Wall clock time and date at job start Sun Mar 29 2020 22:05:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37093 * 119.99986 * 2 1 4 4 H 1.08003 * 120.00668 * 142.75495 * 3 2 1 5 5 C 1.38954 * 120.00025 * 322.75689 * 3 2 1 6 6 N 1.31412 * 120.00309 * 158.54289 * 5 3 2 7 7 Si 1.86801 * 120.00054 * 338.53853 * 5 3 2 8 8 H 1.48498 * 109.46955 * 95.73880 * 7 5 3 9 9 H 1.48492 * 109.47298 * 215.74182 * 7 5 3 10 10 H 1.48505 * 109.46868 * 335.74099 * 7 5 3 11 11 C 1.34777 * 120.00079 * 180.27903 * 2 1 3 12 12 O 1.21299 * 119.99676 * 180.02562 * 11 2 1 13 13 C 1.50697 * 120.00378 * 359.97438 * 11 2 1 14 14 H 1.09000 * 115.54364 * 34.41653 * 13 11 2 15 15 C 1.53002 * 117.49911 * 248.75525 * 13 11 2 16 16 C 1.52990 * 117.50239 * 180.09110 * 13 11 2 17 17 Cl 1.80302 * 117.50034 * 214.97676 * 16 13 11 18 18 Cl 1.80298 * 117.50086 * 359.97403 * 16 13 11 19 19 H 1.08995 * 109.47214 * 264.77179 * 1 2 3 20 20 H 1.09000 * 109.47266 * 24.77580 * 1 2 3 21 21 H 1.09001 * 109.46938 * 144.76984 * 1 2 3 22 22 H 0.96995 * 120.00300 * 179.97438 * 6 5 3 23 23 H 1.08996 * 117.49807 * 359.97438 * 15 13 11 24 24 H 1.08996 * 117.49957 * 145.01822 * 15 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1504 1.1873 0.0000 4 1 3.0653 1.2828 0.5661 5 6 1.6682 2.2679 -0.7283 6 7 2.0457 3.4885 -0.4208 7 14 0.4834 1.9857 -2.1446 8 1 -0.9113 2.1604 -1.6655 9 1 0.7617 2.9651 -3.2255 10 1 0.6578 0.6072 -2.6686 11 6 2.1389 -1.1672 -0.0057 12 8 3.3519 -1.1671 -0.0052 13 6 1.3855 -2.4723 -0.0115 14 1 0.4477 -2.4712 -0.5669 15 6 1.4587 -3.3359 1.2494 16 6 2.2076 -3.7626 -0.0156 17 17 1.5506 -5.1653 -0.9385 18 17 4.0037 -3.6054 -0.0140 19 1 -0.3633 -0.0936 1.0233 20 1 -0.3634 0.9331 -0.4307 21 1 -0.3633 -0.8395 -0.5928 22 1 1.7093 4.2429 -0.9294 23 1 2.0521 -2.9602 2.0830 24 1 0.5693 -3.9033 1.5232 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000263686040.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:05:33 Heat of formation + Delta-G solvation = 6.896104 kcal Electronic energy + Delta-G solvation = -13025.290713 eV Core-core repulsion = 10413.882914 eV Total energy + Delta-G solvation = -2611.407800 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 237.006 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -39.24619 -36.91383 -35.73841 -35.03451 -34.47788 -32.05525 -26.67350 -25.79327 -22.96343 -22.01330 -18.77927 -17.29311 -16.99899 -15.74203 -15.20809 -14.57331 -14.06962 -13.30363 -12.81149 -12.64850 -12.57877 -12.31870 -12.19177 -11.78737 -11.57569 -10.87262 -10.84327 -10.61719 -10.43432 -10.17428 -9.95294 -9.63611 -9.08820 -8.38369 -7.79354 -6.44530 -4.02039 1.36440 2.45624 2.93984 3.06789 3.22455 3.23900 3.80550 4.08533 4.15782 4.50048 4.71560 4.94463 5.28371 5.35758 5.55334 5.76959 5.86641 6.07627 6.23730 7.47716 8.21318 8.43677 8.89649 9.24747 9.68846 10.67206 Molecular weight = 237.01amu Principal moments of inertia in cm(-1) A = 0.038941 B = 0.008280 C = 0.007601 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 718.860251 B = 3380.662264 C = 3683.059941 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.461 5.461 3 C -0.316 4.316 4 H 0.107 0.893 5 C 0.060 3.940 6 N -0.861 5.861 7 Si 0.880 3.120 8 H -0.275 1.275 9 H -0.287 1.287 10 H -0.264 1.264 11 C 0.482 3.518 12 O -0.536 6.536 13 C -0.148 4.148 14 H 0.134 0.866 15 C -0.125 4.125 16 C 0.022 3.978 17 Cl -0.110 7.110 18 Cl -0.056 7.056 19 H 0.054 0.946 20 H 0.067 0.933 21 H 0.054 0.946 22 H 0.275 0.725 23 H 0.123 0.877 24 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.843 -13.034 1.054 14.322 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.183 5.183 3 C -0.443 4.443 4 H 0.125 0.875 5 C -0.146 4.146 6 N -0.497 5.497 7 Si 0.707 3.293 8 H -0.202 1.202 9 H -0.214 1.214 10 H -0.188 1.188 11 C 0.268 3.732 12 O -0.415 6.415 13 C -0.171 4.171 14 H 0.152 0.848 15 C -0.163 4.163 16 C -0.030 4.030 17 Cl -0.083 7.083 18 Cl -0.029 7.029 19 H 0.072 0.928 20 H 0.085 0.915 21 H 0.072 0.928 22 H 0.085 0.915 23 H 0.141 0.859 24 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -5.115 -12.887 0.944 13.897 hybrid contribution -0.801 -0.080 -0.986 1.273 sum -5.916 -12.967 -0.042 14.253 Atomic orbital electron populations 1.22037 0.83409 1.01589 1.01121 1.43589 1.04038 1.05330 1.65369 1.19049 1.10345 0.85111 1.29761 0.87499 1.25373 0.97465 0.94767 0.97026 1.69743 1.43663 0.98119 1.38215 0.86929 0.80157 0.79152 0.83059 1.20244 1.21355 1.18822 1.19052 0.87697 0.83200 0.83244 1.90694 1.12708 1.85938 1.52191 1.23286 1.00576 0.91498 1.01690 0.84810 1.23857 1.01535 0.99305 0.91593 1.26364 0.84556 0.90261 1.01848 1.98720 1.85637 1.46951 1.77033 1.98774 1.08613 1.97072 1.98394 0.92753 0.91517 0.92783 0.91492 0.85895 0.86130 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 1.16 8.79 59.85 0.53 1.69 14 2 N -0.46 -10.83 2.58 -122.19 -0.32 -11.14 14 3 C -0.32 -8.77 9.37 -14.93 -0.14 -8.91 14 4 H 0.11 3.34 7.91 -52.48 -0.42 2.92 14 5 C 0.06 1.63 5.29 -17.47 -0.09 1.54 14 6 N -0.86 -24.59 13.96 55.50 0.77 -23.81 14 7 Si 0.88 20.20 24.96 -169.99 -4.24 15.96 14 8 H -0.28 -5.83 6.70 56.52 0.38 -5.45 14 9 H -0.29 -6.66 7.11 56.52 0.40 -6.26 14 10 H -0.26 -6.03 7.11 56.52 0.40 -5.63 14 11 C 0.48 10.73 7.41 -10.99 -0.08 10.64 14 12 O -0.54 -13.70 13.57 5.54 0.08 -13.63 14 13 C -0.15 -2.44 5.14 -91.78 -0.47 -2.91 14 14 H 0.13 1.90 6.51 -51.93 -0.34 1.56 14 15 C -0.12 -1.64 9.92 -26.69 -0.26 -1.90 14 16 C 0.02 0.34 3.62 -26.70 -0.10 0.24 14 17 Cl -0.11 -1.49 29.29 -51.86 -1.52 -3.01 14 18 Cl -0.06 -1.01 26.13 -51.86 -1.35 -2.36 14 19 H 0.05 0.88 8.14 -51.93 -0.42 0.46 14 20 H 0.07 1.34 3.44 -51.93 -0.18 1.16 14 21 H 0.05 0.83 6.22 -51.93 -0.32 0.51 14 22 H 0.27 7.24 8.31 -40.82 -0.34 6.90 14 23 H 0.12 1.67 8.14 -51.93 -0.42 1.24 14 24 H 0.12 1.18 8.14 -51.93 -0.42 0.75 14 LS Contribution 237.74 15.07 3.58 3.58 Total: -1.00 -30.55 237.74 -5.30 -35.85 By element: Atomic # 1 Polarization: -0.14 SS G_CDS: -1.68 Total: -1.82 kcal Atomic # 6 Polarization: 1.01 SS G_CDS: -0.62 Total: 0.39 kcal Atomic # 7 Polarization: -35.41 SS G_CDS: 0.46 Total: -34.95 kcal Atomic # 8 Polarization: -13.70 SS G_CDS: 0.08 Total: -13.63 kcal Atomic # 14 Polarization: 20.20 SS G_CDS: -4.24 Total: 15.96 kcal Atomic # 17 Polarization: -2.50 SS G_CDS: -2.87 Total: -5.37 kcal Total LS contribution 3.58 Total: 3.58 kcal Total: -30.55 -5.30 -35.85 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000263686040.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.748 kcal (2) G-P(sol) polarization free energy of solvation -30.551 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.197 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.301 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.852 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.896 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.16 seconds