Wall clock time and date at job start Sun Mar 29 2020 21:43:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35313 * 116.99469 * 2 1 4 4 N 1.32912 * 120.01464 * 359.97438 * 3 2 1 5 5 C 1.32349 * 120.09329 * 180.02562 * 4 3 2 6 6 Cl 1.73591 * 119.93766 * 180.02562 * 5 4 3 7 7 N 1.32276 * 120.11865 * 359.74771 * 5 4 3 8 8 C 1.33057 * 120.03194 * 0.50231 * 7 5 4 9 9 N 1.38138 * 120.04939 * 179.76646 * 8 7 5 10 10 C 1.37011 * 119.99667 * 359.73078 * 9 8 7 11 11 H 1.08002 * 120.00468 * 359.97438 * 10 9 8 12 12 C 1.38862 * 119.99785 * 179.71933 * 10 9 8 13 13 N 1.31514 * 120.00128 * 0.27524 * 12 10 9 14 14 Si 1.86803 * 119.99997 * 180.27697 * 12 10 9 15 15 H 1.48498 * 109.47174 * 90.00108 * 14 12 10 16 16 H 1.48501 * 109.47062 * 210.00059 * 14 12 10 17 17 H 1.48495 * 109.46833 * 329.99681 * 14 12 10 18 18 N 1.32647 * 120.01018 * 180.02562 * 3 2 1 19 19 H 1.09000 * 109.47104 * 299.98843 * 1 2 3 20 20 H 1.08989 * 109.47509 * 59.99944 * 1 2 3 21 21 H 1.09008 * 109.46776 * 179.97438 * 1 2 3 22 22 H 0.97000 * 119.99883 * 179.72462 * 9 8 7 23 23 H 0.96996 * 120.00393 * 179.97438 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0432 1.2057 0.0000 4 7 1.3195 2.3205 -0.0005 5 6 1.9186 3.5006 -0.0010 6 17 0.9695 4.9541 -0.0010 7 7 3.2393 3.5745 0.0040 8 6 3.9686 2.4616 -0.0005 9 7 5.3478 2.5384 -0.0001 10 6 5.9658 3.7612 -0.0007 11 1 5.3747 4.6651 -0.0018 12 6 7.3523 3.8385 0.0056 13 7 8.0722 2.7379 0.0066 14 14 8.1948 5.5057 0.0127 15 1 8.4120 5.9446 1.4146 16 1 9.5033 5.4019 -0.6818 17 1 7.3391 6.4957 -0.6892 18 7 3.3679 1.2755 -0.0005 19 1 -0.3633 0.5137 0.8901 20 1 -0.3634 0.5138 -0.8899 21 1 -0.3633 -1.0278 -0.0005 22 1 5.8788 1.7266 0.0006 23 1 9.0406 2.7918 0.0106 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001155531339.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:43:23 Heat of formation + Delta-G solvation = 31.349881 kcal Electronic energy + Delta-G solvation = -13461.910223 eV Core-core repulsion = 10758.632597 eV Total energy + Delta-G solvation = -2703.277626 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 230.031 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -40.56605 -38.15885 -36.52072 -35.67457 -32.83799 -32.21285 -30.69992 -27.32500 -25.35030 -23.88934 -22.35599 -18.97674 -18.54341 -17.15247 -16.12961 -15.96916 -15.16281 -14.47811 -14.22894 -14.00129 -13.74913 -13.16157 -12.27614 -11.92075 -11.75079 -11.74740 -11.22311 -11.00920 -10.76127 -10.55917 -10.37235 -9.50409 -9.13285 -8.78142 -8.57081 -8.09375 -6.92975 -4.15872 1.81711 1.93265 2.07193 2.99098 3.04930 3.08094 3.15242 3.82180 4.33523 4.47025 5.01854 5.11246 5.41174 5.52901 5.53383 5.79553 6.38683 7.09456 7.18861 7.35051 7.68152 7.86310 8.35780 8.79264 8.88816 9.51685 10.20909 Molecular weight = 230.03amu Principal moments of inertia in cm(-1) A = 0.031205 B = 0.007978 C = 0.006375 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 897.086320 B = 3509.023415 C = 4390.960264 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 O -0.293 6.293 3 C 0.574 3.426 4 N -0.684 5.684 5 C 0.465 3.535 6 Cl 0.000 7.000 7 N -0.598 5.598 8 C 0.518 3.482 9 N -0.457 5.457 10 C -0.286 4.286 11 H 0.124 0.876 12 C 0.028 3.972 13 N -0.867 5.867 14 Si 0.948 3.052 15 H -0.271 1.271 16 H -0.278 1.278 17 H -0.261 1.261 18 N -0.628 5.628 19 H 0.060 0.940 20 H 0.060 0.940 21 H 0.095 0.905 22 H 0.418 0.582 23 H 0.284 0.716 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.676 0.494 -0.019 8.690 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 O -0.193 6.193 3 C 0.261 3.739 4 N -0.438 5.438 5 C 0.159 3.841 6 Cl 0.027 6.973 7 N -0.337 5.337 8 C 0.162 3.838 9 N -0.067 5.067 10 C -0.419 4.419 11 H 0.142 0.858 12 C -0.180 4.180 13 N -0.502 5.502 14 Si 0.773 3.227 15 H -0.196 1.196 16 H -0.203 1.203 17 H -0.185 1.185 18 N -0.377 5.377 19 H 0.079 0.921 20 H 0.079 0.921 21 H 0.113 0.887 22 H 0.256 0.744 23 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -8.084 0.360 -0.017 8.092 hybrid contribution 0.346 0.534 0.016 0.637 sum -7.739 0.895 -0.002 7.790 Atomic orbital electron populations 1.22853 0.76498 1.02513 1.02810 1.86005 1.22764 1.23073 1.87470 1.19934 0.85174 0.83645 0.85153 1.67846 1.41252 0.97599 1.37123 1.21999 0.86080 0.86723 0.89315 1.98369 1.70219 1.32499 1.96177 1.67760 1.04871 1.32386 1.28717 1.18323 0.87085 0.81800 0.96624 1.40635 0.98970 1.10762 1.56339 1.20225 0.89927 0.85237 1.46504 0.85793 1.25640 0.96287 1.00440 0.95667 1.69676 1.08071 1.28250 1.44157 0.85560 0.78355 0.79796 0.79037 1.19645 1.20331 1.18547 1.67428 1.08299 1.28070 1.33880 0.92129 0.92130 0.88654 0.74361 0.90537 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.65 10.39 101.05 1.05 1.70 14 2 O -0.29 -5.50 10.55 -17.63 -0.19 -5.68 14 3 C 0.57 12.57 8.55 -90.45 -0.77 11.79 14 4 N -0.68 -14.37 9.37 -13.16 -0.12 -14.50 14 5 C 0.46 10.03 8.25 -91.26 -0.75 9.27 14 6 Cl 0.00 0.00 29.30 -51.86 -1.52 -1.52 14 7 N -0.60 -14.37 9.23 -12.37 -0.11 -14.48 14 8 C 0.52 12.92 8.43 -321.87 -2.71 10.21 14 9 N -0.46 -11.55 5.42 -12.63 -0.07 -11.61 14 10 C -0.29 -7.23 9.71 -15.01 -0.15 -7.37 14 11 H 0.12 3.15 7.08 -52.49 -0.37 2.77 14 12 C 0.03 0.67 5.50 -17.46 -0.10 0.58 14 13 N -0.87 -21.68 13.05 55.49 0.72 -20.95 14 14 Si 0.95 18.79 29.55 -169.99 -5.02 13.76 14 15 H -0.27 -5.32 7.11 56.52 0.40 -4.92 14 16 H -0.28 -5.42 7.11 56.52 0.40 -5.02 14 17 H -0.26 -5.13 7.11 56.52 0.40 -4.73 14 18 N -0.63 -15.18 10.56 -15.45 -0.16 -15.34 14 19 H 0.06 0.78 8.11 -51.93 -0.42 0.36 14 20 H 0.06 0.78 8.11 -51.94 -0.42 0.36 14 21 H 0.10 0.92 8.14 -51.92 -0.42 0.49 14 22 H 0.42 10.56 8.02 -40.82 -0.33 10.23 14 23 H 0.28 6.61 8.31 -40.82 -0.34 6.27 14 LS Contribution 236.96 15.07 3.57 3.57 Total: -1.00 -27.32 236.96 -7.43 -34.75 By element: Atomic # 1 Polarization: 6.93 SS G_CDS: -1.10 Total: 5.83 kcal Atomic # 6 Polarization: 29.61 SS G_CDS: -3.43 Total: 26.18 kcal Atomic # 7 Polarization: -77.15 SS G_CDS: 0.26 Total: -76.89 kcal Atomic # 8 Polarization: -5.50 SS G_CDS: -0.19 Total: -5.68 kcal Atomic # 14 Polarization: 18.79 SS G_CDS: -5.02 Total: 13.76 kcal Atomic # 17 Polarization: 0.00 SS G_CDS: -1.52 Total: -1.52 kcal Total LS contribution 3.57 Total: 3.57 kcal Total: -27.32 -7.43 -34.75 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001155531339.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.100 kcal (2) G-P(sol) polarization free energy of solvation -27.316 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.784 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.750 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.350 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.16 seconds