Wall clock time and date at job start Sun Mar 29 2020 21:31:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42896 * 114.00132 * 2 1 4 4 C 1.53009 * 109.57518 * 62.94797 * 3 2 1 5 5 O 1.42897 * 109.46522 * 59.03111 * 4 3 2 6 6 C 1.53123 * 109.52746 * 302.79139 * 3 2 1 7 7 C 1.53033 * 109.27730 * 297.74815 * 6 3 2 8 8 N 1.46852 * 109.52076 * 300.81844 * 7 6 3 9 9 C 1.46903 * 110.99699 * 185.83882 * 8 7 6 10 10 C 1.50696 * 109.46887 * 170.00229 * 9 8 7 11 11 H 1.08004 * 120.00276 * 359.97438 * 10 9 8 12 12 C 1.37878 * 120.00043 * 180.02562 * 10 9 8 13 13 N 1.31516 * 119.99902 * 0.02562 * 12 10 9 14 14 Si 1.86802 * 120.00123 * 179.97438 * 12 10 9 15 15 H 1.48499 * 109.47124 * 359.97438 * 14 12 10 16 16 H 1.48496 * 109.46978 * 120.00182 * 14 12 10 17 17 H 1.48506 * 109.47066 * 239.99944 * 14 12 10 18 18 C 1.46849 * 111.19890 * 61.74474 * 8 7 6 19 19 C 1.53034 * 109.52238 * 298.25633 * 18 8 7 20 20 H 1.09001 * 109.47107 * 66.04041 * 1 2 3 21 21 H 1.08996 * 109.47248 * 186.03989 * 1 2 3 22 22 H 1.09001 * 109.46939 * 306.04392 * 1 2 3 23 23 H 1.08996 * 109.47481 * 179.03209 * 4 3 2 24 24 H 1.08998 * 109.46529 * 299.03899 * 4 3 2 25 25 H 0.96702 * 113.99603 * 179.97438 * 5 4 3 26 26 H 1.09001 * 109.50533 * 177.80707 * 6 3 2 27 27 H 1.08998 * 109.50273 * 57.68673 * 6 3 2 28 28 H 1.09008 * 109.46465 * 60.83205 * 7 6 3 29 29 H 1.09000 * 109.46525 * 180.81341 * 7 6 3 30 30 H 1.09002 * 109.47404 * 289.99840 * 9 8 7 31 31 H 1.08997 * 109.47432 * 49.99775 * 9 8 7 32 32 H 0.97000 * 119.99823 * 180.02562 * 13 12 10 33 33 H 1.09000 * 109.45980 * 58.27144 * 18 8 7 34 34 H 1.08994 * 109.46314 * 178.24132 * 18 8 7 35 35 H 1.09000 * 109.50556 * 179.12309 * 19 18 8 36 36 H 1.09002 * 109.50460 * 299.20280 * 19 18 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.6198 2.0404 1.2839 5 8 2.0760 1.2969 2.4158 6 6 1.5044 2.0909 -1.2132 7 6 1.9502 1.3834 -2.4948 8 7 3.4159 1.2955 -2.5224 9 6 3.8863 0.7467 -3.8013 10 6 5.3829 0.8980 -3.8926 11 1 5.9298 1.3564 -3.0820 12 6 6.0538 0.4521 -5.0116 13 7 5.3877 -0.1048 -5.9994 14 14 7.9089 0.6402 -5.1252 15 1 8.4164 1.2949 -3.8927 16 1 8.5344 -0.6989 -5.2685 17 1 8.2504 1.4749 -6.3050 18 6 3.9219 0.5055 -1.3927 19 6 3.5348 1.1868 -0.0782 20 1 -0.3633 0.4173 -0.9391 21 1 -0.3633 -1.0219 0.1081 22 1 -0.3633 0.6047 0.8310 23 1 2.0780 3.0294 1.2902 24 1 0.5355 2.1419 1.3289 25 1 1.8631 1.7051 3.2662 26 1 1.9174 3.0994 -1.1918 27 1 0.4160 2.1421 -1.1856 28 1 1.5257 0.3798 -2.5222 29 1 1.6040 1.9479 -3.3606 30 1 3.6236 -0.3095 -3.8621 31 1 3.4157 1.2860 -4.6233 32 1 5.8597 -0.4188 -6.7864 33 1 3.4880 -0.4939 -1.4253 34 1 5.0074 0.4323 -1.4580 35 1 3.8971 0.5920 0.7604 36 1 3.9803 2.1808 -0.0385 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000401742310.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:31:18 Heat of formation + Delta-G solvation = -92.874792 kcal Electronic energy + Delta-G solvation = -17080.690672 eV Core-core repulsion = 14371.949539 eV Total energy + Delta-G solvation = -2708.741133 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 229.146 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.76828 -36.65669 -35.94682 -33.04099 -31.62531 -30.45834 -27.79539 -26.61922 -25.51788 -22.63768 -22.27996 -20.56372 -19.20661 -17.33952 -16.22730 -16.07556 -15.66601 -15.13074 -14.99639 -14.25727 -13.88889 -13.64643 -13.36014 -12.92783 -12.41632 -12.29391 -12.01360 -11.86107 -11.72185 -11.15703 -10.92892 -10.76561 -10.55743 -10.45798 -10.31056 -10.12736 -9.74109 -9.68271 -9.22224 -9.06316 -8.38466 -7.11903 -5.97593 -3.98424 3.34620 3.41672 3.46937 3.85268 4.28990 4.47284 4.88491 4.95404 5.03863 5.21280 5.22728 5.38055 5.44597 5.49803 5.55690 5.67898 5.77332 5.95876 5.97408 6.11775 6.24818 6.37264 6.41598 6.49022 6.81487 6.89161 7.37920 7.45165 7.46347 7.58200 7.87032 8.16890 8.29996 8.63549 9.09834 9.65566 11.13492 Molecular weight = 229.15amu Principal moments of inertia in cm(-1) A = 0.044642 B = 0.006468 C = 0.006032 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 627.060231 B = 4327.680607 C = 4641.088256 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.121 3.879 4 C 0.053 3.947 5 O -0.558 6.558 6 C -0.138 4.138 7 C 0.061 3.939 8 N -0.537 5.537 9 C 0.193 3.807 10 C -0.504 4.504 11 H 0.064 0.936 12 C 0.054 3.946 13 N -0.900 5.900 14 Si 0.897 3.103 15 H -0.272 1.272 16 H -0.285 1.285 17 H -0.285 1.285 18 C 0.067 3.933 19 C -0.096 4.096 20 H 0.041 0.959 21 H 0.080 0.920 22 H 0.037 0.963 23 H 0.054 0.946 24 H 0.043 0.957 25 H 0.371 0.629 26 H 0.079 0.921 27 H 0.061 0.939 28 H 0.027 0.973 29 H 0.067 0.933 30 H -0.009 1.009 31 H 0.029 0.971 32 H 0.260 0.740 33 H 0.028 0.972 34 H 0.083 0.917 35 H 0.072 0.928 36 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.749 4.225 13.531 17.204 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.281 6.281 3 C 0.081 3.919 4 C -0.026 4.026 5 O -0.362 6.362 6 C -0.176 4.176 7 C -0.068 4.068 8 N -0.262 5.262 9 C 0.068 3.932 10 C -0.543 4.543 11 H 0.082 0.918 12 C -0.147 4.147 13 N -0.540 5.540 14 Si 0.725 3.275 15 H -0.196 1.196 16 H -0.211 1.211 17 H -0.211 1.211 18 C -0.062 4.062 19 C -0.133 4.133 20 H 0.060 0.940 21 H 0.098 0.902 22 H 0.055 0.945 23 H 0.073 0.927 24 H 0.061 0.939 25 H 0.217 0.783 26 H 0.098 0.902 27 H 0.080 0.920 28 H 0.045 0.955 29 H 0.086 0.914 30 H 0.009 0.991 31 H 0.047 0.953 32 H 0.069 0.931 33 H 0.047 0.953 34 H 0.101 0.899 35 H 0.091 0.909 36 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -9.200 4.048 12.912 16.363 hybrid contribution 0.084 -0.092 0.120 0.173 sum -9.116 3.956 13.032 16.389 Atomic orbital electron populations 1.22716 0.82593 1.02163 0.99535 1.88044 1.18516 1.26882 1.94642 1.21648 0.95727 0.83359 0.91169 1.22840 0.97518 0.94813 0.87379 1.86604 1.82208 1.51551 1.15811 1.22143 0.99748 1.00499 0.95205 1.21857 0.90881 0.98281 0.95732 1.62090 1.06161 1.52998 1.04983 1.19694 0.95867 0.92944 0.84703 1.21220 0.91819 1.38275 1.02977 0.91788 1.24999 0.98584 0.95428 0.95712 1.69977 1.35559 1.41070 1.07362 0.86453 0.85396 0.77638 0.78008 1.19649 1.21135 1.21077 1.21879 1.01094 0.94166 0.89028 1.21560 0.90959 1.02045 0.98777 0.94030 0.90165 0.94490 0.92740 0.93859 0.78295 0.90221 0.91999 0.95458 0.91435 0.99143 0.95327 0.93052 0.95341 0.89902 0.90897 0.90507 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.34 10.15 101.05 1.03 1.36 16 2 O -0.36 -6.05 9.08 -45.48 -0.41 -6.46 16 3 C 0.12 1.85 0.49 -90.49 -0.04 1.80 16 4 C 0.05 0.64 5.65 37.16 0.21 0.85 16 5 O -0.56 -6.89 12.96 -45.48 -0.59 -7.48 16 6 C -0.14 -2.06 4.50 -26.65 -0.12 -2.18 16 7 C 0.06 1.16 5.33 -3.83 -0.02 1.14 16 8 N -0.54 -12.08 4.65 -236.11 -1.10 -13.18 16 9 C 0.19 5.21 4.72 -4.98 -0.02 5.19 16 10 C -0.50 -14.49 8.43 -34.44 -0.29 -14.79 16 11 H 0.06 1.82 7.12 -52.48 -0.37 1.44 16 12 C 0.05 1.55 5.46 -17.82 -0.10 1.46 16 13 N -0.90 -27.30 13.29 55.43 0.74 -26.56 16 14 Si 0.90 22.01 29.54 -169.99 -5.02 16.99 16 15 H -0.27 -6.53 7.11 56.52 0.40 -6.13 16 16 H -0.29 -6.93 7.11 56.52 0.40 -6.53 16 17 H -0.28 -6.91 7.11 56.52 0.40 -6.50 16 18 C 0.07 1.41 5.16 -3.83 -0.02 1.39 16 19 C -0.10 -1.66 4.94 -26.65 -0.13 -1.79 16 20 H 0.04 0.50 6.67 -51.93 -0.35 0.15 16 21 H 0.08 0.91 8.14 -51.93 -0.42 0.49 16 22 H 0.04 0.40 6.24 -51.93 -0.32 0.08 16 23 H 0.05 0.59 8.14 -51.93 -0.42 0.16 16 24 H 0.04 0.45 6.53 -51.93 -0.34 0.11 16 25 H 0.37 2.64 9.12 45.56 0.42 3.06 16 26 H 0.08 1.15 8.14 -51.93 -0.42 0.73 16 27 H 0.06 0.78 6.52 -51.93 -0.34 0.44 16 28 H 0.03 0.54 7.76 -51.92 -0.40 0.14 16 29 H 0.07 1.25 8.01 -51.93 -0.42 0.83 16 30 H -0.01 -0.27 8.12 -51.93 -0.42 -0.69 16 31 H 0.03 0.82 7.99 -51.93 -0.41 0.40 16 32 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 33 H 0.03 0.64 7.76 -51.93 -0.40 0.24 16 34 H 0.08 1.87 6.70 -51.93 -0.35 1.52 16 35 H 0.07 1.26 7.79 -51.93 -0.40 0.85 16 36 H 0.08 1.27 8.14 -51.93 -0.42 0.85 16 LS Contribution 282.88 15.07 4.26 4.26 Total: -1.00 -32.69 282.88 -6.58 -39.26 By element: Atomic # 1 Polarization: 3.68 SS G_CDS: -4.94 Total: -1.27 kcal Atomic # 6 Polarization: -6.06 SS G_CDS: 0.49 Total: -5.57 kcal Atomic # 7 Polarization: -39.38 SS G_CDS: -0.36 Total: -39.74 kcal Atomic # 8 Polarization: -12.93 SS G_CDS: -1.00 Total: -13.94 kcal Atomic # 14 Polarization: 22.01 SS G_CDS: -5.02 Total: 16.99 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -32.69 -6.58 -39.26 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000401742310.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.611 kcal (2) G-P(sol) polarization free energy of solvation -32.688 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.576 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.264 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.875 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds