Wall clock time and date at job start Sun Mar 29 2020 22:19:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.46503 * 119.99576 * 2 1 4 4 C 1.39676 * 120.00333 * 180.02562 * 2 1 3 5 5 C 1.39517 * 120.41397 * 359.97438 * 4 2 1 6 6 C 1.38204 * 118.43706 * 180.02562 * 5 4 2 7 7 C 1.39264 * 119.18196 * 0.02562 * 6 5 4 8 8 N 1.39072 * 119.61754 * 180.02562 * 7 6 5 9 9 C 1.34780 * 119.99830 * 174.91611 * 8 7 6 10 10 O 1.21767 * 120.00069 * 5.09187 * 9 8 7 11 11 C 1.41758 * 120.00114 * 185.09120 * 9 8 7 12 12 H 1.08008 * 119.99730 * 0.02562 * 11 9 8 13 13 C 1.40134 * 120.00138 * 180.02562 * 11 9 8 14 14 N 1.30629 * 119.99729 * 359.97438 * 13 11 9 15 15 Si 1.86799 * 120.00043 * 180.02562 * 13 11 9 16 16 H 1.48497 * 109.46931 * 0.02562 * 15 13 11 17 17 H 1.48506 * 109.47100 * 119.99978 * 15 13 11 18 18 H 1.48498 * 109.46994 * 240.00007 * 15 13 11 19 19 N 1.32436 * 120.76110 * 0.02562 * 7 6 5 20 20 C 1.31827 * 121.70542 * 359.69428 * 19 7 6 21 21 H 1.08999 * 109.47310 * 90.00334 * 1 2 3 22 22 H 1.09003 * 109.47208 * 329.99470 * 1 2 3 23 23 H 1.09008 * 109.47048 * 209.99857 * 1 2 3 24 24 H 1.09006 * 109.46746 * 90.00633 * 3 2 1 25 25 H 1.08999 * 109.46932 * 209.99582 * 3 2 1 26 26 H 1.08998 * 109.47276 * 330.00196 * 3 2 1 27 27 H 1.08001 * 120.78036 * 359.97438 * 5 4 2 28 28 H 1.08003 * 120.40394 * 179.97438 * 6 5 4 29 29 H 0.96998 * 120.00373 * 354.91770 * 8 7 6 30 30 H 0.97004 * 119.99811 * 179.97438 * 14 13 11 31 31 H 1.08007 * 119.62699 * 180.31175 * 20 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 6 2.1634 -1.2096 -0.0005 5 6 1.4747 -2.4229 -0.0005 6 6 2.2066 -3.5952 -0.0005 7 6 3.5976 -3.5272 0.0000 8 7 4.3431 -4.7012 -0.0005 9 6 5.6859 -4.6467 -0.1035 10 8 6.2534 -3.5694 -0.1025 11 6 6.4375 -5.8437 -0.2127 12 1 5.9341 -6.7992 -0.2139 13 6 7.8337 -5.7871 -0.3192 14 7 8.4424 -4.6313 -0.3182 15 14 8.8240 -7.3643 -0.4639 16 1 7.9043 -8.5299 -0.4427 17 1 9.5834 -7.3566 -1.7402 18 1 9.7717 -7.4600 0.6753 19 7 4.2186 -2.3574 0.0010 20 6 3.5529 -1.2196 -0.0044 21 1 -0.3634 -0.0001 -1.0276 22 1 -0.3634 0.8900 0.5139 23 1 -0.3633 -0.8901 0.5138 24 1 2.3791 1.5834 1.0277 25 1 3.1498 1.1385 -0.5138 26 1 1.6083 2.0284 -0.5138 27 1 0.3949 -2.4455 0.0003 28 1 1.7060 -4.5522 -0.0001 29 1 3.8968 -5.5592 0.0731 30 1 9.4089 -4.5921 -0.3916 31 1 4.0936 -0.2847 -0.0085 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000274620574.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:19:35 Heat of formation + Delta-G solvation = 29.008665 kcal Electronic energy + Delta-G solvation = -15962.993539 eV Core-core repulsion = 13245.538716 eV Total energy + Delta-G solvation = -2717.454823 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 235.106 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.79424 -37.58547 -35.97793 -33.17053 -32.23853 -31.56111 -28.97304 -28.17409 -26.53327 -24.23182 -22.86936 -21.17216 -19.74961 -17.61764 -17.02031 -16.06468 -15.77869 -15.18297 -14.96255 -14.07114 -14.02303 -13.65956 -13.53566 -12.86243 -12.63388 -12.48981 -12.26693 -12.06777 -11.89334 -11.41554 -11.19156 -11.08379 -10.50546 -10.20740 -10.08181 -9.16159 -8.87452 -8.65360 -8.20670 -7.30759 -6.39297 -6.20151 -4.74308 1.88987 2.18261 3.11570 3.19385 3.24032 3.36157 4.06361 4.45226 4.55523 4.77781 5.06297 5.10178 5.25769 5.31533 5.40441 5.61548 5.66855 5.69276 5.78766 5.85207 5.95887 6.19258 6.45533 6.53563 6.90160 7.35918 7.44828 7.70786 7.81651 8.10824 8.30708 8.90450 8.94114 9.55920 10.55277 10.82753 Molecular weight = 235.11amu Principal moments of inertia in cm(-1) A = 0.064011 B = 0.005289 C = 0.004907 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 437.320868 B = 5292.724005 C = 5704.920051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.101 3.899 2 N -0.642 5.642 3 C 0.099 3.901 4 C 0.092 3.908 5 C -0.122 4.122 6 C -0.197 4.197 7 C 0.346 3.654 8 N -0.679 5.679 9 C 0.534 3.466 10 O -0.521 6.521 11 C -0.543 4.543 12 H 0.068 0.932 13 C 0.088 3.912 14 N -0.751 5.751 15 Si 0.911 3.089 16 H -0.263 1.263 17 H -0.275 1.275 18 H -0.275 1.275 19 N -0.433 5.433 20 C 0.070 3.930 21 H 0.040 0.960 22 H 0.059 0.941 23 H 0.063 0.937 24 H 0.043 0.957 25 H 0.068 0.932 26 H 0.060 0.940 27 H 0.124 0.876 28 H 0.125 0.875 29 H 0.395 0.605 30 H 0.270 0.730 31 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.625 5.421 0.460 14.671 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.042 4.042 2 N -0.359 5.359 3 C -0.044 4.044 4 C -0.010 4.010 5 C -0.152 4.152 6 C -0.223 4.223 7 C 0.112 3.888 8 N -0.324 5.324 9 C 0.340 3.660 10 O -0.398 6.398 11 C -0.579 4.579 12 H 0.086 0.914 13 C -0.134 4.134 14 N -0.379 5.379 15 Si 0.735 3.265 16 H -0.187 1.187 17 H -0.201 1.201 18 H -0.200 1.200 19 N -0.147 5.147 20 C -0.094 4.094 21 H 0.058 0.942 22 H 0.078 0.922 23 H 0.082 0.918 24 H 0.061 0.939 25 H 0.087 0.913 26 H 0.078 0.922 27 H 0.142 0.858 28 H 0.143 0.857 29 H 0.228 0.772 30 H 0.081 0.919 31 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -12.042 6.349 0.435 13.620 hybrid contribution -0.801 -1.217 -0.047 1.457 sum -12.843 5.132 0.388 13.836 Atomic orbital electron populations 1.21475 0.80437 1.01932 1.00402 1.45907 1.04138 1.02740 1.83158 1.21526 0.97215 0.84987 1.00718 1.18757 0.92741 0.86077 1.03375 1.20683 0.99075 0.90559 1.04854 1.21265 0.92952 0.98600 1.09461 1.18730 0.87474 0.87740 0.94900 1.44449 1.09182 1.04454 1.74305 1.17176 0.78477 0.91397 0.78959 1.90750 1.67127 1.30521 1.51435 1.20067 0.91873 0.92911 1.53012 0.91394 1.25725 0.98079 0.96951 0.92660 1.70039 1.09587 1.25122 1.33129 0.86268 0.79749 0.82146 0.78322 1.18669 1.20060 1.20048 1.67912 1.37860 0.96326 1.12563 1.22411 0.88582 0.96751 1.01649 0.94169 0.92220 0.91837 0.93901 0.91347 0.92169 0.85804 0.85711 0.77195 0.91884 0.83786 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 1.00 10.21 59.85 0.61 1.61 16 2 N -0.64 -8.51 3.41 -187.34 -0.64 -9.15 16 3 C 0.10 1.08 10.20 59.85 0.61 1.69 16 4 C 0.09 1.55 6.57 -83.54 -0.55 1.00 16 5 C -0.12 -1.93 9.29 -39.12 -0.36 -2.29 16 6 C -0.20 -3.49 9.93 -39.21 -0.39 -3.88 16 7 C 0.35 7.87 7.42 -154.87 -1.15 6.72 16 8 N -0.68 -16.28 5.37 -14.00 -0.08 -16.36 16 9 C 0.53 15.71 7.53 -14.91 -0.11 15.60 16 10 O -0.52 -17.37 13.13 5.13 0.07 -17.30 16 11 C -0.54 -15.37 9.31 -37.53 -0.35 -15.72 16 12 H 0.07 1.74 7.85 -52.48 -0.41 1.32 16 13 C 0.09 2.45 5.50 -17.35 -0.10 2.35 16 14 N -0.75 -22.54 11.73 55.55 0.65 -21.89 16 15 Si 0.91 19.97 29.56 -169.99 -5.02 14.94 16 16 H -0.26 -5.54 7.11 56.52 0.40 -5.14 16 17 H -0.28 -5.92 7.11 56.52 0.40 -5.52 16 18 H -0.28 -5.91 7.11 56.52 0.40 -5.51 16 19 N -0.43 -10.71 7.86 -12.18 -0.10 -10.80 16 20 C 0.07 1.41 10.38 -17.29 -0.18 1.23 16 21 H 0.04 0.37 8.14 -51.93 -0.42 -0.05 16 22 H 0.06 0.47 8.07 -51.93 -0.42 0.05 16 23 H 0.06 0.60 6.24 -51.92 -0.32 0.27 16 24 H 0.04 0.44 8.14 -51.93 -0.42 0.02 16 25 H 0.07 0.78 6.21 -51.93 -0.32 0.46 16 26 H 0.06 0.51 8.07 -51.93 -0.42 0.09 16 27 H 0.12 1.55 6.26 -52.49 -0.33 1.22 16 28 H 0.12 1.81 8.06 -52.48 -0.42 1.39 16 29 H 0.39 7.85 8.65 -40.82 -0.35 7.50 16 30 H 0.27 7.30 8.29 -40.82 -0.34 6.96 16 31 H 0.15 2.59 6.14 -52.48 -0.32 2.26 16 LS Contribution 268.86 15.07 4.05 4.05 Total: -1.00 -36.54 268.86 -6.33 -42.87 By element: Atomic # 1 Polarization: 8.65 SS G_CDS: -3.30 Total: 5.35 kcal Atomic # 6 Polarization: 10.26 SS G_CDS: -1.97 Total: 8.29 kcal Atomic # 7 Polarization: -58.04 SS G_CDS: -0.16 Total: -58.20 kcal Atomic # 8 Polarization: -17.37 SS G_CDS: 0.07 Total: -17.30 kcal Atomic # 14 Polarization: 19.97 SS G_CDS: -5.02 Total: 14.94 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -36.54 -6.33 -42.87 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000274620574.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.883 kcal (2) G-P(sol) polarization free energy of solvation -36.541 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.341 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.874 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.009 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds