Wall clock time and date at job start Sun Mar 29 2020 22:41:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42896 * 114.00122 * 2 1 4 4 C 1.52999 * 109.47306 * 180.02562 * 3 2 1 5 5 H 1.09007 * 109.51242 * 304.89736 * 4 3 2 6 6 C 1.53298 * 109.51426 * 184.74655 * 4 3 2 7 7 N 1.47154 * 108.38468 * 187.77125 * 6 4 3 8 8 C 1.34773 * 120.98675 * 230.55870 * 7 6 4 9 9 O 1.21694 * 119.99836 * 354.77000 * 8 7 6 10 10 C 1.46366 * 120.00173 * 174.77348 * 8 7 6 11 11 H 1.07997 * 120.00656 * 340.82637 * 10 8 7 12 12 C 1.40053 * 120.00059 * 160.83008 * 10 8 7 13 13 N 1.30673 * 120.00288 * 170.85564 * 12 10 8 14 14 Si 1.86807 * 119.99883 * 350.85711 * 12 10 8 15 15 H 1.48495 * 109.47259 * 84.85142 * 14 12 10 16 16 H 1.48497 * 109.47129 * 204.85342 * 14 12 10 17 17 H 1.48502 * 109.46690 * 324.84931 * 14 12 10 18 18 C 1.47157 * 118.03217 * 50.53828 * 7 6 4 19 19 C 1.53293 * 108.38529 * 309.46067 * 18 7 6 20 20 O 1.42961 * 109.22149 * 52.30598 * 19 18 7 21 21 H 1.09000 * 109.47013 * 300.00140 * 1 2 3 22 22 H 1.08997 * 109.47381 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.46941 * 59.99965 * 1 2 3 24 24 H 1.08995 * 109.47336 * 300.00100 * 3 2 1 25 25 H 1.09007 * 109.47127 * 60.00245 * 3 2 1 26 26 H 1.08998 * 109.68309 * 307.49509 * 6 4 3 27 27 H 1.08999 * 109.68019 * 68.05448 * 6 4 3 28 28 H 0.97001 * 119.99966 * 179.97438 * 13 12 10 29 29 H 1.09004 * 109.67677 * 189.74035 * 18 7 6 30 30 H 1.09000 * 109.68026 * 69.18797 * 18 7 6 31 31 H 1.09003 * 109.51260 * 292.38045 * 19 18 7 32 32 H 1.09000 * 109.55660 * 172.25098 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 3.5355 1.1846 -0.0006 5 1 3.8524 0.5697 0.8418 6 6 4.1597 2.5796 0.1189 7 7 5.6135 2.4555 -0.0719 8 6 6.4777 2.9993 0.8077 9 8 6.0629 3.6840 1.7242 10 6 7.9152 2.7665 0.6607 11 1 8.2701 1.9376 0.0661 12 6 8.8307 3.6185 1.2910 13 7 10.1011 3.3129 1.3108 14 14 8.2358 5.1919 2.1035 15 1 7.7759 4.8931 3.4835 16 1 9.3484 6.1741 2.1543 17 1 7.1101 5.7592 1.3185 18 6 6.0958 1.7196 -1.2514 19 6 5.3773 0.3665 -1.3042 20 8 3.9661 0.5794 -1.2222 21 1 -0.3633 0.5139 0.8900 22 1 -0.3634 -1.0276 0.0005 23 1 -0.3633 0.5138 -0.8900 24 1 1.6887 1.8463 -0.8899 25 1 1.6886 1.8464 0.8901 26 1 3.7436 3.2348 -0.6464 27 1 3.9530 2.9908 1.1070 28 1 10.7352 3.9033 1.7471 29 1 7.1713 1.5613 -1.1708 30 1 5.8746 2.2882 -2.1547 31 1 5.7017 -0.2509 -0.4665 32 1 5.6157 -0.1369 -2.2412 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000613972739.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:41:24 Heat of formation + Delta-G solvation = -129.437410 kcal Electronic energy + Delta-G solvation = -16480.461420 eV Core-core repulsion = 13634.301719 eV Total energy + Delta-G solvation = -2846.159702 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 229.115 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -39.46339 -37.78537 -36.93917 -33.66372 -32.92040 -32.05588 -28.10378 -27.53308 -26.26169 -24.49647 -22.78520 -21.09002 -19.20937 -16.98330 -16.59281 -16.41642 -16.13974 -15.49973 -15.09028 -14.89342 -14.40662 -14.11997 -13.83366 -13.51319 -12.56997 -12.41975 -12.19716 -11.99382 -11.81105 -11.49744 -11.25484 -10.96918 -10.77052 -10.49599 -10.25694 -9.73351 -9.58222 -9.53490 -9.06060 -8.02334 -7.60580 -6.67277 -4.88789 3.39265 3.43653 3.62683 3.65158 3.90067 4.11952 4.19690 4.48270 5.04998 5.17242 5.24190 5.27373 5.31955 5.33378 5.43511 5.53367 5.56243 5.64188 5.80222 5.84921 5.97131 6.17758 6.27975 6.43183 6.96226 7.10690 7.45068 7.50709 7.79775 8.23851 8.64011 9.04984 9.93720 10.33840 Molecular weight = 229.11amu Principal moments of inertia in cm(-1) A = 0.046069 B = 0.006903 C = 0.006224 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 607.636399 B = 4055.397744 C = 4497.469702 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.384 6.384 3 C 0.073 3.927 4 C 0.080 3.920 5 H 0.068 0.932 6 C 0.094 3.906 7 N -0.634 5.634 8 C 0.557 3.443 9 O -0.615 6.615 10 C -0.534 4.534 11 H 0.092 0.908 12 C 0.104 3.896 13 N -0.827 5.827 14 Si 0.962 3.038 15 H -0.275 1.275 16 H -0.317 1.317 17 H -0.268 1.268 18 C 0.086 3.914 19 C 0.047 3.953 20 O -0.377 6.377 21 H 0.039 0.961 22 H 0.084 0.916 23 H 0.040 0.960 24 H 0.058 0.942 25 H 0.066 0.934 26 H 0.058 0.942 27 H 0.095 0.905 28 H 0.283 0.717 29 H 0.108 0.892 30 H 0.057 0.943 31 H 0.053 0.947 32 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.825 -4.373 -4.791 14.372 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.302 6.302 3 C -0.004 4.004 4 C 0.021 3.979 5 H 0.086 0.914 6 C -0.030 4.030 7 N -0.369 5.369 8 C 0.366 3.634 9 O -0.506 6.506 10 C -0.570 4.570 11 H 0.109 0.891 12 C -0.114 4.114 13 N -0.457 5.457 14 Si 0.794 3.206 15 H -0.201 1.201 16 H -0.248 1.248 17 H -0.193 1.193 18 C -0.038 4.038 19 C -0.030 4.030 20 O -0.296 6.296 21 H 0.058 0.942 22 H 0.102 0.898 23 H 0.058 0.942 24 H 0.076 0.924 25 H 0.084 0.916 26 H 0.076 0.924 27 H 0.113 0.887 28 H 0.093 0.907 29 H 0.126 0.874 30 H 0.076 0.924 31 H 0.072 0.928 32 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -12.835 -4.254 -4.446 14.234 hybrid contribution -0.157 0.824 0.421 0.939 sum -12.992 -3.429 -4.025 14.027 Atomic orbital electron populations 1.22725 0.81416 1.02569 0.99809 1.87946 1.19271 1.27644 1.95376 1.22494 0.91935 0.85065 1.00945 1.22474 0.92210 0.94894 0.88336 0.91429 1.21772 0.83308 0.94745 1.03175 1.47802 1.03926 1.59033 1.26136 1.18381 0.87208 0.77803 0.79964 1.90238 1.78970 1.45359 1.36060 1.20714 0.87391 1.15672 1.33187 0.89053 1.25715 0.93990 0.99711 0.91991 1.69549 1.03076 1.37134 1.35913 0.85327 0.75635 0.78810 0.80875 1.20134 1.24805 1.19307 1.22208 1.01347 0.91763 0.88515 1.23035 0.80936 0.96908 1.02165 1.87902 1.22788 1.81394 1.37512 0.94229 0.89783 0.94153 0.92367 0.91641 0.92401 0.88721 0.90709 0.87418 0.92447 0.92843 0.88407 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.31 11.01 101.05 1.11 1.43 16 2 O -0.38 -5.52 10.67 -39.97 -0.43 -5.94 16 3 C 0.07 1.00 5.60 37.16 0.21 1.20 16 4 C 0.08 1.33 3.06 -26.58 -0.08 1.25 16 5 H 0.07 1.21 8.14 -51.92 -0.42 0.79 16 6 C 0.09 1.77 5.91 -3.53 -0.02 1.75 16 7 N -0.63 -13.96 3.02 -173.93 -0.53 -14.48 16 8 C 0.56 14.87 7.20 -12.99 -0.09 14.78 16 9 O -0.61 -17.80 12.26 5.19 0.06 -17.73 16 10 C -0.53 -14.89 9.22 -35.63 -0.33 -15.22 16 11 H 0.09 2.51 6.24 -52.49 -0.33 2.18 16 12 C 0.10 2.94 5.52 -17.36 -0.10 2.84 16 13 N -0.83 -23.24 13.92 55.55 0.77 -22.47 16 14 Si 0.96 25.17 25.84 -169.99 -4.39 20.78 16 15 H -0.28 -7.43 7.11 56.52 0.40 -7.03 16 16 H -0.32 -7.81 7.11 56.52 0.40 -7.41 16 17 H -0.27 -7.32 6.82 56.52 0.39 -6.94 16 18 C 0.09 1.58 6.56 -3.53 -0.02 1.55 16 19 C 0.05 0.76 6.98 37.31 0.26 1.02 16 20 O -0.38 -6.52 10.35 -39.97 -0.41 -6.93 16 21 H 0.04 0.34 8.14 -51.93 -0.42 -0.08 16 22 H 0.08 0.70 8.14 -51.93 -0.42 0.28 16 23 H 0.04 0.35 8.14 -51.93 -0.42 -0.07 16 24 H 0.06 0.74 8.14 -51.93 -0.42 0.31 16 25 H 0.07 0.78 8.14 -51.92 -0.42 0.36 16 26 H 0.06 1.00 8.14 -51.93 -0.42 0.57 16 27 H 0.09 1.86 7.12 -51.93 -0.37 1.49 16 28 H 0.28 7.31 8.29 -40.82 -0.34 6.97 16 29 H 0.11 2.08 5.51 -51.93 -0.29 1.79 16 30 H 0.06 0.98 8.14 -51.93 -0.42 0.56 16 31 H 0.05 0.89 8.14 -51.93 -0.42 0.46 16 32 H 0.10 1.27 8.14 -51.93 -0.42 0.85 16 LS Contribution 266.74 15.07 4.02 4.02 Total: -1.00 -32.75 266.74 -4.32 -37.07 By element: Atomic # 1 Polarization: -0.55 SS G_CDS: -4.36 Total: -4.91 kcal Atomic # 6 Polarization: 9.66 SS G_CDS: 0.94 Total: 10.59 kcal Atomic # 7 Polarization: -37.20 SS G_CDS: 0.25 Total: -36.95 kcal Atomic # 8 Polarization: -29.83 SS G_CDS: -0.78 Total: -30.60 kcal Atomic # 14 Polarization: 25.17 SS G_CDS: -4.39 Total: 20.78 kcal Total LS contribution 4.02 Total: 4.02 kcal Total: -32.75 -4.32 -37.07 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000613972739.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.366 kcal (2) G-P(sol) polarization free energy of solvation -32.747 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.113 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.325 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.072 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.437 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds