Wall clock time and date at job start Sun Mar 29 2020 21:53:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13594 * 1 3 3 C 1.47204 * 179.97438 * 2 1 4 4 N 1.46499 * 109.46864 * 237.88693 * 3 2 1 5 5 C 1.36823 * 119.99788 * 263.85106 * 4 3 2 6 6 H 1.07994 * 119.99592 * 200.37523 * 5 4 3 7 7 C 1.39070 * 119.99790 * 20.37914 * 5 4 3 8 8 N 1.31345 * 120.00512 * 21.43163 * 7 5 4 9 9 Si 1.86804 * 119.99470 * 201.43611 * 7 5 4 10 10 H 1.48505 * 109.47404 * 90.00049 * 9 7 5 11 11 H 1.48502 * 109.47075 * 209.99726 * 9 7 5 12 12 H 1.48499 * 109.47399 * 329.99768 * 9 7 5 13 13 C 1.34768 * 120.00074 * 83.85741 * 4 3 2 14 14 O 1.21661 * 120.00468 * 179.97438 * 13 4 3 15 15 C 1.46954 * 120.00120 * 359.97438 * 13 4 3 16 16 C 1.33128 * 120.00280 * 180.02562 * 15 13 4 17 17 C 1.50698 * 120.00198 * 179.72381 * 16 15 13 18 18 C 1.53774 * 113.61645 * 219.13293 * 17 16 15 19 19 C 1.53956 * 87.02109 * 220.05000 * 18 17 16 20 20 C 1.53777 * 87.11300 * 25.36006 * 19 18 17 21 21 H 1.08994 * 109.46685 * 117.88586 * 3 2 1 22 22 H 1.09000 * 109.47136 * 357.88899 * 3 2 1 23 23 H 0.97004 * 120.00051 * 179.97438 * 8 7 5 24 24 H 1.08003 * 119.99658 * 359.72298 * 15 13 4 25 25 H 1.07996 * 119.99605 * 359.71597 * 16 15 13 26 26 H 1.09003 * 112.85009 * 350.33247 * 17 16 15 27 27 H 1.09005 * 113.60960 * 334.56676 * 18 17 16 28 28 H 1.08999 * 113.61677 * 105.46682 * 18 17 16 29 29 H 1.09000 * 113.52994 * 270.81056 * 19 18 17 30 30 H 1.08995 * 113.74200 * 139.94587 * 19 18 17 31 31 H 1.08996 * 113.61660 * 220.09288 * 20 19 18 32 32 H 1.08999 * 113.61247 * 89.18561 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0959 0.7351 1.1699 5 6 3.4430 2.0535 1.0541 6 1 4.0940 2.5068 1.7868 7 6 2.9573 2.8097 -0.0072 8 7 1.8735 2.4283 -0.6437 9 14 3.8465 4.3680 -0.5276 10 1 4.8663 4.0365 -1.5549 11 1 2.8679 5.3306 -1.0942 12 1 4.5120 4.9758 0.6526 13 6 3.2030 0.1122 2.3601 14 8 3.6087 0.7219 3.3316 15 6 2.8299 -1.3037 2.4847 16 6 2.9352 -1.9190 3.6605 17 6 2.5466 -3.3693 3.7896 18 6 1.8182 -3.6973 5.1035 19 6 2.6368 -5.0007 5.1383 20 6 3.6888 -4.2713 4.2864 21 1 2.9710 0.4815 -0.9083 22 1 2.9718 -1.0261 0.0379 23 1 1.5346 2.9560 -1.3837 24 1 2.4655 -1.8439 1.6233 25 1 3.2992 -1.3788 4.5219 26 1 2.0417 -3.7528 2.9029 27 1 2.0548 -3.0113 5.9169 28 1 0.7469 -3.8565 4.9809 29 1 2.1554 -5.8308 4.6213 30 1 2.9910 -5.2701 6.1333 31 1 4.1255 -4.8932 3.5050 32 1 4.4377 -3.7425 4.8759 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000492050743.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:53:39 Heat of formation + Delta-G solvation = 34.519444 kcal Electronic energy + Delta-G solvation = -15837.843088 eV Core-core repulsion = 13186.053141 eV Total energy + Delta-G solvation = -2651.789947 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 234.111 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -39.06890 -38.44267 -35.76976 -34.34728 -32.42396 -31.70223 -27.51062 -26.25307 -25.55817 -24.46186 -21.26020 -19.40719 -18.44468 -17.85934 -16.65981 -16.26709 -15.45754 -14.92336 -14.35874 -14.22063 -13.43912 -13.09834 -12.97964 -12.61163 -12.43005 -12.40482 -11.99631 -11.63833 -11.39403 -11.21220 -11.16035 -10.58547 -10.54964 -10.50001 -10.42156 -10.31732 -10.30051 -9.28588 -8.71910 -8.58551 -8.03359 -6.53699 -3.99891 2.04280 3.13429 3.21288 3.25831 3.67814 3.97681 4.12053 4.24646 4.65231 4.70001 4.74204 4.89119 4.97819 5.04413 5.25187 5.46211 5.53620 5.69652 5.76942 5.78841 5.87486 5.97746 5.99876 6.14312 6.16740 6.44783 6.50100 6.93572 7.01076 7.44231 7.96031 8.29663 8.76599 9.00756 9.18781 9.78720 10.52224 Molecular weight = 234.11amu Principal moments of inertia in cm(-1) A = 0.039251 B = 0.006052 C = 0.005496 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 713.181341 B = 4625.625867 C = 5093.434953 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.471 5.471 2 C 0.245 3.755 3 C 0.221 3.779 4 N -0.434 5.434 5 C -0.312 4.312 6 H 0.109 0.891 7 C 0.032 3.968 8 N -0.871 5.871 9 Si 0.929 3.071 10 H -0.275 1.275 11 H -0.285 1.285 12 H -0.268 1.268 13 C 0.478 3.522 14 O -0.581 6.581 15 C -0.186 4.186 16 C -0.096 4.096 17 C -0.086 4.086 18 C -0.133 4.133 19 C -0.144 4.144 20 C -0.130 4.130 21 H 0.123 0.877 22 H 0.087 0.913 23 H 0.274 0.726 24 H 0.113 0.887 25 H 0.122 0.878 26 H 0.093 0.907 27 H 0.083 0.917 28 H 0.066 0.934 29 H 0.078 0.922 30 H 0.065 0.935 31 H 0.067 0.933 32 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.620 -11.712 2.881 12.592 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.151 5.151 2 C -0.073 4.073 3 C 0.094 3.906 4 N -0.153 5.153 5 C -0.439 4.439 6 H 0.127 0.873 7 C -0.173 4.173 8 N -0.509 5.509 9 Si 0.755 3.245 10 H -0.201 1.201 11 H -0.211 1.211 12 H -0.192 1.192 13 C 0.270 3.730 14 O -0.466 6.466 15 C -0.207 4.207 16 C -0.116 4.116 17 C -0.104 4.104 18 C -0.171 4.171 19 C -0.181 4.181 20 C -0.167 4.167 21 H 0.141 0.859 22 H 0.105 0.895 23 H 0.085 0.915 24 H 0.131 0.869 25 H 0.140 0.860 26 H 0.111 0.889 27 H 0.102 0.898 28 H 0.085 0.915 29 H 0.096 0.904 30 H 0.084 0.916 31 H 0.086 0.914 32 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 2.037 -11.289 3.169 11.901 hybrid contribution 0.539 0.958 -0.586 1.246 sum 2.576 -10.331 2.583 10.956 Atomic orbital electron populations 1.80876 1.13594 1.11780 1.08867 1.29266 0.95347 0.90280 0.92403 1.18729 0.81680 0.96614 0.93592 1.43530 1.55595 1.10547 1.05609 1.19742 1.27528 0.85146 1.11471 0.87319 1.25355 0.94811 0.99604 0.97516 1.69828 1.17816 1.40767 1.22513 0.85876 0.78995 0.80523 0.79108 1.20057 1.21060 1.19235 1.18274 0.84423 0.87343 0.82975 1.90624 1.51162 1.67944 1.36832 1.22900 1.03813 0.95435 0.98555 1.23376 0.96171 0.94102 0.97967 1.21691 0.97668 0.92692 0.98353 1.22951 0.99194 0.97281 0.97632 1.22875 0.97960 0.97017 1.00250 1.22891 0.96489 0.97810 0.99530 0.85906 0.89505 0.91503 0.86912 0.86019 0.88917 0.89815 0.91482 0.90378 0.91590 0.91420 0.89798 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -11.40 18.54 42.15 0.78 -10.62 16 2 C 0.25 5.52 13.17 -20.76 -0.27 5.24 16 3 C 0.22 4.45 4.79 -6.83 -0.03 4.42 16 4 N -0.43 -10.42 2.59 -119.34 -0.31 -10.72 16 5 C -0.31 -8.14 9.26 -15.02 -0.14 -8.28 16 6 H 0.11 3.00 7.43 -52.49 -0.39 2.61 16 7 C 0.03 0.79 4.84 -17.45 -0.08 0.70 16 8 N -0.87 -22.22 9.59 55.50 0.53 -21.68 16 9 Si 0.93 19.64 29.60 -169.99 -5.03 14.61 16 10 H -0.27 -5.60 7.11 56.52 0.40 -5.20 16 11 H -0.28 -6.10 7.11 56.52 0.40 -5.70 16 12 H -0.27 -5.75 7.11 56.52 0.40 -5.35 16 13 C 0.48 11.38 7.51 -12.73 -0.10 11.28 16 14 O -0.58 -15.84 15.89 5.22 0.08 -15.76 16 15 C -0.19 -3.47 8.70 -37.83 -0.33 -3.80 16 16 C -0.10 -1.57 8.79 -36.09 -0.32 -1.89 16 17 C -0.09 -1.08 4.01 -90.96 -0.36 -1.45 16 18 C -0.13 -1.50 7.64 -25.83 -0.20 -1.70 16 19 C -0.14 -1.36 8.09 -25.83 -0.21 -1.57 16 20 C -0.13 -1.38 7.63 -25.92 -0.20 -1.58 16 21 H 0.12 2.48 6.63 -51.93 -0.34 2.14 16 22 H 0.09 1.34 6.47 -51.93 -0.34 1.01 16 23 H 0.27 6.75 8.31 -40.82 -0.34 6.41 16 24 H 0.11 1.83 6.16 -52.48 -0.32 1.50 16 25 H 0.12 2.17 7.49 -52.49 -0.39 1.78 16 26 H 0.09 1.12 8.03 -51.93 -0.42 0.70 16 27 H 0.08 0.96 8.09 -51.93 -0.42 0.54 16 28 H 0.07 0.73 8.14 -51.93 -0.42 0.30 16 29 H 0.08 0.67 8.14 -51.93 -0.42 0.25 16 30 H 0.07 0.57 8.14 -51.93 -0.42 0.14 16 31 H 0.07 0.66 8.14 -51.93 -0.42 0.23 16 32 H 0.08 0.91 8.09 -51.93 -0.42 0.49 16 LS Contribution 281.22 15.07 4.24 4.24 Total: -1.00 -30.88 281.22 -5.82 -36.70 By element: Atomic # 1 Polarization: 5.73 SS G_CDS: -3.87 Total: 1.86 kcal Atomic # 6 Polarization: 3.62 SS G_CDS: -2.24 Total: 1.38 kcal Atomic # 7 Polarization: -44.03 SS G_CDS: 1.00 Total: -43.03 kcal Atomic # 8 Polarization: -15.84 SS G_CDS: 0.08 Total: -15.76 kcal Atomic # 14 Polarization: 19.64 SS G_CDS: -5.03 Total: 14.61 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -30.88 -5.82 -36.70 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000492050743.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.220 kcal (2) G-P(sol) polarization free energy of solvation -30.884 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.336 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.817 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.700 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.519 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds