Wall clock time and date at job start Sun Mar 29 2020 21:37:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.46506 * 119.99552 * 2 1 4 4 C 1.50705 * 109.46771 * 269.99608 * 3 2 1 5 5 H 1.07998 * 119.99857 * 0.02562 * 4 3 2 6 6 C 1.37880 * 119.99571 * 179.97438 * 4 3 2 7 7 N 1.31513 * 120.00354 * 0.02562 * 6 4 3 8 8 Si 1.86797 * 119.99729 * 180.02562 * 6 4 3 9 9 H 1.48491 * 109.47421 * 90.00148 * 8 6 4 10 10 H 1.48504 * 109.47211 * 210.00325 * 8 6 4 11 11 H 1.48508 * 109.46984 * 329.99886 * 8 6 4 12 12 C 1.34770 * 120.00363 * 179.97438 * 2 1 3 13 13 O 1.21575 * 119.99869 * 184.31083 * 12 2 1 14 14 C 1.47720 * 120.00230 * 4.30728 * 12 2 1 15 15 C 1.39647 * 120.12026 * 147.99762 * 14 12 2 16 16 C 1.37835 * 119.87841 * 180.30076 * 15 14 12 17 17 C 1.38655 * 120.12186 * 359.44607 * 16 15 14 18 18 F 1.35096 * 119.88633 * 180.25804 * 17 16 15 19 19 C 1.38661 * 120.23435 * 0.55002 * 17 16 15 20 20 C 1.37834 * 120.12225 * 359.73074 * 19 17 16 21 21 H 1.08996 * 109.47709 * 274.58369 * 1 2 3 22 22 H 1.08996 * 109.47659 * 34.59118 * 1 2 3 23 23 H 1.09007 * 109.46665 * 154.58991 * 1 2 3 24 24 H 1.08998 * 109.47195 * 29.99326 * 3 2 1 25 25 H 1.08996 * 109.46873 * 150.00031 * 3 2 1 26 26 H 0.96997 * 120.00317 * 180.02562 * 7 6 4 27 27 H 1.07996 * 120.05941 * 0.02562 * 15 14 12 28 28 H 1.08001 * 119.93968 * 179.69498 * 16 15 14 29 29 H 1.08002 * 119.93853 * 179.69781 * 19 17 16 30 30 H 1.07992 * 120.06194 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 6 2.4486 1.7038 -1.4209 5 1 2.0974 1.0961 -2.2417 6 6 3.1258 2.8781 -1.6728 7 7 3.5530 3.6183 -0.6733 8 14 3.4366 3.4176 -3.4340 9 1 2.3062 4.2601 -3.9004 10 1 4.6966 4.2009 -3.4967 11 1 3.5541 2.2205 -4.3050 12 6 2.1389 -1.1671 0.0005 13 8 3.3520 -1.1684 0.0797 14 6 1.4035 -2.4447 -0.0950 15 6 1.9822 -3.5398 -0.7399 16 6 1.2891 -4.7277 -0.8316 17 6 0.0242 -4.8400 -0.2749 18 9 -0.6487 -6.0081 -0.3630 19 6 -0.5550 -3.7558 0.3667 20 6 0.1269 -2.5615 0.4591 21 1 -0.3634 0.0821 1.0243 22 1 -0.3634 0.8459 -0.5834 23 1 -0.3633 -0.9283 -0.4410 24 1 1.6082 2.0285 0.5137 25 1 3.1498 1.1385 0.5138 26 1 4.0292 4.4446 -0.8505 27 1 2.9692 -3.4548 -1.1700 28 1 1.7338 -5.5738 -1.3345 29 1 -1.5425 -3.8471 0.7944 30 1 -0.3253 -1.7176 0.9586 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000019833651.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:37:45 Heat of formation + Delta-G solvation = -38.329991 kcal Electronic energy + Delta-G solvation = -16157.022519 eV Core-core repulsion = 13253.583137 eV Total energy + Delta-G solvation = -2903.439381 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 237.091 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -49.01696 -39.94399 -37.72626 -35.05393 -32.78539 -31.24789 -30.69234 -27.72257 -26.19437 -23.86852 -22.94083 -22.09459 -19.27553 -17.65653 -16.91976 -16.56850 -16.35232 -15.70989 -15.22519 -14.66061 -14.43586 -14.38440 -13.70571 -13.43941 -13.21844 -12.59942 -12.39578 -12.31279 -11.97727 -11.65090 -11.23936 -10.96322 -10.81381 -10.59442 -10.20025 -9.69039 -9.17607 -9.11984 -8.66946 -8.46927 -7.73336 -6.08069 -4.13365 0.83243 1.16757 3.13475 3.28239 3.35059 3.39195 3.71399 3.99991 4.12990 4.41598 4.64843 4.76187 4.91760 5.15208 5.26227 5.29271 5.54274 5.76780 5.82711 5.85315 5.99565 6.11098 6.16387 6.32330 6.74531 7.00214 7.38457 7.45377 7.87852 8.17890 8.29608 8.82607 8.98157 9.51904 11.00056 Molecular weight = 237.09amu Principal moments of inertia in cm(-1) A = 0.042305 B = 0.005575 C = 0.005428 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 661.697013 B = 5021.387183 C = 5157.549602 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.592 5.592 3 C 0.244 3.756 4 C -0.530 4.530 5 H 0.058 0.942 6 C 0.062 3.938 7 N -0.894 5.894 8 Si 0.899 3.101 9 H -0.280 1.280 10 H -0.285 1.285 11 H -0.274 1.274 12 C 0.545 3.455 13 O -0.535 6.535 14 C -0.127 4.127 15 C -0.039 4.039 16 C -0.162 4.162 17 C 0.107 3.893 18 F -0.141 7.141 19 C -0.164 4.164 20 C -0.076 4.076 21 H 0.051 0.949 22 H 0.074 0.926 23 H 0.075 0.925 24 H 0.035 0.965 25 H 0.047 0.953 26 H 0.264 0.736 27 H 0.143 0.857 28 H 0.138 0.862 29 H 0.138 0.862 30 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.519 -13.079 1.513 16.247 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.323 5.323 3 C 0.125 3.875 4 C -0.568 4.568 5 H 0.076 0.924 6 C -0.140 4.140 7 N -0.533 5.533 8 Si 0.727 3.273 9 H -0.206 1.206 10 H -0.210 1.210 11 H -0.199 1.199 12 C 0.332 3.668 13 O -0.414 6.414 14 C -0.131 4.131 15 C -0.057 4.057 16 C -0.181 4.181 17 C 0.088 3.912 18 F -0.120 7.120 19 C -0.183 4.183 20 C -0.094 4.094 21 H 0.069 0.931 22 H 0.092 0.908 23 H 0.093 0.907 24 H 0.053 0.947 25 H 0.065 0.935 26 H 0.074 0.926 27 H 0.161 0.839 28 H 0.156 0.844 29 H 0.156 0.844 30 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -8.799 -12.894 1.599 15.692 hybrid contribution -0.051 0.193 -1.024 1.044 sum -8.850 -12.701 0.575 15.491 Atomic orbital electron populations 1.22285 0.81748 1.03318 1.00584 1.48070 1.06201 1.07679 1.70341 1.19366 0.92724 0.77703 0.97724 1.21425 1.36801 1.06442 0.92179 0.92385 1.24934 0.95245 0.96329 0.97526 1.69928 1.38261 1.14280 1.30785 0.86479 0.77721 0.78615 0.84513 1.20592 1.21026 1.19874 1.18073 0.87206 0.83260 0.78263 1.90765 1.13380 1.87004 1.50224 1.20366 0.95318 0.95741 1.01632 1.21135 0.99592 0.90272 0.94745 1.21083 0.94035 0.99604 1.03381 1.17934 0.91453 0.81870 0.99960 1.91490 1.79926 1.46140 1.94434 1.21077 1.01848 0.92386 1.02984 1.21868 0.93074 0.97388 0.97082 0.93072 0.90756 0.90712 0.94710 0.93468 0.92634 0.83938 0.84372 0.84392 0.82869 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.98 8.80 59.84 0.53 1.51 16 2 N -0.59 -12.48 2.86 -184.12 -0.53 -13.01 16 3 C 0.24 6.32 5.22 -5.19 -0.03 6.29 16 4 C -0.53 -14.90 9.39 -34.44 -0.32 -15.23 16 5 H 0.06 1.63 7.81 -52.49 -0.41 1.22 16 6 C 0.06 1.76 5.46 -17.82 -0.10 1.66 16 7 N -0.89 -26.33 13.29 55.43 0.74 -25.60 16 8 Si 0.90 21.66 29.54 -169.99 -5.02 16.64 16 9 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 10 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 11 H -0.27 -6.59 7.11 56.52 0.40 -6.19 16 12 C 0.55 11.53 7.43 -12.39 -0.09 11.43 16 13 O -0.54 -13.57 16.31 5.30 0.09 -13.48 16 14 C -0.13 -2.05 5.47 -104.97 -0.57 -2.63 16 15 C -0.04 -0.56 9.60 -39.20 -0.38 -0.94 16 16 C -0.16 -1.96 10.01 -39.58 -0.40 -2.36 16 17 C 0.11 1.29 7.31 -39.27 -0.29 1.00 16 18 F -0.14 -1.69 17.26 2.25 0.04 -1.65 16 19 C -0.16 -1.83 10.01 -39.57 -0.40 -2.23 16 20 C -0.08 -0.96 7.43 -39.20 -0.29 -1.26 16 21 H 0.05 0.65 7.44 -51.93 -0.39 0.26 16 22 H 0.07 1.17 8.11 -51.93 -0.42 0.75 16 23 H 0.07 0.97 4.72 -51.92 -0.24 0.73 16 24 H 0.03 0.90 8.07 -51.93 -0.42 0.48 16 25 H 0.05 1.38 7.36 -51.93 -0.38 1.00 16 26 H 0.26 7.33 8.31 -40.82 -0.34 6.99 16 27 H 0.14 2.08 7.95 -52.49 -0.42 1.66 16 28 H 0.14 1.34 8.06 -52.49 -0.42 0.92 16 29 H 0.14 1.17 8.06 -52.49 -0.42 0.75 16 30 H 0.15 1.69 4.81 -52.49 -0.25 1.44 16 LS Contribution 267.39 15.07 4.03 4.03 Total: -1.00 -32.42 267.39 -5.90 -38.32 By element: Atomic # 1 Polarization: 0.39 SS G_CDS: -2.91 Total: -2.52 kcal Atomic # 6 Polarization: -0.40 SS G_CDS: -2.33 Total: -2.74 kcal Atomic # 7 Polarization: -38.82 SS G_CDS: 0.21 Total: -38.61 kcal Atomic # 8 Polarization: -13.57 SS G_CDS: 0.09 Total: -13.48 kcal Atomic # 9 Polarization: -1.69 SS G_CDS: 0.04 Total: -1.65 kcal Atomic # 14 Polarization: 21.66 SS G_CDS: -5.02 Total: 16.64 kcal Total LS contribution 4.03 Total: 4.03 kcal Total: -32.42 -5.90 -38.32 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000019833651.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.006 kcal (2) G-P(sol) polarization free energy of solvation -32.421 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.427 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.903 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.324 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.330 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds