 H 0.199 0.801 20 H 0.139 0.861 21 H 0.386 0.614 22 H 0.288 0.712 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.466 4.666 -6.976 8.520 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.161 5.161 2 C -0.022 4.022 3 C -0.238 4.238 4 C 0.077 3.923 5 N -0.280 5.280 6 C 0.069 3.931 7 Cl -0.005 7.005 8 C -0.264 4.264 9 C 0.125 3.875 10 N -0.151 5.151 11 C -0.453 4.453 12 H 0.131 0.869 13 C -0.190 4.190 14 N -0.522 5.522 15 Si 0.748 3.252 16 H -0.184 1.184 17 H -0.184 1.184 18 H -0.187 1.187 19 H 0.215 0.785 20 H 0.157 0.843 21 H 0.222 0.778 22 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 0.454 4.752 -7.106 8.560 hybrid contribution -0.845 -0.796 1.220 1.684 sum -0.391 3.956 -5.885 7.102 Atomic orbital electron populations 1.81202 1.12659 1.12244 1.09956 1.25424 0.92219 0.92045 0.92550 1.16280 0.84402 1.18050 1.05065 1.22730 0.87506 0.89112 0.92983 1.67109 1.07850 1.25821 1.27268 1.21326 0.86928 0.93507 0.91301 1.98367 1.07230 1.96998 1.97935 1.20973 0.92367 1.09651 1.03382 1.17686 0.91503 0.90993 0.87354 1.41192 1.07510 1.44532 1.21845 1.19515 0.94262 1.28461 1.03069 0.86949 1.25654 1.02931 0.95506 0.94942 1.69708 1.38318 1.31093 1.13126 0.85887 0.79590 0.79721 0.79960 1.18356 1.18430 1.18711 0.78466 0.84295 0.77817 0.90175 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -17.71 18.54 19.00 0.35 -17.36 14 2 C 0.29 9.87 14.25 88.33 1.26 11.13 14 3 C -0.22 -7.25 5.77 -21.02 -0.12 -7.37 14 4 C 0.24 6.64 10.92 85.03 0.93 7.57 14 5 N -0.56 -17.57 10.31 -185.84 -1.92 -19.49 14 6 C 0.23 7.47 7.26 84.58 0.61 8.09 14 7 Cl -0.03 -0.99 29.09 -2.72 -0.08 -1.07 14 8 C -0.24 -8.59 9.11 22.51 0.21 -8.39 14 9 C 0.26 9.67 6.66 39.09 0.26 9.94 14 10 N -0.55 -23.06 5.15 -183.06 -0.94 -24.01 14 11 C -0.32 -15.34 10.05 84.07 0.85 -14.50 14 12 H 0.11 5.61 5.98 -2.91 -0.02 5.59 14 13 C 0.02 0.73 5.50 84.90 0.47 1.20 14 14 N -0.89 -45.61 13.96 21.66 0.30 -45.31 14 15 Si 0.93 37.18 27.73 68.60 1.90 39.08 14 16 H -0.26 -10.21 7.11 99.48 0.71 -9.50 14 17 H -0.26 -10.14 7.11 99.48 0.71 -9.44 14 18 H -0.26 -10.30 6.52 99.48 0.65 -9.65 14 19 H 0.20 3.84 8.06 -2.91 -0.02 3.82 14 20 H 0.14 5.31 6.08 -2.91 -0.02 5.29 14 21 H 0.39 15.89 4.72 -92.71 -0.44 15.46 14 22 H 0.29 13.71 8.31 -92.70 -0.77 12.94 14 Total: -1.00 -50.84 228.21 4.87 -45.97 By element: Atomic # 1 Polarization: 13.72 SS G_CDS: 0.80 Total: 14.51 kcal Atomic # 6 Polarization: 3.21 SS G_CDS: 4.46 Total: 7.67 kcal Atomic # 7 Polarization: -103.96 SS G_CDS: -2.21 Total: -106.17 kcal Atomic # 14 Polarization: 37.18 SS G_CDS: 1.90 Total: 39.08 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -0.08 Total: -1.07 kcal Total: -50.84 4.87 -45.97 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001155531357.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.222 kcal (2) G-P(sol) polarization free energy of solvation -50.841 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.381 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.872 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.969 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.253 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds