Wall clock time and date at job start Sun Mar 29 2020 21:40:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53008 * 109.47054 * 2 1 4 4 F 1.39898 * 109.47254 * 240.00534 * 2 1 3 5 5 C 1.50705 * 109.47466 * 120.00200 * 2 1 3 6 6 O 1.21279 * 119.99527 * 355.00405 * 5 2 1 7 7 N 1.34770 * 119.99724 * 174.99927 * 5 2 1 8 8 C 1.46501 * 119.99678 * 180.02562 * 7 5 2 9 9 C 1.53495 * 114.20743 * 205.00169 * 8 7 5 10 10 N 1.47066 * 87.98658 * 220.14538 * 9 8 7 11 11 C 1.36937 * 136.06113 * 206.85859 * 10 9 8 12 12 H 1.07995 * 120.00001 * 0.02562 * 11 10 9 13 13 C 1.38817 * 120.00320 * 179.97438 * 11 10 9 14 14 N 1.31620 * 119.99557 * 0.02562 * 13 11 10 15 15 Si 1.86797 * 119.99975 * 180.02562 * 13 11 10 16 16 H 1.48497 * 109.47441 * 0.02562 * 15 13 11 17 17 H 1.48500 * 109.47001 * 120.00359 * 15 13 11 18 18 H 1.48499 * 109.47209 * 240.00202 * 15 13 11 19 19 C 1.47067 * 87.88528 * 27.11900 * 10 9 8 20 20 H 1.09004 * 109.46830 * 299.99684 * 1 2 3 21 21 H 1.09000 * 109.47433 * 59.99206 * 1 2 3 22 22 H 1.09001 * 109.46830 * 179.97438 * 1 2 3 23 23 H 1.08997 * 109.46863 * 179.97438 * 3 2 1 24 24 H 1.08994 * 109.47287 * 300.00509 * 3 2 1 25 25 H 1.09000 * 109.46618 * 60.00718 * 3 2 1 26 26 H 0.96992 * 120.00585 * 0.02562 * 7 5 2 27 27 H 1.09006 * 113.28128 * 338.06706 * 8 7 5 28 28 H 1.09005 * 113.46950 * 105.37104 * 9 8 7 29 29 H 1.08994 * 113.52293 * 334.93589 * 9 8 7 30 30 H 0.96999 * 119.99537 * 179.97438 * 14 13 11 31 31 H 1.09007 * 113.46858 * 87.65629 * 19 10 9 32 32 H 1.08993 * 113.47208 * 218.09965 * 19 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 9 1.9963 -0.6594 -1.1423 5 6 2.0324 -0.7105 1.2304 6 8 1.2480 -1.0915 2.0733 7 7 3.3533 -0.9224 1.3940 8 6 3.8416 -1.6135 2.5899 9 6 5.2917 -1.2763 2.9636 10 7 5.4820 -2.6966 3.2944 11 6 6.2925 -3.4136 4.1336 12 1 7.0119 -2.9028 4.7564 13 6 6.1888 -4.7969 4.1846 14 7 5.3117 -5.4194 3.4259 15 14 7.2940 -5.7748 5.3299 16 1 8.1855 -4.8461 6.0700 17 1 6.4588 -6.5334 6.2954 18 1 8.1158 -6.7224 4.5350 19 6 4.4233 -3.0086 2.3225 20 1 -0.3633 0.5138 0.8901 21 1 -0.3634 0.5139 -0.8899 22 1 -0.3633 -1.0277 -0.0005 23 1 3.1300 1.4425 0.0005 24 1 1.6766 1.9564 -0.8899 25 1 1.6767 1.9563 0.8901 26 1 3.9805 -0.6174 0.7201 27 1 3.1436 -1.5731 3.4261 28 1 5.3751 -0.6149 3.8260 29 1 5.8928 -0.9434 2.1176 30 1 5.2394 -6.3861 3.4613 31 1 4.7923 -3.1373 1.3050 32 1 3.7683 -3.8200 2.6397 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001030049192.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:40:01 Heat of formation + Delta-G solvation = -32.059548 kcal Electronic energy + Delta-G solvation = -16272.340127 eV Core-core repulsion = 13377.349925 eV Total energy + Delta-G solvation = -2894.990202 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 230.117 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -47.90884 -39.66303 -37.81773 -33.78849 -33.50873 -31.84795 -27.81700 -27.40958 -24.67194 -24.42750 -22.42109 -20.02937 -19.59734 -17.66861 -16.81805 -16.18917 -15.94982 -15.08296 -14.93821 -14.56416 -14.01893 -13.84571 -13.21816 -12.73568 -12.62999 -12.54415 -12.22527 -12.19633 -11.88067 -11.55666 -11.45911 -11.10531 -10.94098 -10.83695 -10.43327 -10.07990 -9.55163 -9.48075 -8.86273 -8.47554 -6.96394 -5.80824 -3.15520 2.62008 3.20671 3.38200 3.42793 3.45790 4.28899 4.33296 4.43602 4.64465 4.72373 5.18964 5.28524 5.36944 5.43091 5.50880 5.53049 5.73453 5.84924 5.96075 6.00212 6.17231 6.34519 6.47883 6.66436 7.17671 7.28268 7.50964 7.72339 7.92377 8.32614 8.98426 9.65007 10.55498 11.36415 Molecular weight = 230.12amu Principal moments of inertia in cm(-1) A = 0.059359 B = 0.005486 C = 0.005363 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 471.595668 B = 5102.674781 C = 5219.435925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.100 3.900 3 C -0.171 4.171 4 F -0.196 7.196 5 C 0.497 3.503 6 O -0.527 6.527 7 N -0.700 5.700 8 C 0.084 3.916 9 C 0.112 3.888 10 N -0.604 5.604 11 C -0.222 4.222 12 H 0.085 0.915 13 C -0.006 4.006 14 N -0.917 5.917 15 Si 0.916 3.084 16 H -0.278 1.278 17 H -0.289 1.289 18 H -0.289 1.289 19 C 0.145 3.855 20 H 0.082 0.918 21 H 0.071 0.929 22 H 0.074 0.926 23 H 0.073 0.927 24 H 0.078 0.922 25 H 0.081 0.919 26 H 0.399 0.601 27 H 0.117 0.883 28 H 0.046 0.954 29 H 0.035 0.965 30 H 0.255 0.745 31 H 0.028 0.972 32 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.369 13.247 -7.718 16.602 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.215 4.215 2 C 0.078 3.922 3 C -0.229 4.229 4 F -0.177 7.177 5 C 0.280 3.720 6 O -0.403 6.403 7 N -0.350 5.350 8 C -0.021 4.021 9 C -0.015 4.015 10 N -0.330 5.330 11 C -0.349 4.349 12 H 0.102 0.898 13 C -0.203 4.203 14 N -0.563 5.563 15 Si 0.746 3.254 16 H -0.203 1.203 17 H -0.215 1.215 18 H -0.216 1.216 19 C 0.018 3.982 20 H 0.101 0.899 21 H 0.090 0.910 22 H 0.093 0.907 23 H 0.092 0.908 24 H 0.097 0.903 25 H 0.100 0.900 26 H 0.234 0.766 27 H 0.135 0.865 28 H 0.065 0.935 29 H 0.052 0.948 30 H 0.065 0.935 31 H 0.046 0.954 32 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -6.759 12.628 -6.933 15.913 hybrid contribution 1.069 -0.549 -0.026 1.202 sum -5.690 12.079 -6.960 15.057 Atomic orbital electron populations 1.22150 0.91139 1.04619 1.03550 1.21250 0.96828 0.92923 0.81165 1.22383 1.02827 0.93263 1.04414 1.92916 1.90262 1.82757 1.51725 1.20718 0.83351 0.79996 0.87931 1.90724 1.55212 1.50297 1.44054 1.46017 1.06773 1.58187 1.24044 1.23729 0.95388 0.95759 0.87269 1.22705 0.91714 0.89566 0.97558 1.45277 1.42898 1.00642 1.44135 1.18953 1.13037 0.88463 1.14411 0.89763 1.24855 0.99462 0.96213 0.99796 1.69853 1.36858 1.08098 1.41510 0.85984 0.79573 0.79989 0.79822 1.20332 1.21539 1.21634 1.22517 0.89627 0.93643 0.92421 0.89889 0.90983 0.90652 0.90784 0.90277 0.90008 0.76636 0.86478 0.93538 0.94782 0.93496 0.95425 0.90586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.68 8.23 37.16 0.31 -1.38 16 2 C 0.10 1.21 1.53 -91.77 -0.14 1.07 16 3 C -0.17 -1.48 8.88 37.16 0.33 -1.15 16 4 F -0.20 -2.62 16.79 2.25 0.04 -2.59 16 5 C 0.50 7.92 6.82 -10.99 -0.07 7.85 16 6 O -0.53 -10.27 15.58 5.56 0.09 -10.19 16 7 N -0.70 -11.09 5.36 -53.62 -0.29 -11.37 16 8 C 0.08 1.64 4.60 -67.81 -0.31 1.33 16 9 C 0.11 2.25 8.45 -8.51 -0.07 2.18 16 10 N -0.60 -15.69 3.78 -184.79 -0.70 -16.39 16 11 C -0.22 -6.26 10.75 -15.06 -0.16 -6.43 16 12 H 0.08 2.27 7.83 -52.49 -0.41 1.86 16 13 C -0.01 -0.18 5.50 -17.43 -0.10 -0.27 16 14 N -0.92 -27.77 11.51 55.49 0.64 -27.13 16 15 Si 0.92 22.22 29.55 -169.99 -5.02 17.20 16 16 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 17 H -0.29 -7.03 7.11 56.52 0.40 -6.63 16 18 H -0.29 -7.04 7.11 56.52 0.40 -6.64 16 19 C 0.14 3.52 7.22 -8.51 -0.06 3.46 16 20 H 0.08 0.85 8.05 -51.93 -0.42 0.44 16 21 H 0.07 0.59 8.14 -51.93 -0.42 0.17 16 22 H 0.07 0.91 8.14 -51.93 -0.42 0.48 16 23 H 0.07 0.60 7.92 -51.93 -0.41 0.19 16 24 H 0.08 0.55 8.14 -51.93 -0.42 0.12 16 25 H 0.08 0.65 8.14 -51.93 -0.42 0.23 16 26 H 0.40 5.29 8.54 -40.82 -0.35 4.94 16 27 H 0.12 2.49 7.45 -51.93 -0.39 2.11 16 28 H 0.05 0.88 8.14 -51.93 -0.42 0.46 16 29 H 0.03 0.63 8.14 -51.93 -0.42 0.21 16 30 H 0.25 7.44 8.31 -40.82 -0.34 7.10 16 31 H 0.03 0.68 8.14 -51.93 -0.42 0.25 16 32 H 0.08 2.11 7.12 -51.93 -0.37 1.74 16 LS Contribution 278.07 15.07 4.19 4.19 Total: -1.00 -32.87 278.07 -5.78 -38.65 By element: Atomic # 1 Polarization: 5.40 SS G_CDS: -4.44 Total: 0.96 kcal Atomic # 6 Polarization: 6.95 SS G_CDS: -0.28 Total: 6.67 kcal Atomic # 7 Polarization: -54.55 SS G_CDS: -0.35 Total: -54.89 kcal Atomic # 8 Polarization: -10.27 SS G_CDS: 0.09 Total: -10.19 kcal Atomic # 9 Polarization: -2.62 SS G_CDS: 0.04 Total: -2.59 kcal Atomic # 14 Polarization: 22.22 SS G_CDS: -5.02 Total: 17.20 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -32.87 -5.78 -38.65 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001030049192.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.592 kcal (2) G-P(sol) polarization free energy of solvation -32.873 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.282 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.778 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.651 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.060 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds