Wall clock time and date at job start Sun Mar 29 2020 22:50:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31417 * 1 3 3 Si 1.86795 * 120.00145 * 2 1 4 4 H 1.48498 * 109.47279 * 270.00462 * 3 2 1 5 5 H 1.48503 * 109.47096 * 30.00942 * 3 2 1 6 6 H 1.48506 * 109.46806 * 150.00235 * 3 2 1 7 7 C 1.38809 * 119.99714 * 180.02562 * 2 1 3 8 8 H 1.08004 * 120.00174 * 359.97438 * 7 2 1 9 9 O 1.34860 * 120.00026 * 179.97438 * 7 2 1 10 10 C 1.34738 * 117.00089 * 179.97438 * 9 7 2 11 11 O 1.21514 * 120.00289 * 359.97438 * 10 9 7 12 12 C 1.47576 * 119.99889 * 180.02562 * 10 9 7 13 13 C 1.40110 * 120.57874 * 0.29461 * 12 10 9 14 14 C 1.38321 * 118.29767 * 180.26837 * 13 12 10 15 15 C 1.38374 * 119.35118 * 359.43610 * 14 13 12 16 16 N 1.31932 * 121.12153 * 0.30065 * 15 14 13 17 17 C 1.31803 * 121.87180 * 359.97438 * 16 15 14 18 18 Cl 1.73605 * 119.74442 * 179.97438 * 17 16 15 19 19 H 0.96995 * 119.99851 * 359.97438 * 1 2 3 20 20 H 1.07997 * 120.85235 * 359.97438 * 13 12 10 21 21 H 1.08002 * 120.32816 * 179.71917 * 14 13 12 22 22 H 1.07999 * 119.43993 * 180.28235 * 15 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3142 0.0000 0.0000 3 14 2.2482 1.6177 0.0000 4 1 2.4956 2.0464 -1.4000 5 1 1.4457 2.6526 0.7003 6 1 3.5458 1.4400 0.7000 7 6 2.0082 -1.2022 -0.0005 8 1 1.4681 -2.1375 -0.0005 9 8 3.3568 -1.2022 -0.0011 10 6 3.9684 -2.4028 -0.0010 11 8 3.3066 -3.4219 -0.0001 12 6 5.4422 -2.4800 -0.0010 13 6 6.2171 -1.3128 0.0052 14 6 7.5944 -1.4401 -0.0008 15 6 8.1588 -2.7035 -0.0007 16 7 7.4057 -3.7868 -0.0009 17 6 6.0894 -3.7193 -0.0008 18 17 5.1520 -5.1805 -0.0018 19 1 -0.4850 0.8400 0.0004 20 1 5.7510 -0.3386 0.0096 21 1 8.2233 -0.5620 -0.0009 22 1 9.2341 -2.8046 -0.0007 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000306426385.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:50:34 Heat of formation + Delta-G solvation = -38.212527 kcal Electronic energy + Delta-G solvation = -13026.341171 eV Core-core repulsion = 10380.491731 eV Total energy + Delta-G solvation = -2645.849440 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 227.014 amu Computer time = 0.14 seconds Orbital eigenvalues (eV) -40.27729 -38.84612 -36.30062 -35.37668 -32.80120 -32.34077 -31.05840 -26.10300 -24.15314 -23.34252 -20.55150 -18.14632 -17.59178 -16.93644 -16.23968 -15.34399 -15.08416 -14.51228 -14.02890 -13.98604 -13.29064 -12.67566 -12.50325 -11.99568 -11.50001 -11.36830 -10.93993 -10.63951 -10.50740 -9.91203 -9.84400 -9.77526 -8.93504 -8.90748 -8.78820 -6.50699 -4.20490 0.64382 1.11434 2.08584 3.06200 3.14728 3.23150 3.27053 3.82419 3.96458 4.12450 4.54301 4.79544 4.91831 5.02012 5.11046 5.24476 5.88605 5.98979 6.24886 6.47195 7.58136 7.67203 7.91084 8.51560 8.86236 9.53946 10.56834 Molecular weight = 227.01amu Principal moments of inertia in cm(-1) A = 0.035293 B = 0.009381 C = 0.007430 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 793.172387 B = 2984.158855 C = 3767.487669 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.863 5.863 2 C 0.065 3.935 3 Si 0.905 3.095 4 H -0.271 1.271 5 H -0.280 1.280 6 H -0.259 1.259 7 C -0.369 4.369 8 H 0.114 0.886 9 O -0.242 6.242 10 C 0.439 3.561 11 O -0.510 6.510 12 C -0.124 4.124 13 C -0.027 4.027 14 C -0.182 4.182 15 C 0.122 3.878 16 N -0.485 5.485 17 C 0.211 3.789 18 Cl 0.007 6.993 19 H 0.282 0.718 20 H 0.155 0.845 21 H 0.145 0.855 22 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.751 -0.265 0.017 14.753 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.501 5.501 2 C -0.140 4.140 3 Si 0.730 3.270 4 H -0.197 1.197 5 H -0.205 1.205 6 H -0.184 1.184 7 C -0.444 4.444 8 H 0.132 0.868 9 O -0.150 6.150 10 C 0.285 3.715 11 O -0.405 6.405 12 C -0.129 4.129 13 C -0.053 4.053 14 C -0.202 4.202 15 C -0.035 4.035 16 N -0.197 5.197 17 C 0.047 3.953 18 Cl 0.036 6.964 19 H 0.093 0.907 20 H 0.173 0.827 21 H 0.163 0.837 22 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 14.654 -1.346 0.020 14.716 hybrid contribution -0.237 1.467 -0.010 1.486 sum 14.417 0.121 0.010 14.418 Atomic orbital electron populations 1.69586 1.05777 1.28746 1.46036 1.24590 0.95049 0.98799 0.95559 0.86217 0.80328 0.81384 0.79038 1.19653 1.20521 1.18359 1.20757 0.75896 0.97225 1.50572 0.86842 1.83495 1.24139 1.30896 1.76498 1.19984 0.86883 0.83225 0.81384 1.90775 1.65793 1.35233 1.48706 1.20050 0.93508 0.93066 1.06241 1.22020 0.93368 0.98889 0.90995 1.22176 0.95428 0.99446 1.03113 1.22806 0.99899 0.87082 0.93682 1.67155 1.04412 1.33804 1.14306 1.21790 0.89215 0.88155 0.96177 1.98447 1.68902 1.33530 1.95568 0.90730 0.82716 0.83677 0.81702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.86 -24.75 13.96 55.49 0.77 -23.98 14 2 C 0.07 1.80 5.49 -17.52 -0.10 1.70 14 3 Si 0.91 20.33 28.62 -169.99 -4.86 15.47 14 4 H -0.27 -5.93 7.11 56.52 0.40 -5.53 14 5 H -0.28 -6.09 7.11 56.52 0.40 -5.69 14 6 H -0.26 -5.57 7.11 56.52 0.40 -5.17 14 7 C -0.37 -10.65 10.11 30.94 0.31 -10.33 14 8 H 0.11 3.61 7.09 -52.48 -0.37 3.24 14 9 O -0.24 -6.19 7.90 -21.67 -0.17 -6.36 14 10 C 0.44 10.50 7.83 34.54 0.27 10.77 14 11 O -0.51 -13.37 13.25 -19.28 -0.26 -13.63 14 12 C -0.12 -2.37 5.89 -104.80 -0.62 -2.99 14 13 C -0.03 -0.41 9.74 -38.85 -0.38 -0.78 14 14 C -0.18 -2.07 10.09 -39.50 -0.40 -2.47 14 15 C 0.12 1.45 11.17 -17.46 -0.20 1.25 14 16 N -0.49 -7.62 10.33 -9.98 -0.10 -7.73 14 17 C 0.21 3.85 7.32 -16.98 -0.12 3.73 14 18 Cl 0.01 0.12 26.20 -51.86 -1.36 -1.24 14 19 H 0.28 7.36 8.31 -40.82 -0.34 7.02 14 20 H 0.16 2.26 7.70 -52.49 -0.40 1.85 14 21 H 0.15 1.09 8.06 -52.49 -0.42 0.67 14 22 H 0.17 1.26 8.06 -52.49 -0.42 0.83 14 LS Contribution 228.44 15.07 3.44 3.44 Total: -1.00 -31.41 228.44 -4.52 -35.92 By element: Atomic # 1 Polarization: -2.02 SS G_CDS: -0.76 Total: -2.77 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -1.23 Total: 0.87 kcal Atomic # 7 Polarization: -32.37 SS G_CDS: 0.67 Total: -31.70 kcal Atomic # 8 Polarization: -19.57 SS G_CDS: -0.43 Total: -19.99 kcal Atomic # 14 Polarization: 20.33 SS G_CDS: -4.86 Total: 15.47 kcal Atomic # 17 Polarization: 0.12 SS G_CDS: -1.36 Total: -1.24 kcal Total LS contribution 3.44 Total: 3.44 kcal Total: -31.41 -4.52 -35.92 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000306426385.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.288 kcal (2) G-P(sol) polarization free energy of solvation -31.405 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.693 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.519 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.925 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.14 seconds