Wall clock time and date at job start Sun Mar 29 2020 22:24:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35463 * 116.99951 * 2 1 4 4 N 1.32348 * 119.13591 * 359.97438 * 3 2 1 5 5 C 1.32607 * 120.93485 * 180.02562 * 4 3 2 6 6 Cl 1.73596 * 120.38040 * 180.02562 * 5 4 3 7 7 C 1.38376 * 119.23520 * 359.74939 * 5 4 3 8 8 C 1.39577 * 118.42835 * 0.48741 * 7 5 4 9 9 N 1.38525 * 120.49575 * 179.78170 * 8 7 5 10 10 C 1.36945 * 120.00025 * 359.72775 * 9 8 7 11 11 H 1.08005 * 119.99882 * 359.97438 * 10 9 8 12 12 C 1.38842 * 120.00119 * 179.72672 * 10 9 8 13 13 N 1.31537 * 119.99954 * 359.97438 * 12 10 9 14 14 Si 1.86800 * 120.00208 * 179.97438 * 12 10 9 15 15 H 1.48500 * 109.47040 * 0.02562 * 14 12 10 16 16 H 1.48500 * 109.47048 * 119.99498 * 14 12 10 17 17 H 1.48496 * 109.47574 * 239.99748 * 14 12 10 18 18 N 1.32218 * 119.14137 * 180.02562 * 3 2 1 19 19 H 1.08997 * 109.47629 * 59.99750 * 1 2 3 20 20 H 1.08995 * 109.47004 * 180.02562 * 1 2 3 21 21 H 1.09004 * 109.46626 * 299.99215 * 1 2 3 22 22 H 1.07994 * 120.78769 * 180.27428 * 7 5 4 23 23 H 0.97005 * 120.00155 * 179.72559 * 9 8 7 24 24 H 0.97004 * 120.00318 * 180.02562 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0440 1.2070 0.0000 4 7 1.3065 2.3059 -0.0005 5 6 1.8711 3.5058 -0.0010 6 17 0.8899 4.9378 -0.0010 7 6 3.2514 3.6032 0.0042 8 6 4.0007 2.4255 -0.0005 9 7 5.3851 2.4731 -0.0001 10 6 6.0287 3.6819 -0.0006 11 1 5.4568 4.5982 -0.0018 12 6 7.4163 3.7296 0.0056 13 7 8.1127 2.6138 0.0124 14 14 8.2942 5.3785 0.0041 15 1 7.2910 6.4734 -0.0035 16 1 9.1391 5.4905 1.2202 17 1 9.1503 5.4825 -1.2047 18 7 3.3652 1.2564 -0.0005 19 1 -0.3634 0.5138 -0.8899 20 1 -0.3633 -1.0276 0.0005 21 1 -0.3633 0.5137 0.8901 22 1 3.7376 4.5675 0.0084 23 1 5.8987 1.6502 0.0006 24 1 9.0821 2.6471 0.0171 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001155531479.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:24:01 Heat of formation + Delta-G solvation = 9.875171 kcal Electronic energy + Delta-G solvation = -13326.156096 eV Core-core repulsion = 10687.373168 eV Total energy + Delta-G solvation = -2638.782928 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 229.036 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -40.11669 -37.83715 -36.33333 -35.49300 -32.74295 -31.50227 -29.27256 -27.09166 -25.30062 -23.15753 -21.90704 -18.62026 -18.12370 -16.73126 -15.95268 -15.72801 -14.89041 -14.47967 -14.05267 -13.66696 -13.65996 -13.45337 -12.13939 -11.91837 -11.63069 -11.61117 -11.13860 -11.05712 -10.71845 -10.57093 -10.17807 -9.86369 -9.44477 -8.53935 -8.33523 -7.59162 -6.91121 -4.17166 1.93274 2.19268 2.28405 3.01392 3.01539 3.07114 3.25236 3.81982 4.46872 4.70910 4.97850 5.33971 5.52733 5.61177 5.83108 5.89028 6.12343 6.36018 6.77675 6.99665 7.38596 7.58103 7.94227 8.39470 8.82265 8.95635 9.37578 10.23352 Molecular weight = 229.04amu Principal moments of inertia in cm(-1) A = 0.030650 B = 0.007852 C = 0.006272 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 913.318956 B = 3565.042033 C = 4463.212326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.052 3.948 2 O -0.299 6.299 3 C 0.550 3.450 4 N -0.656 5.656 5 C 0.270 3.730 6 Cl -0.054 7.054 7 C -0.305 4.305 8 C 0.399 3.601 9 N -0.491 5.491 10 C -0.309 4.309 11 H 0.113 0.887 12 C 0.032 3.968 13 N -0.867 5.867 14 Si 0.942 3.058 15 H -0.262 1.262 16 H -0.275 1.275 17 H -0.275 1.275 18 N -0.606 5.606 19 H 0.057 0.943 20 H 0.092 0.908 21 H 0.057 0.943 22 H 0.143 0.857 23 H 0.410 0.590 24 H 0.283 0.717 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.919 1.803 -0.016 8.122 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.044 4.044 2 O -0.201 6.201 3 C 0.243 3.757 4 N -0.399 5.399 5 C 0.107 3.893 6 Cl -0.026 7.026 7 C -0.338 4.338 8 C 0.149 3.851 9 N -0.096 5.096 10 C -0.440 4.440 11 H 0.130 0.870 12 C -0.176 4.176 13 N -0.502 5.502 14 Si 0.767 3.233 15 H -0.186 1.186 16 H -0.201 1.201 17 H -0.201 1.201 18 N -0.348 5.348 19 H 0.076 0.924 20 H 0.110 0.890 21 H 0.076 0.924 22 H 0.160 0.840 23 H 0.247 0.753 24 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -7.880 0.931 -0.015 7.935 hybrid contribution 0.762 1.346 0.004 1.547 sum -7.119 2.277 -0.011 7.474 Atomic orbital electron populations 1.22770 0.76982 1.02160 1.02506 1.86002 1.22340 1.23601 1.88134 1.19630 0.84859 0.83162 0.88042 1.67026 1.40990 0.97428 1.34482 1.20811 0.87602 0.86827 0.94098 1.98343 1.72560 1.35167 1.96521 1.21306 0.91630 1.00195 1.20700 1.17659 0.85860 0.86716 0.94912 1.40857 1.00057 1.10204 1.58462 1.19960 0.89851 0.85250 1.48985 0.86968 1.25512 0.96424 0.99972 0.95701 1.69696 1.08602 1.27288 1.44586 0.85598 0.79339 0.79969 0.78373 1.18598 1.20069 1.20058 1.66759 1.07346 1.28370 1.32357 0.92424 0.88974 0.92437 0.83956 0.75282 0.90698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.73 10.36 101.05 1.05 1.78 14 2 O -0.30 -5.79 10.56 -18.08 -0.19 -5.98 14 3 C 0.55 12.12 8.49 -91.31 -0.77 11.34 14 4 N -0.66 -13.77 9.21 -11.90 -0.11 -13.88 14 5 C 0.27 5.53 7.33 -17.17 -0.13 5.41 14 6 Cl -0.05 -0.91 29.15 -51.86 -1.51 -2.43 14 7 C -0.31 -6.63 9.19 -39.03 -0.36 -6.99 14 8 C 0.40 9.46 7.67 -154.75 -1.19 8.27 14 9 N -0.49 -11.98 5.43 -11.00 -0.06 -12.04 14 10 C -0.31 -7.44 9.56 -15.04 -0.14 -7.58 14 11 H 0.11 2.55 5.73 -52.48 -0.30 2.25 14 12 C 0.03 0.75 5.50 -17.45 -0.10 0.66 14 13 N -0.87 -21.64 13.05 55.49 0.72 -20.92 14 14 Si 0.94 18.21 29.55 -169.99 -5.02 13.19 14 15 H -0.26 -4.91 7.11 56.52 0.40 -4.50 14 16 H -0.28 -5.31 7.11 56.52 0.40 -4.91 14 17 H -0.28 -5.31 7.11 56.52 0.40 -4.91 14 18 N -0.61 -14.48 10.50 -13.96 -0.15 -14.62 14 19 H 0.06 0.80 8.09 -51.93 -0.42 0.38 14 20 H 0.09 0.96 8.14 -51.93 -0.42 0.54 14 21 H 0.06 0.79 8.09 -51.93 -0.42 0.37 14 22 H 0.14 2.93 6.06 -52.49 -0.32 2.61 14 23 H 0.41 10.33 8.02 -40.82 -0.33 10.01 14 24 H 0.28 6.56 8.31 -40.82 -0.34 6.22 14 LS Contribution 239.30 15.07 3.61 3.61 Total: -1.00 -26.45 239.30 -5.69 -32.14 By element: Atomic # 1 Polarization: 9.39 SS G_CDS: -1.34 Total: 8.05 kcal Atomic # 6 Polarization: 14.52 SS G_CDS: -1.64 Total: 12.88 kcal Atomic # 7 Polarization: -61.87 SS G_CDS: 0.41 Total: -61.46 kcal Atomic # 8 Polarization: -5.79 SS G_CDS: -0.19 Total: -5.98 kcal Atomic # 14 Polarization: 18.21 SS G_CDS: -5.02 Total: 13.19 kcal Atomic # 17 Polarization: -0.91 SS G_CDS: -1.51 Total: -2.43 kcal Total LS contribution 3.61 Total: 3.61 kcal Total: -26.45 -5.69 -32.14 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001155531479.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.020 kcal (2) G-P(sol) polarization free energy of solvation -26.450 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.570 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.145 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.875 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds